RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 LTBP1Q14766 1721 aa18.74■□□□□ 0.59
MSRB3-209ENST00000540804 CALD1Q05682 793 aaKnown RBP18.74■□□□□ 0.59
MSRB3-209ENST00000540804 RTFDC1Q9BY42 306 aaPredicted RBP18.74■□□□□ 0.59
MSRB3-209ENST00000540804 TMX4Q9H1E5 349 aaPredicted RBP18.74■□□□□ 0.59
MSRB3-209ENST00000540804 IRS4O14654 1257 aaPredicted RBP18.73■□□□□ 0.59
MSRB3-209ENST00000540804 FMR1Q06787 632 aaKnown RBP eCLIP18.73■□□□□ 0.59
MSRB3-209ENST00000540804 GOLGA2Q08379 1002 aa18.73■□□□□ 0.59
MSRB3-209ENST00000540804 CREBZFQ9NS37 354 aa18.73■□□□□ 0.59
MSRB3-209ENST00000540804 SCN4AP35499 1836 aa18.72■□□□□ 0.59
MSRB3-209ENST00000540804 DDX60Q8IY21 1712 aaKnown RBP18.72■□□□□ 0.59
MSRB3-209ENST00000540804 CXCL9Q07325 125 aa18.72■□□□□ 0.59
MSRB3-209ENST00000540804 SF3B3Q15393 1217 aaKnown RBP18.72■□□□□ 0.59
MSRB3-209ENST00000540804 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
MSRB3-209ENST00000540804 TAF1P21675 1872 aa18.71■□□□□ 0.59
MSRB3-209ENST00000540804 ADAMTSL1Q8N6G6 1762 aa18.71■□□□□ 0.59
MSRB3-209ENST00000540804 ZNF316A6NFI3 1004 aaPredicted RBP18.71■□□□□ 0.59
MSRB3-209ENST00000540804 TRIM28Q13263 835 aaKnown RBP18.71■□□□□ 0.59
MSRB3-209ENST00000540804 PNMA8AQ86V59 439 aaPredicted RBP18.71■□□□□ 0.59
MSRB3-209ENST00000540804 WWC1Q8IX03 1113 aa18.71■□□□□ 0.59
MSRB3-209ENST00000540804 CNTROBQ8N137 903 aa18.71■□□□□ 0.59
MSRB3-209ENST00000540804 MRS2Q9HD23 443 aa18.71■□□□□ 0.59
MSRB3-209ENST00000540804 PCNTO95613 3336 aa18.71■□□□□ 0.59
MSRB3-209ENST00000540804 LMOD1P29536 600 aaPredicted RBP18.7■□□□□ 0.58
MSRB3-209ENST00000540804 ZEB1P37275 1124 aaPredicted RBP18.7■□□□□ 0.58
MSRB3-209ENST00000540804 KIAA2012Q0VF49 1180 aa18.7■□□□□ 0.58
MSRB3-209ENST00000540804 COL13A1Q5TAT6 717 aaPredicted RBP18.7■□□□□ 0.58
MSRB3-209ENST00000540804 SUPT20HQ8NEM7 779 aa18.7■□□□□ 0.58
MSRB3-209ENST00000540804 GPR101Q96P66 508 aaPredicted RBP18.7■□□□□ 0.58
MSRB3-209ENST00000540804 CCDC85AQ96PX6 553 aaPredicted RBP18.7■□□□□ 0.58
MSRB3-209ENST00000540804 SEC31BQ9NQW1 1179 aa18.7■□□□□ 0.58
MSRB3-209ENST00000540804 DUOX1Q9NRD9 1551 aa18.7■□□□□ 0.58
MSRB3-209ENST00000540804 ZNRF3Q9ULT6 936 aa18.7■□□□□ 0.58
MSRB3-209ENST00000540804 YDJCA8MPS7 323 aa18.69■□□□□ 0.58
MSRB3-209ENST00000540804 RAD17O75943 681 aa18.69■□□□□ 0.58
MSRB3-209ENST00000540804 HSPA1AP0DMV8 641 aaKnown RBP18.69■□□□□ 0.58
MSRB3-209ENST00000540804 HSPA1BP0DMV9 641 aaKnown RBP18.69■□□□□ 0.58
MSRB3-209ENST00000540804 GPSM2P81274 684 aa18.69■□□□□ 0.58
MSRB3-209ENST00000540804 CCDC30Q5VVM6 783 aa18.69■□□□□ 0.58
MSRB3-209ENST00000540804 SHTN1A0MZ66 631 aa18.68■□□□□ 0.58
MSRB3-209ENST00000540804 RIMBP2O15034 1052 aa18.68■□□□□ 0.58
MSRB3-209ENST00000540804 GMPSP49915 693 aaPredicted RBP18.68■□□□□ 0.58
MSRB3-209ENST00000540804 G2E3Q7L622 706 aa18.68■□□□□ 0.58
MSRB3-209ENST00000540804 ZBTB38Q8NAP3 1195 aaPredicted RBP18.68■□□□□ 0.58
MSRB3-209ENST00000540804 VPS33BQ9H267 617 aa18.68■□□□□ 0.58
MSRB3-209ENST00000540804 NSFL1CQ9UNZ2 370 aaKnown RBP18.68■□□□□ 0.58
MSRB3-209ENST00000540804 MAP3K2Q9Y2U5 619 aa18.68■□□□□ 0.58
MSRB3-209ENST00000540804 TMEM88BA6NKF7 163 aa18.67■□□□□ 0.58
MSRB3-209ENST00000540804 CCDC27Q2M243 656 aa18.67■□□□□ 0.58
MSRB3-209ENST00000540804 METTL22Q9BUU2 404 aaPredicted RBP18.67■□□□□ 0.58
MSRB3-209ENST00000540804 GPRC5DQ9NZD1 345 aa18.67■□□□□ 0.58
MSRB3-209ENST00000540804 POLLQ9UGP5 575 aa18.67■□□□□ 0.58
MSRB3-209ENST00000540804 ANP32CO43423 234 aa18.66■□□□□ 0.58
MSRB3-209ENST00000540804 IGKV5-2P06315 115 aa18.66■□□□□ 0.58
MSRB3-209ENST00000540804 TWISTNBQ3B726 338 aaPredicted RBP18.66■□□□□ 0.58
MSRB3-209ENST00000540804 CIAPIN1Q6FI81 312 aa18.66■□□□□ 0.58
MSRB3-209ENST00000540804 CCDC191Q8NCU4 936 aa18.66■□□□□ 0.58
MSRB3-209ENST00000540804 CWC25Q9NXE8 425 aaPredicted RBP18.66■□□□□ 0.58
MSRB3-209ENST00000540804 CNTNAP1P78357 1384 aa18.66■□□□□ 0.58
MSRB3-209ENST00000540804 PI4KAP2A4QPH2 592 aa18.65■□□□□ 0.58
MSRB3-209ENST00000540804 C6orf229H3BNL8 230 aa18.65■□□□□ 0.58
MSRB3-209ENST00000540804 TRAF5O00463 557 aa18.65■□□□□ 0.58
MSRB3-209ENST00000540804 PCCAP05165 728 aaPredicted RBP18.65■□□□□ 0.58
MSRB3-209ENST00000540804 VEGFBP49765 207 aa18.65■□□□□ 0.58
MSRB3-209ENST00000540804 RPS8P62241 208 aaKnown RBP18.65■□□□□ 0.58
MSRB3-209ENST00000540804 PI4KAP1Q8N8J0 262 aa18.65■□□□□ 0.58
MSRB3-209ENST00000540804 DBNDD1Q9H9R9 158 aa18.65■□□□□ 0.58
MSRB3-209ENST00000540804 KCNQ5Q9NR82 932 aa18.65■□□□□ 0.58
MSRB3-209ENST00000540804 DDX58O95786 925 aaKnown RBP18.64■□□□□ 0.57
MSRB3-209ENST00000540804 DOK7Q18PE1 504 aa18.64■□□□□ 0.57
MSRB3-209ENST00000540804 WASHC4Q2M389 1173 aa18.64■□□□□ 0.57
MSRB3-209ENST00000540804 USP50Q70EL3 339 aaPredicted RBP18.64■□□□□ 0.57
MSRB3-209ENST00000540804 TMC4Q7Z404 712 aa18.64■□□□□ 0.57
MSRB3-209ENST00000540804 ZBTB12Q9Y330 459 aaPredicted RBP18.64■□□□□ 0.57
MSRB3-209ENST00000540804 LRRC37AA6NMS7 1700 aa18.63■□□□□ 0.57
MSRB3-209ENST00000540804 PDE8AO60658 829 aa18.63■□□□□ 0.57
MSRB3-209ENST00000540804 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
MSRB3-209ENST00000540804 CWF19L2Q2TBE0 894 aaKnown RBP18.63■□□□□ 0.57
MSRB3-209ENST00000540804 KSR2Q6VAB6 950 aa18.63■□□□□ 0.57
MSRB3-209ENST00000540804 BCL2L13Q9BXK5 485 aa18.63■□□□□ 0.57
MSRB3-209ENST00000540804 ADARB2Q9NS39 739 aaKnown RBP18.63■□□□□ 0.57
MSRB3-209ENST00000540804 HIRAP54198 1017 aaPredicted RBP18.62■□□□□ 0.57
MSRB3-209ENST00000540804 TBC1D16Q8TBP0 767 aa18.62■□□□□ 0.57
MSRB3-209ENST00000540804 TRPM4Q8TD43 1214 aa18.62■□□□□ 0.57
MSRB3-209ENST00000540804 STK31Q9BXU1 1019 aa18.62■□□□□ 0.57
MSRB3-209ENST00000540804 SPINK5Q9NQ38 1064 aaPredicted RBP18.62■□□□□ 0.57
MSRB3-209ENST00000540804 FANCIQ9NVI1 1328 aa18.62■□□□□ 0.57
MSRB3-209ENST00000540804 WTIPA6NIX2 430 aaPredicted RBP18.61■□□□□ 0.57
MSRB3-209ENST00000540804 PSMD14O00487 310 aa18.61■□□□□ 0.57
MSRB3-209ENST00000540804 TNIP1Q15025 636 aa18.61■□□□□ 0.57
MSRB3-209ENST00000540804 IL16Q14005 1332 aa18.6■□□□□ 0.57
MSRB3-209ENST00000540804 ECE2O60344 883 aa18.6■□□□□ 0.57
MSRB3-209ENST00000540804 CCDC152Q4G0S7 254 aa18.6■□□□□ 0.57
MSRB3-209ENST00000540804 CST9Q5W186 159 aa18.6■□□□□ 0.57
MSRB3-209ENST00000540804 FAM9BQ8IZU0 186 aa18.6■□□□□ 0.57
MSRB3-209ENST00000540804 GLIS2Q9BZE0 524 aaPredicted RBP18.6■□□□□ 0.57
MSRB3-209ENST00000540804 CNOT7Q9UIV1 285 aaKnown RBP18.6■□□□□ 0.57
MSRB3-209ENST00000540804 ABT1Q9ULW3 272 aaKnown RBP18.6■□□□□ 0.57
MSRB3-209ENST00000540804 EGFRP00533 1210 aa18.59■□□□□ 0.57
MSRB3-209ENST00000540804 EXOSC9Q06265 439 aaKnown RBP18.59■□□□□ 0.57
MSRB3-209ENST00000540804 DEFB115Q30KQ5 88 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms