RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 UBE3BQ7Z3V4 1068 aa23.3■■□□□ 1.32
SNRPA1-203ENST00000540017 CELF1Q92879 486 aaKnown RBP23.3■■□□□ 1.32
SNRPA1-203ENST00000540017 ATP6V0A2Q9Y487 856 aa23.3■■□□□ 1.32
SNRPA1-203ENST00000540017 BBOX1O75936 387 aa23.29■■□□□ 1.32
SNRPA1-203ENST00000540017 ALDH1L2Q3SY69 923 aa23.29■■□□□ 1.32
SNRPA1-203ENST00000540017 SEC31BQ9NQW1 1179 aa23.29■■□□□ 1.32
SNRPA1-203ENST00000540017 ZNF277Q9NRM2 450 aaPredicted RBP23.29■■□□□ 1.32
SNRPA1-203ENST00000540017 TIAM2Q8IVF5 1701 aa23.28■■□□□ 1.32
SNRPA1-203ENST00000540017 CT47B1P0C2W7 299 aaPredicted RBP23.28■■□□□ 1.32
SNRPA1-203ENST00000540017 CC2D2BQ6DHV5 1058 aa23.28■■□□□ 1.32
SNRPA1-203ENST00000540017 CCDC85AQ96PX6 553 aaPredicted RBP23.28■■□□□ 1.32
SNRPA1-203ENST00000540017 GPBP1L1Q9HC44 474 aaPredicted RBP23.28■■□□□ 1.32
SNRPA1-203ENST00000540017 DICER1Q9UPY3 1922 aaKnown RBP23.27■■□□□ 1.32
SNRPA1-203ENST00000540017 HSP90B1P14625 803 aaKnown RBP23.27■■□□□ 1.32
SNRPA1-203ENST00000540017 SLC4A10Q6U841 1118 aa23.27■■□□□ 1.32
SNRPA1-203ENST00000540017 PSMD1Q99460 953 aa23.27■■□□□ 1.32
SNRPA1-203ENST00000540017 SMC4Q9NTJ3 1288 aa23.27■■□□□ 1.32
SNRPA1-203ENST00000540017 CTSWP56202 376 aa23.26■■□□□ 1.31
SNRPA1-203ENST00000540017 SP8Q8IXZ3 490 aa23.26■■□□□ 1.31
SNRPA1-203ENST00000540017 TTLL11Q8NHH1 800 aa23.25■■□□□ 1.31
SNRPA1-203ENST00000540017 PTPRCP08575 1304 aa23.25■■□□□ 1.31
SNRPA1-203ENST00000540017 ZC3H4Q9UPT8 1303 aaKnown RBP23.25■■□□□ 1.31
SNRPA1-203ENST00000540017 RARSP54136 660 aaKnown RBP23.24■■□□□ 1.31
SNRPA1-203ENST00000540017 CCDC152Q4G0S7 254 aa23.24■■□□□ 1.31
SNRPA1-203ENST00000540017 ZBED9Q6R2W3 1325 aa23.24■■□□□ 1.31
SNRPA1-203ENST00000540017 IARSP41252 1262 aaKnown RBP23.23■■□□□ 1.31
SNRPA1-203ENST00000540017 RPS8P62241 208 aaKnown RBP23.23■■□□□ 1.31
SNRPA1-203ENST00000540017 GRIPAP1Q4V328 841 aa23.23■■□□□ 1.31
SNRPA1-203ENST00000540017 PLA2G12BQ9BX93 195 aa23.23■■□□□ 1.31
SNRPA1-203ENST00000540017 SRCIN1Q9C0H9 1055 aa23.23■■□□□ 1.31
SNRPA1-203ENST00000540017 NMRK2Q9NPI5 230 aa23.23■■□□□ 1.31
SNRPA1-203ENST00000540017 COL4A5P29400 1685 aa23.22■■□□□ 1.31
SNRPA1-203ENST00000540017 LRRC37AA6NMS7 1700 aa23.22■■□□□ 1.31
SNRPA1-203ENST00000540017 ALDH1L1O75891 902 aa23.22■■□□□ 1.31
SNRPA1-203ENST00000540017 GREM2Q9H772 168 aa23.22■■□□□ 1.31
SNRPA1-203ENST00000540017 MYH3P11055 1940 aa23.21■■□□□ 1.31
SNRPA1-203ENST00000540017 BRPF1P55201 1214 aaPredicted RBP23.21■■□□□ 1.31
SNRPA1-203ENST00000540017 TMC4Q7Z404 712 aa23.21■■□□□ 1.31
SNRPA1-203ENST00000540017 GLTPD2A6NH11 291 aa23.2■■□□□ 1.3
SNRPA1-203ENST00000540017 GRM8O00222 908 aa23.2■■□□□ 1.3
SNRPA1-203ENST00000540017 KIF3CO14782 793 aa23.2■■□□□ 1.3
SNRPA1-203ENST00000540017 MPNDQ8N594 471 aa23.2■■□□□ 1.3
SNRPA1-203ENST00000540017 RTFDC1Q9BY42 306 aaPredicted RBP23.2■■□□□ 1.3
SNRPA1-203ENST00000540017 TMX4Q9H1E5 349 aaPredicted RBP23.2■■□□□ 1.3
SNRPA1-203ENST00000540017 NOB1Q9ULX3 412 aaKnown RBP23.2■■□□□ 1.3
SNRPA1-203ENST00000540017 DUOX1Q9NRD9 1551 aa23.19■■□□□ 1.3
SNRPA1-203ENST00000540017 CSF1RP07333 972 aa23.19■■□□□ 1.3
SNRPA1-203ENST00000540017 FOXO4P98177 505 aa23.19■■□□□ 1.3
SNRPA1-203ENST00000540017 DPP8Q6V1X1 898 aaPredicted RBP23.19■■□□□ 1.3
SNRPA1-203ENST00000540017 RTL9Q8NET4 1388 aa23.18■■□□□ 1.3
SNRPA1-203ENST00000540017 KDM2BQ8NHM5 1336 aa23.18■■□□□ 1.3
SNRPA1-203ENST00000540017 EPHA10Q5JZY3 1008 aa23.18■■□□□ 1.3
SNRPA1-203ENST00000540017 GPSM2P81274 684 aa23.17■■□□□ 1.3
SNRPA1-203ENST00000540017 AOC3Q16853 763 aa23.17■■□□□ 1.3
SNRPA1-203ENST00000540017 RRAGCQ9HB90 399 aa23.17■■□□□ 1.3
SNRPA1-203ENST00000540017 C9orf78Q9NZ63 289 aaPredicted RBP23.17■■□□□ 1.3
SNRPA1-203ENST00000540017 ZNF541Q9H0D2 1346 aa23.16■■□□□ 1.3
SNRPA1-203ENST00000540017 BCAR3O75815 825 aa23.16■■□□□ 1.3
SNRPA1-203ENST00000540017 DDNO94850 711 aaPredicted RBP23.16■■□□□ 1.3
SNRPA1-203ENST00000540017 NBPF7P0C2Y1 421 aaPredicted RBP23.16■■□□□ 1.3
SNRPA1-203ENST00000540017 FAM161AQ3B820 660 aa23.16■■□□□ 1.3
SNRPA1-203ENST00000540017 ANKRD18AQ8IVF6 992 aa23.16■■□□□ 1.3
SNRPA1-203ENST00000540017 NSFL1CQ9UNZ2 370 aaKnown RBP23.16■■□□□ 1.3
SNRPA1-203ENST00000540017 UTYO14607 1347 aa23.15■■□□□ 1.3
SNRPA1-203ENST00000540017 FZD9O00144 591 aa23.15■■□□□ 1.3
SNRPA1-203ENST00000540017 PPIP5K2O43314 1243 aa23.15■■□□□ 1.3
SNRPA1-203ENST00000540017 DPY19L2Q6NUT2 758 aa23.15■■□□□ 1.3
SNRPA1-203ENST00000540017 LARGE2Q8N3Y3 721 aa23.15■■□□□ 1.3
SNRPA1-203ENST00000540017 KAZALD1Q96I82 304 aa23.15■■□□□ 1.3
SNRPA1-203ENST00000540017 POLLQ9UGP5 575 aa23.15■■□□□ 1.3
SNRPA1-203ENST00000540017 LTBP1Q14766 1721 aa23.15■■□□□ 1.3
SNRPA1-203ENST00000540017 POTECB2RU33 542 aa23.14■■□□□ 1.29
SNRPA1-203ENST00000540017 ITGA6P23229 1130 aa23.14■■□□□ 1.29
SNRPA1-203ENST00000540017 SUPT20HQ8NEM7 779 aa23.14■■□□□ 1.29
SNRPA1-203ENST00000540017 SUCLG2Q96I99 432 aa23.14■■□□□ 1.29
SNRPA1-203ENST00000540017 CDC5LQ99459 802 aaKnown RBP23.14■■□□□ 1.29
SNRPA1-203ENST00000540017 SPEF2Q9C093 1822 aa23.13■■□□□ 1.29
SNRPA1-203ENST00000540017 LMBR1LQ6UX01 489 aa23.13■■□□□ 1.29
SNRPA1-203ENST00000540017 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
SNRPA1-203ENST00000540017 C1QTNF8P60827 252 aa23.12■■□□□ 1.29
SNRPA1-203ENST00000540017 KIAA2012Q0VF49 1180 aa23.12■■□□□ 1.29
SNRPA1-203ENST00000540017 GPR101Q96P66 508 aaPredicted RBP23.12■■□□□ 1.29
SNRPA1-203ENST00000540017 USP44Q9H0E7 712 aa23.12■■□□□ 1.29
SNRPA1-203ENST00000540017 VPS33BQ9H267 617 aa23.12■■□□□ 1.29
SNRPA1-203ENST00000540017 BSDC1Q9NW68 430 aaPredicted RBP23.12■■□□□ 1.29
SNRPA1-203ENST00000540017 PODXL2Q9NZ53 605 aa23.12■■□□□ 1.29
SNRPA1-203ENST00000540017 WDR90Q96KV7 1748 aa23.11■■□□□ 1.29
SNRPA1-203ENST00000540017 TBC1D16Q8TBP0 767 aa23.11■■□□□ 1.29
SNRPA1-203ENST00000540017 API5Q9BZZ5 524 aaKnown RBP23.11■■□□□ 1.29
SNRPA1-203ENST00000540017 TNNQ9UQP3 1299 aa23.11■■□□□ 1.29
SNRPA1-203ENST00000540017 KIF16BQ96L93 1317 aa23.1■■□□□ 1.29
SNRPA1-203ENST00000540017 WTIPA6NIX2 430 aaPredicted RBP23.1■■□□□ 1.29
SNRPA1-203ENST00000540017 C6orf229H3BNL8 230 aa23.1■■□□□ 1.29
SNRPA1-203ENST00000540017 NIM1KQ8IY84 436 aa23.1■■□□□ 1.29
SNRPA1-203ENST00000540017 ARHGAP45Q92619 1136 aa23.1■■□□□ 1.29
SNRPA1-203ENST00000540017 MINPP1Q9UNW1 487 aa23.1■■□□□ 1.29
SNRPA1-203ENST00000540017 ANKIB1Q9P2G1 1089 aa23.09■■□□□ 1.29
SNRPA1-203ENST00000540017 CHMP3Q9Y3E7 222 aa23.09■■□□□ 1.29
SNRPA1-203ENST00000540017 ANKRD18BA2A2Z9 1011 aa23.08■■□□□ 1.29
SNRPA1-203ENST00000540017 RIMBP2O15034 1052 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms