RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 A0A1B0GUL6 1792 aa17.51■□□□□ 0.39
CD9-208ENST00000538834 WDR90Q96KV7 1748 aa17.5■□□□□ 0.39
CD9-208ENST00000538834 F6X3S4 739 aa17.5■□□□□ 0.39
CD9-208ENST00000538834 PDE8AO60658 829 aa17.5■□□□□ 0.39
CD9-208ENST00000538834 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
CD9-208ENST00000538834 NEXNQ0ZGT2 675 aa17.5■□□□□ 0.39
CD9-208ENST00000538834 GRAPQ13588 217 aa17.5■□□□□ 0.39
CD9-208ENST00000538834 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
CD9-208ENST00000538834 TAOK3Q9H2K8 898 aa17.5■□□□□ 0.39
CD9-208ENST00000538834 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
CD9-208ENST00000538834 COL4A5P29400 1685 aa17.5■□□□□ 0.39
CD9-208ENST00000538834 RTL9Q8NET4 1388 aa17.5■□□□□ 0.39
CD9-208ENST00000538834 PTPRCP08575 1304 aa17.49■□□□□ 0.39
CD9-208ENST00000538834 SP8Q8IXZ3 490 aa17.49■□□□□ 0.39
CD9-208ENST00000538834 RTFDC1Q9BY42 306 aaPredicted RBP17.49■□□□□ 0.39
CD9-208ENST00000538834 RNF181Q9P0P0 153 aa17.49■□□□□ 0.39
CD9-208ENST00000538834 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
CD9-208ENST00000538834 ZBED9Q6R2W3 1325 aa17.48■□□□□ 0.39
CD9-208ENST00000538834 PPEF1O14829 653 aaPredicted RBP17.48■□□□□ 0.39
CD9-208ENST00000538834 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
CD9-208ENST00000538834 RTL5Q5HYW3 569 aaPredicted RBP17.48■□□□□ 0.39
CD9-208ENST00000538834 TMC4Q7Z404 712 aa17.48■□□□□ 0.39
CD9-208ENST00000538834 TTLL11Q8NHH1 800 aa17.48■□□□□ 0.39
CD9-208ENST00000538834 UTYO14607 1347 aa17.47■□□□□ 0.39
CD9-208ENST00000538834 SCN4AP35499 1836 aa17.47■□□□□ 0.39
CD9-208ENST00000538834 PSME4Q14997 1843 aa17.47■□□□□ 0.39
CD9-208ENST00000538834 ALDH1L1O75891 902 aa17.47■□□□□ 0.39
CD9-208ENST00000538834 CSF1RP07333 972 aa17.47■□□□□ 0.39
CD9-208ENST00000538834 HNRNPUQ00839 825 aaKnown RBP eCLIP17.47■□□□□ 0.39
CD9-208ENST00000538834 DDX46Q7L014 1031 aaKnown RBP17.47■□□□□ 0.39
CD9-208ENST00000538834 JARID2Q92833 1246 aaPredicted RBP17.47■□□□□ 0.39
CD9-208ENST00000538834 CELF1Q92879 486 aaKnown RBP17.47■□□□□ 0.39
CD9-208ENST00000538834 RARSP54136 660 aaKnown RBP17.46■□□□□ 0.39
CD9-208ENST00000538834 VPS33BQ9H267 617 aa17.45■□□□□ 0.38
CD9-208ENST00000538834 KIF3CO14782 793 aa17.44■□□□□ 0.38
CD9-208ENST00000538834 CTSWP56202 376 aa17.44■□□□□ 0.38
CD9-208ENST00000538834 RPS8P62241 208 aaKnown RBP17.44■□□□□ 0.38
CD9-208ENST00000538834 FOXO4P98177 505 aa17.44■□□□□ 0.38
CD9-208ENST00000538834 UBE3BQ7Z3V4 1068 aa17.44■□□□□ 0.38
CD9-208ENST00000538834 SEC31BQ9NQW1 1179 aa17.44■□□□□ 0.38
CD9-208ENST00000538834 ZNF646O15015 1829 aaPredicted RBP17.44■□□□□ 0.38
CD9-208ENST00000538834 SCN9AQ15858 1988 aa17.43■□□□□ 0.38
CD9-208ENST00000538834 GLTPD2A6NH11 291 aa17.43■□□□□ 0.38
CD9-208ENST00000538834 FZD9O00144 591 aa17.43■□□□□ 0.38
CD9-208ENST00000538834 IARSP41252 1262 aaKnown RBP17.43■□□□□ 0.38
CD9-208ENST00000538834 CCDC152Q4G0S7 254 aa17.43■□□□□ 0.38
CD9-208ENST00000538834 KAZALD1Q96I82 304 aa17.43■□□□□ 0.38
CD9-208ENST00000538834 POTECB2RU33 542 aa17.42■□□□□ 0.38
CD9-208ENST00000538834 GRM8O00222 908 aa17.42■□□□□ 0.38
CD9-208ENST00000538834 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
CD9-208ENST00000538834 BCL2L13Q9BXK5 485 aa17.42■□□□□ 0.38
CD9-208ENST00000538834 SRCIN1Q9C0H9 1055 aa17.42■□□□□ 0.38
CD9-208ENST00000538834 ZNF277Q9NRM2 450 aaPredicted RBP17.42■□□□□ 0.38
CD9-208ENST00000538834 PODXL2Q9NZ53 605 aa17.42■□□□□ 0.38
CD9-208ENST00000538834 GREM2Q9H772 168 aa17.41■□□□□ 0.38
CD9-208ENST00000538834 GPBP1L1Q9HC44 474 aaPredicted RBP17.41■□□□□ 0.38
CD9-208ENST00000538834 SMC4Q9NTJ3 1288 aa17.41■□□□□ 0.38
CD9-208ENST00000538834 EPHA10Q5JZY3 1008 aa17.4■□□□□ 0.38
CD9-208ENST00000538834 MPNDQ8N594 471 aa17.39■□□□□ 0.37
CD9-208ENST00000538834 USP44Q9H0E7 712 aa17.39■□□□□ 0.37
CD9-208ENST00000538834 NMRK2Q9NPI5 230 aa17.39■□□□□ 0.37
CD9-208ENST00000538834 NOB1Q9ULX3 412 aaKnown RBP17.39■□□□□ 0.37
CD9-208ENST00000538834 ADAMTSL1Q8N6G6 1762 aa17.38■□□□□ 0.37
CD9-208ENST00000538834 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
CD9-208ENST00000538834 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
CD9-208ENST00000538834 L3MBTL3Q96JM7 780 aaPredicted RBP17.38■□□□□ 0.37
CD9-208ENST00000538834 BSDC1Q9NW68 430 aaPredicted RBP17.38■□□□□ 0.37
CD9-208ENST00000538834 KDM2BQ8NHM5 1336 aa17.38■□□□□ 0.37
CD9-208ENST00000538834 GPSM2P81274 684 aa17.37■□□□□ 0.37
CD9-208ENST00000538834 RABL6Q3YEC7 729 aaPredicted RBP17.37■□□□□ 0.37
CD9-208ENST00000538834 SLC4A10Q6U841 1118 aa17.37■□□□□ 0.37
CD9-208ENST00000538834 SUPT20HQ8NEM7 779 aa17.37■□□□□ 0.37
CD9-208ENST00000538834 POLLQ9UGP5 575 aa17.37■□□□□ 0.37
CD9-208ENST00000538834 DPP8Q6V1X1 898 aaPredicted RBP17.36■□□□□ 0.37
CD9-208ENST00000538834 CDC5LQ99459 802 aaKnown RBP17.36■□□□□ 0.37
CD9-208ENST00000538834 KIF16BQ96L93 1317 aa17.36■□□□□ 0.37
CD9-208ENST00000538834 ZNF541Q9H0D2 1346 aa17.36■□□□□ 0.37
CD9-208ENST00000538834 BCAR3O75815 825 aa17.35■□□□□ 0.37
CD9-208ENST00000538834 ITGA6P23229 1130 aa17.35■□□□□ 0.37
CD9-208ENST00000538834 FAM161AQ3B820 660 aa17.35■□□□□ 0.37
CD9-208ENST00000538834 INTS3Q68E01 1043 aaKnown RBP17.35■□□□□ 0.37
CD9-208ENST00000538834 ANKRD18AQ8IVF6 992 aa17.35■□□□□ 0.37
CD9-208ENST00000538834 TBC1D16Q8TBP0 767 aa17.35■□□□□ 0.37
CD9-208ENST00000538834 ZNF526Q8TF50 670 aaPredicted RBP17.35■□□□□ 0.37
CD9-208ENST00000538834 SUCLG2Q96I99 432 aa17.35■□□□□ 0.37
CD9-208ENST00000538834 CCDC85AQ96PX6 553 aaPredicted RBP17.35■□□□□ 0.37
CD9-208ENST00000538834 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
CD9-208ENST00000538834 MINPP1Q9UNW1 487 aa17.35■□□□□ 0.37
CD9-208ENST00000538834 DDNO94850 711 aaPredicted RBP17.34■□□□□ 0.37
CD9-208ENST00000538834 DPY19L2Q6NUT2 758 aa17.34■□□□□ 0.37
CD9-208ENST00000538834 RRAGCQ9HB90 399 aa17.34■□□□□ 0.37
CD9-208ENST00000538834 C9orf78Q9NZ63 289 aaPredicted RBP17.34■□□□□ 0.37
CD9-208ENST00000538834 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
CD9-208ENST00000538834 C1QTNF8P60827 252 aa17.33■□□□□ 0.36
CD9-208ENST00000538834 AOC3Q16853 763 aa17.33■□□□□ 0.36
CD9-208ENST00000538834 LMBR1LQ6UX01 489 aa17.33■□□□□ 0.36
CD9-208ENST00000538834 ANKRD44Q8N8A2 993 aa17.33■□□□□ 0.36
CD9-208ENST00000538834 TMX4Q9H1E5 349 aaPredicted RBP17.33■□□□□ 0.36
CD9-208ENST00000538834 NSFL1CQ9UNZ2 370 aaKnown RBP17.33■□□□□ 0.36
CD9-208ENST00000538834 POLR2AP24928 1970 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms