RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 SNRKQ9NRH2 765 aa12.29□□□□□ -0.44
SPARC-209ENST00000539687 DDIT3P35638 169 aa12.28□□□□□ -0.44
SPARC-209ENST00000539687 RNF20Q5VTR2 975 aa12.28□□□□□ -0.44
SPARC-209ENST00000539687 FSD1Q9BTV5 496 aa12.28□□□□□ -0.44
SPARC-209ENST00000539687 RREB1Q92766 1687 aa12.28□□□□□ -0.44
SPARC-209ENST00000539687 ABCC12Q96J65 1359 aa12.28□□□□□ -0.44
SPARC-209ENST00000539687 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
SPARC-209ENST00000539687 ANKRD36CQ5JPF3 1778 aa12.28□□□□□ -0.44
SPARC-209ENST00000539687 TFCP2Q12800 502 aa12.27□□□□□ -0.45
SPARC-209ENST00000539687 IFIT5Q13325 482 aaKnown RBP12.27□□□□□ -0.45
SPARC-209ENST00000539687 PARP10Q53GL7 1025 aa12.27□□□□□ -0.45
SPARC-209ENST00000539687 TAF7LQ5H9L4 462 aa12.27□□□□□ -0.45
SPARC-209ENST00000539687 DZIP3Q86Y13 1208 aaKnown RBP12.27□□□□□ -0.45
SPARC-209ENST00000539687 CCDC8Q9H0W5 538 aaPredicted RBP12.27□□□□□ -0.45
SPARC-209ENST00000539687 CCDC87Q9NVE4 849 aa12.27□□□□□ -0.45
SPARC-209ENST00000539687 ZNF652Q9Y2D9 606 aa12.27□□□□□ -0.45
SPARC-209ENST00000539687 ZNF330Q9Y3S2 320 aaPredicted RBP12.27□□□□□ -0.45
SPARC-209ENST00000539687 SPEF2Q9C093 1822 aa12.26□□□□□ -0.45
SPARC-209ENST00000539687 GOLGA6L22H0YM25 854 aa12.26□□□□□ -0.45
SPARC-209ENST00000539687 CSF1RP07333 972 aa12.26□□□□□ -0.45
SPARC-209ENST00000539687 ZKSCAN1P17029 563 aaPredicted RBP12.26□□□□□ -0.45
SPARC-209ENST00000539687 HMGB2P26583 209 aaKnown RBP12.26□□□□□ -0.45
SPARC-209ENST00000539687 NEK4P51957 841 aa12.26□□□□□ -0.45
SPARC-209ENST00000539687 CWC27Q6UX04 472 aaKnown RBP12.26□□□□□ -0.45
SPARC-209ENST00000539687 NLRP10Q86W26 655 aa12.26□□□□□ -0.45
SPARC-209ENST00000539687 FNBP4Q8N3X1 1017 aaPredicted RBP12.26□□□□□ -0.45
SPARC-209ENST00000539687 INTS4Q96HW7 963 aaKnown RBP12.26□□□□□ -0.45
SPARC-209ENST00000539687 NGLY1Q96IV0 654 aa12.26□□□□□ -0.45
SPARC-209ENST00000539687 HAUS7Q99871 368 aa12.26□□□□□ -0.45
SPARC-209ENST00000539687 HMG20BQ9P0W2 317 aa12.26□□□□□ -0.45
SPARC-209ENST00000539687 CEP126Q9P2H0 1117 aa12.26□□□□□ -0.45
SPARC-209ENST00000539687 LOC102724428A0A0B4J2F2 783 aa12.25□□□□□ -0.45
SPARC-209ENST00000539687 FRAT2O75474 233 aaPredicted RBP12.25□□□□□ -0.45
SPARC-209ENST00000539687 ATP6V1AP38606 617 aa12.25□□□□□ -0.45
SPARC-209ENST00000539687 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
SPARC-209ENST00000539687 SIK1P57059 783 aa12.25□□□□□ -0.45
SPARC-209ENST00000539687 RAB3GAP1Q15042 981 aa12.25□□□□□ -0.45
SPARC-209ENST00000539687 MARCH10Q8NA82 808 aaPredicted RBP12.25□□□□□ -0.45
SPARC-209ENST00000539687 TM6SF1Q9BZW5 370 aa12.25□□□□□ -0.45
SPARC-209ENST00000539687 LSG1Q9H089 658 aaKnown RBP12.25□□□□□ -0.45
SPARC-209ENST00000539687 DBNLQ9UJU6 430 aaKnown RBP12.25□□□□□ -0.45
SPARC-209ENST00000539687 ZBTB1Q9Y2K1 713 aa12.25□□□□□ -0.45
SPARC-209ENST00000539687 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
SPARC-209ENST00000539687 ZNF609O15014 1411 aa12.25□□□□□ -0.45
SPARC-209ENST00000539687 ANKRD18BA2A2Z9 1011 aa12.24□□□□□ -0.45
SPARC-209ENST00000539687 PDE8AO60658 829 aa12.24□□□□□ -0.45
SPARC-209ENST00000539687 MAP4K4O95819 1239 aaPredicted RBP12.24□□□□□ -0.45
SPARC-209ENST00000539687 PDIA4P13667 645 aaKnown RBP12.24□□□□□ -0.45
SPARC-209ENST00000539687 PSMA5P28066 241 aa12.24□□□□□ -0.45
SPARC-209ENST00000539687 CCDC158Q5M9N0 1113 aa12.24□□□□□ -0.45
SPARC-209ENST00000539687 CCDC171Q6TFL3 1326 aa12.24□□□□□ -0.45
SPARC-209ENST00000539687 KLHDC4Q8TBB5 520 aa12.24□□□□□ -0.45
SPARC-209ENST00000539687 KCNB2Q92953 911 aa12.24□□□□□ -0.45
SPARC-209ENST00000539687 ARXQ96QS3 562 aa12.24□□□□□ -0.45
SPARC-209ENST00000539687 BOLA2Q9H3K6 86 aa12.24□□□□□ -0.45
SPARC-209ENST00000539687 BCL9LQ86UU0 1499 aa12.23□□□□□ -0.45
SPARC-209ENST00000539687 MCM4P33991 863 aa12.23□□□□□ -0.45
SPARC-209ENST00000539687 CTSWP56202 376 aa12.23□□□□□ -0.45
SPARC-209ENST00000539687 KRT32Q14532 448 aa12.23□□□□□ -0.45
SPARC-209ENST00000539687 SKOR2Q2VWA4 1001 aaPredicted RBP12.23□□□□□ -0.45
SPARC-209ENST00000539687 ATG9AQ7Z3C6 839 aa12.23□□□□□ -0.45
SPARC-209ENST00000539687 ZNF34Q8IZ26 560 aa12.23□□□□□ -0.45
SPARC-209ENST00000539687 SPRYD3Q8NCJ5 442 aa12.23□□□□□ -0.45
SPARC-209ENST00000539687 JARID2Q92833 1246 aaPredicted RBP12.23□□□□□ -0.45
SPARC-209ENST00000539687 SLC4A9Q96Q91 983 aa12.23□□□□□ -0.45
SPARC-209ENST00000539687 TRMT112Q9UI30 125 aaKnown RBP12.23□□□□□ -0.45
SPARC-209ENST00000539687 MED23Q9ULK4 1368 aa12.22□□□□□ -0.45
SPARC-209ENST00000539687 SH3TC1Q8TE82 1336 aa12.22□□□□□ -0.45
SPARC-209ENST00000539687 IRS4O14654 1257 aaPredicted RBP12.22□□□□□ -0.45
SPARC-209ENST00000539687 CD2BP2O95400 341 aaKnown RBP12.22□□□□□ -0.45
SPARC-209ENST00000539687 ZFYP08048 801 aaPredicted RBP12.22□□□□□ -0.45
SPARC-209ENST00000539687 CRKLP46109 303 aaKnown RBP12.22□□□□□ -0.45
SPARC-209ENST00000539687 KCNJ4P48050 445 aa12.22□□□□□ -0.45
SPARC-209ENST00000539687 CUL4AQ13619 759 aa12.22□□□□□ -0.45
SPARC-209ENST00000539687 CLEC4GQ6UXB4 293 aa12.22□□□□□ -0.45
SPARC-209ENST00000539687 CLEC17AQ6ZS10 378 aa12.22□□□□□ -0.45
SPARC-209ENST00000539687 KBTBD3Q8NAB2 608 aa12.22□□□□□ -0.45
SPARC-209ENST00000539687 DBNDD2Q9BQY9 259 aa12.22□□□□□ -0.45
SPARC-209ENST00000539687 TLR7Q9NYK1 1049 aaKnown RBP12.22□□□□□ -0.45
SPARC-209ENST00000539687 RTL9Q8NET4 1388 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 CNTNAP4Q9C0A0 1308 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 A0A0G2JS52 829 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 A0A1B0GUL7 405 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 DEKP35659 375 aaKnown RBP12.21□□□□□ -0.45
SPARC-209ENST00000539687 NMIQ13287 307 aaPredicted RBP12.21□□□□□ -0.45
SPARC-209ENST00000539687 GSE1Q14687 1217 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 ANKRD1Q15327 319 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 GORABQ5T7V8 394 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 INTS5Q6P9B9 1019 aaKnown RBP12.21□□□□□ -0.45
SPARC-209ENST00000539687 MAP4K1Q92918 833 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 FAM89AQ96GI7 184 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 ZSCAN31Q96LW9 406 aaPredicted RBP12.21□□□□□ -0.45
SPARC-209ENST00000539687 NEUROD6Q96NK8 337 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 UTP14AQ9BVJ6 771 aaKnown RBP12.21□□□□□ -0.45
SPARC-209ENST00000539687 HELLSQ9NRZ9 838 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 USP21Q9UK80 565 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
SPARC-209ENST00000539687 SNX14Q9Y5W7 946 aa12.21□□□□□ -0.45
SPARC-209ENST00000539687 MROH5Q6ZUA9 1318 aa12.2□□□□□ -0.46
SPARC-209ENST00000539687 IFIT1P09914 478 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms