RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 DDNO94850 711 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-208ENST00000540683 HCLS1P14317 486 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-208ENST00000540683 SF3B3Q15393 1217 aaKnown RBP13.31□□□□□ -0.28
CDCA3-208ENST00000540683 TWISTNBQ3B726 338 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-208ENST00000540683 CCDC152Q4G0S7 254 aa13.31□□□□□ -0.28
CDCA3-208ENST00000540683 RTFDC1Q9BY42 306 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-208ENST00000540683 IRS4O14654 1257 aaPredicted RBP13.3□□□□□ -0.28
CDCA3-208ENST00000540683 PPIP5K2O43314 1243 aa13.3□□□□□ -0.28
CDCA3-208ENST00000540683 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
CDCA3-208ENST00000540683 TNIP1Q15025 636 aa13.3□□□□□ -0.28
CDCA3-208ENST00000540683 KSR2Q6VAB6 950 aa13.3□□□□□ -0.28
CDCA3-208ENST00000540683 C8orf58Q8NAV2 365 aa13.3□□□□□ -0.28
CDCA3-208ENST00000540683 EYA3Q99504 573 aa13.3□□□□□ -0.28
CDCA3-208ENST00000540683 METTL22Q9BUU2 404 aaPredicted RBP13.3□□□□□ -0.28
CDCA3-208ENST00000540683 ATP5J2-PTCD1G3V325 749 aa13.29□□□□□ -0.28
CDCA3-208ENST00000540683 FAM89AQ96GI7 184 aa13.29□□□□□ -0.28
CDCA3-208ENST00000540683 CDHR2Q9BYE9 1310 aa13.29□□□□□ -0.28
CDCA3-208ENST00000540683 PDE8AO60658 829 aa13.28□□□□□ -0.28
CDCA3-208ENST00000540683 MYD88Q99836 296 aa13.28□□□□□ -0.28
CDCA3-208ENST00000540683 TAF1DQ9H5J8 278 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-208ENST00000540683 ZNRF3Q9ULT6 936 aa13.28□□□□□ -0.28
CDCA3-208ENST00000540683 LAMB2P55268 1798 aa13.27□□□□□ -0.28
CDCA3-208ENST00000540683 TCERG1O14776 1098 aaKnown RBP13.27□□□□□ -0.29
CDCA3-208ENST00000540683 EPHX2P34913 555 aa13.27□□□□□ -0.29
CDCA3-208ENST00000540683 RPS8P62241 208 aaKnown RBP13.27□□□□□ -0.29
CDCA3-208ENST00000540683 KIAA2012Q0VF49 1180 aa13.27□□□□□ -0.29
CDCA3-208ENST00000540683 TSR2Q969E8 191 aaKnown RBP13.27□□□□□ -0.29
CDCA3-208ENST00000540683 KLRG1Q96E93 195 aa13.27□□□□□ -0.29
CDCA3-208ENST00000540683 CDC5LQ99459 802 aaKnown RBP13.27□□□□□ -0.29
CDCA3-208ENST00000540683 PHAXQ9H814 394 aaKnown RBP13.27□□□□□ -0.29
CDCA3-208ENST00000540683 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
CDCA3-208ENST00000540683 MAP3K2Q9Y2U5 619 aa13.27□□□□□ -0.29
CDCA3-208ENST00000540683 GJA3Q9Y6H8 435 aa13.27□□□□□ -0.29
CDCA3-208ENST00000540683 SNED1Q8TER0 1413 aa13.27□□□□□ -0.29
CDCA3-208ENST00000540683 POTECB2RU33 542 aa13.26□□□□□ -0.29
CDCA3-208ENST00000540683 G3V3G9 751 aa13.26□□□□□ -0.29
CDCA3-208ENST00000540683 EAPPQ56P03 285 aaPredicted RBP13.26□□□□□ -0.29
CDCA3-208ENST00000540683 DCAF8Q5TAQ9 597 aa13.26□□□□□ -0.29
CDCA3-208ENST00000540683 OLFM4Q6UX06 510 aa13.26□□□□□ -0.29
CDCA3-208ENST00000540683 USP50Q70EL3 339 aaPredicted RBP13.26□□□□□ -0.29
CDCA3-208ENST00000540683 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
CDCA3-208ENST00000540683 DDX60Q8IY21 1712 aaKnown RBP13.25□□□□□ -0.29
CDCA3-208ENST00000540683 ZNF541Q9H0D2 1346 aa13.25□□□□□ -0.29
CDCA3-208ENST00000540683 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
CDCA3-208ENST00000540683 PI4KAP2A4QPH2 592 aa13.25□□□□□ -0.29
CDCA3-208ENST00000540683 AOC3Q16853 763 aa13.25□□□□□ -0.29
CDCA3-208ENST00000540683 WASHC4Q2M389 1173 aa13.25□□□□□ -0.29
CDCA3-208ENST00000540683 CCDC184Q52MB2 194 aa13.25□□□□□ -0.29
CDCA3-208ENST00000540683 C3orf67Q6ZVT6 689 aa13.25□□□□□ -0.29
CDCA3-208ENST00000540683 FAM9BQ8IZU0 186 aa13.25□□□□□ -0.29
CDCA3-208ENST00000540683 PI4KAP1Q8N8J0 262 aa13.25□□□□□ -0.29
CDCA3-208ENST00000540683 NSFL1CQ9UNZ2 370 aaKnown RBP13.25□□□□□ -0.29
CDCA3-208ENST00000540683 FKBP5Q13451 457 aaPredicted RBP13.24□□□□□ -0.29
CDCA3-208ENST00000540683 CIAPIN1Q6FI81 312 aa13.24□□□□□ -0.29
CDCA3-208ENST00000540683 ANKRD18AQ8IVF6 992 aa13.24□□□□□ -0.29
CDCA3-208ENST00000540683 DNAJC5GQ8N7S2 189 aa13.24□□□□□ -0.29
CDCA3-208ENST00000540683 TSPYL6Q8N831 410 aa13.24□□□□□ -0.29
CDCA3-208ENST00000540683 ANKIB1Q9P2G1 1089 aa13.24□□□□□ -0.29
CDCA3-208ENST00000540683 LRRC37AA6NMS7 1700 aa13.23□□□□□ -0.29
CDCA3-208ENST00000540683 C6orf229H3BNL8 230 aa13.23□□□□□ -0.29
CDCA3-208ENST00000540683 FLIIQ13045 1269 aa13.23□□□□□ -0.29
CDCA3-208ENST00000540683 ZNF428Q96B54 188 aa13.23□□□□□ -0.29
CDCA3-208ENST00000540683 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
CDCA3-208ENST00000540683 ZC3H12CQ9C0D7 883 aaKnown RBP13.23□□□□□ -0.29
CDCA3-208ENST00000540683 ADARB2Q9NS39 739 aaKnown RBP13.23□□□□□ -0.29
CDCA3-208ENST00000540683 PODXL2Q9NZ53 605 aa13.23□□□□□ -0.29
CDCA3-208ENST00000540683 H7C1D1 291 aa13.22□□□□□ -0.29
CDCA3-208ENST00000540683 RPS12P25398 132 aaKnown RBP13.22□□□□□ -0.29
CDCA3-208ENST00000540683 CTSWP56202 376 aa13.22□□□□□ -0.29
CDCA3-208ENST00000540683 RTL5Q5HYW3 569 aaPredicted RBP13.22□□□□□ -0.29
CDCA3-208ENST00000540683 JMYQ8N9B5 988 aa13.22□□□□□ -0.29
CDCA3-208ENST00000540683 LINS1Q8NG48 757 aa13.22□□□□□ -0.29
CDCA3-208ENST00000540683 ZC3H15Q8WU90 426 aaKnown RBP13.22□□□□□ -0.29
CDCA3-208ENST00000540683 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
CDCA3-208ENST00000540683 GGA1Q9UJY5 639 aa13.22□□□□□ -0.29
CDCA3-208ENST00000540683 RTL9Q8NET4 1388 aa13.21□□□□□ -0.29
CDCA3-208ENST00000540683 TMEM88BA6NKF7 163 aa13.21□□□□□ -0.29
CDCA3-208ENST00000540683 NEURL1BA8MQ27 555 aa13.21□□□□□ -0.29
CDCA3-208ENST00000540683 IGHMBP2P38935 993 aaKnown RBP13.21□□□□□ -0.29
CDCA3-208ENST00000540683 CNTROBQ8N137 903 aa13.21□□□□□ -0.29
CDCA3-208ENST00000540683 DPF2Q92785 391 aa13.21□□□□□ -0.29
CDCA3-208ENST00000540683 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.29
CDCA3-208ENST00000540683 GPRC5DQ9NZD1 345 aa13.21□□□□□ -0.29
CDCA3-208ENST00000540683 MYH3P11055 1940 aa13.21□□□□□ -0.3
CDCA3-208ENST00000540683 XDHP47989 1333 aa13.2□□□□□ -0.3
CDCA3-208ENST00000540683 VAMP4O75379 141 aa13.2□□□□□ -0.3
CDCA3-208ENST00000540683 ATP2B4P23634 1241 aa13.2□□□□□ -0.3
CDCA3-208ENST00000540683 MMP14P50281 582 aa13.2□□□□□ -0.3
CDCA3-208ENST00000540683 EXOSC9Q06265 439 aaKnown RBP13.2□□□□□ -0.3
CDCA3-208ENST00000540683 CXCL9Q07325 125 aa13.2□□□□□ -0.3
CDCA3-208ENST00000540683 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
CDCA3-208ENST00000540683 PASKQ96RG2 1323 aa13.19□□□□□ -0.3
CDCA3-208ENST00000540683 E9PSI1 815 aa13.19□□□□□ -0.3
CDCA3-208ENST00000540683 SCNN1DP51172 638 aa13.19□□□□□ -0.3
CDCA3-208ENST00000540683 GCKRQ14397 625 aa13.19□□□□□ -0.3
CDCA3-208ENST00000540683 MPHOSPH8Q99549 860 aa13.19□□□□□ -0.3
CDCA3-208ENST00000540683 PLA2G12BQ9BX93 195 aa13.19□□□□□ -0.3
CDCA3-208ENST00000540683 ANKRD2Q9GZV1 360 aa13.19□□□□□ -0.3
CDCA3-208ENST00000540683 BSDC1Q9NW68 430 aaPredicted RBP13.19□□□□□ -0.3
CDCA3-208ENST00000540683 H7C1W4 665 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms