RNA–Protein interactions for RNA: ENST00000538753.5

COPS7A-209, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-209ENST00000538753 WWC1Q8IX03 1113 aa18.71■□□□□ 0.59
COPS7A-209ENST00000538753 JMYQ8N9B5 988 aa18.71■□□□□ 0.59
COPS7A-209ENST00000538753 SUPT20HQ8NEM7 779 aa18.71■□□□□ 0.59
COPS7A-209ENST00000538753 PPIP5K2O43314 1243 aa18.7■□□□□ 0.58
COPS7A-209ENST00000538753 SF3B3Q15393 1217 aaKnown RBP18.7■□□□□ 0.58
COPS7A-209ENST00000538753 AOC3Q16853 763 aa18.7■□□□□ 0.58
COPS7A-209ENST00000538753 DPP8Q6V1X1 898 aaPredicted RBP18.7■□□□□ 0.58
COPS7A-209ENST00000538753 TMC4Q7Z404 712 aa18.7■□□□□ 0.58
COPS7A-209ENST00000538753 PNMA8AQ86V59 439 aaPredicted RBP18.7■□□□□ 0.58
COPS7A-209ENST00000538753 NIM1KQ8IY84 436 aa18.7■□□□□ 0.58
COPS7A-209ENST00000538753 MPNDQ8N594 471 aa18.7■□□□□ 0.58
COPS7A-209ENST00000538753 TSPYL6Q8N831 410 aa18.7■□□□□ 0.58
COPS7A-209ENST00000538753 TSR2Q969E8 191 aaKnown RBP18.7■□□□□ 0.58
COPS7A-209ENST00000538753 GJA3Q9Y6H8 435 aa18.7■□□□□ 0.58
COPS7A-209ENST00000538753 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
COPS7A-209ENST00000538753 EAPPQ56P03 285 aaPredicted RBP18.69■□□□□ 0.58
COPS7A-209ENST00000538753 RTL5Q5HYW3 569 aaPredicted RBP18.69■□□□□ 0.58
COPS7A-209ENST00000538753 SPEF2Q9C093 1822 aa18.69■□□□□ 0.58
COPS7A-209ENST00000538753 COL4A1P02462 1669 aa18.69■□□□□ 0.58
COPS7A-209ENST00000538753 DUOX1Q9NRD9 1551 aa18.68■□□□□ 0.58
COPS7A-209ENST00000538753 IRS4O14654 1257 aaPredicted RBP18.68■□□□□ 0.58
COPS7A-209ENST00000538753 ZBTB38Q8NAP3 1195 aaPredicted RBP18.68■□□□□ 0.58
COPS7A-209ENST00000538753 MYD88Q99836 296 aa18.68■□□□□ 0.58
COPS7A-209ENST00000538753 IL16Q14005 1332 aa18.68■□□□□ 0.58
COPS7A-209ENST00000538753 DDX58O95786 925 aaKnown RBP18.67■□□□□ 0.58
COPS7A-209ENST00000538753 CCDC191Q8NCU4 936 aa18.67■□□□□ 0.58
COPS7A-209ENST00000538753 CREBZFQ9NS37 354 aa18.67■□□□□ 0.58
COPS7A-209ENST00000538753 CLEC11AQ9Y240 323 aa18.67■□□□□ 0.58
COPS7A-209ENST00000538753 POLR2AP24928 1970 aaKnown RBP18.67■□□□□ 0.58
COPS7A-209ENST00000538753 PASKQ96RG2 1323 aa18.67■□□□□ 0.58
COPS7A-209ENST00000538753 ITGBL1O95965 494 aaPredicted RBP18.66■□□□□ 0.58
COPS7A-209ENST00000538753 LMOD1P29536 600 aaPredicted RBP18.66■□□□□ 0.58
COPS7A-209ENST00000538753 CELF1Q92879 486 aaKnown RBP18.66■□□□□ 0.58
COPS7A-209ENST00000538753 METTL22Q9BUU2 404 aaPredicted RBP18.66■□□□□ 0.58
COPS7A-209ENST00000538753 ZNRF3Q9ULT6 936 aa18.66■□□□□ 0.58
COPS7A-209ENST00000538753 HSP90B1P14625 803 aaKnown RBP18.65■□□□□ 0.58
COPS7A-209ENST00000538753 SCNN1DP51172 638 aa18.65■□□□□ 0.58
COPS7A-209ENST00000538753 KIAA2012Q0VF49 1180 aa18.65■□□□□ 0.58
COPS7A-209ENST00000538753 STK31Q9BXU1 1019 aa18.65■□□□□ 0.58
COPS7A-209ENST00000538753 CWC25Q9NXE8 425 aaPredicted RBP18.65■□□□□ 0.58
COPS7A-209ENST00000538753 PCCAP05165 728 aaPredicted RBP18.64■□□□□ 0.57
COPS7A-209ENST00000538753 CXCL9Q07325 125 aa18.64■□□□□ 0.57
COPS7A-209ENST00000538753 TWISTNBQ3B726 338 aaPredicted RBP18.64■□□□□ 0.57
COPS7A-209ENST00000538753 MAP3K2Q9Y2U5 619 aa18.64■□□□□ 0.57
COPS7A-209ENST00000538753 PSME4Q14997 1843 aa18.63■□□□□ 0.57
COPS7A-209ENST00000538753 SCN9AQ15858 1988 aa18.63■□□□□ 0.57
COPS7A-209ENST00000538753 EPS15P42566 896 aa18.63■□□□□ 0.57
COPS7A-209ENST00000538753 KSR2Q6VAB6 950 aa18.63■□□□□ 0.57
COPS7A-209ENST00000538753 PI4KAP2A4QPH2 592 aa18.62■□□□□ 0.57
COPS7A-209ENST00000538753 RPS8P62241 208 aaKnown RBP18.62■□□□□ 0.57
COPS7A-209ENST00000538753 MAP1SQ66K74 1059 aaPredicted RBP18.62■□□□□ 0.57
COPS7A-209ENST00000538753 WDR63Q8IWG1 891 aa18.62■□□□□ 0.57
COPS7A-209ENST00000538753 CNTROBQ8N137 903 aa18.62■□□□□ 0.57
COPS7A-209ENST00000538753 PI4KAP1Q8N8J0 262 aa18.62■□□□□ 0.57
COPS7A-209ENST00000538753 NSFL1CQ9UNZ2 370 aaKnown RBP18.62■□□□□ 0.57
COPS7A-209ENST00000538753 PDE8AO60658 829 aa18.61■□□□□ 0.57
COPS7A-209ENST00000538753 USP50Q70EL3 339 aaPredicted RBP18.61■□□□□ 0.57
COPS7A-209ENST00000538753 GPRC5DQ9NZD1 345 aa18.61■□□□□ 0.57
COPS7A-209ENST00000538753 FANCIQ9NVI1 1328 aa18.6■□□□□ 0.57
COPS7A-209ENST00000538753 TMEM88BA6NKF7 163 aa18.6■□□□□ 0.57
COPS7A-209ENST00000538753 SLC4A2P04920 1241 aa18.6■□□□□ 0.57
COPS7A-209ENST00000538753 WASHC4Q2M389 1173 aa18.6■□□□□ 0.57
COPS7A-209ENST00000538753 CCDC152Q4G0S7 254 aa18.6■□□□□ 0.57
COPS7A-209ENST00000538753 IFFO2Q5TF58 517 aa18.6■□□□□ 0.57
COPS7A-209ENST00000538753 CIAPIN1Q6FI81 312 aa18.6■□□□□ 0.57
COPS7A-209ENST00000538753 JARID2Q92833 1246 aaPredicted RBP18.6■□□□□ 0.57
COPS7A-209ENST00000538753 SEC31BQ9NQW1 1179 aa18.6■□□□□ 0.57
COPS7A-209ENST00000538753 SALL2Q9Y467 1007 aaPredicted RBP18.6■□□□□ 0.57
COPS7A-209ENST00000538753 CDHR2Q9BYE9 1310 aa18.59■□□□□ 0.57
COPS7A-209ENST00000538753 RAD17O75943 681 aa18.59■□□□□ 0.57
COPS7A-209ENST00000538753 IGKV5-2P06315 115 aa18.59■□□□□ 0.57
COPS7A-209ENST00000538753 GMPSP49915 693 aaPredicted RBP18.59■□□□□ 0.57
COPS7A-209ENST00000538753 GPSM2P81274 684 aa18.59■□□□□ 0.57
COPS7A-209ENST00000538753 NEXNQ0ZGT2 675 aa18.59■□□□□ 0.57
COPS7A-209ENST00000538753 TNIP1Q15025 636 aa18.59■□□□□ 0.57
COPS7A-209ENST00000538753 G2E3Q7L622 706 aa18.59■□□□□ 0.57
COPS7A-209ENST00000538753 ADARB2Q9NS39 739 aaKnown RBP18.59■□□□□ 0.57
COPS7A-209ENST00000538753 POLLQ9UGP5 575 aa18.59■□□□□ 0.57
COPS7A-209ENST00000538753 MKRN1Q9UHC7 482 aaKnown RBP18.59■□□□□ 0.57
COPS7A-209ENST00000538753 YDJCA8MPS7 323 aa18.58■□□□□ 0.56
COPS7A-209ENST00000538753 C6orf229H3BNL8 230 aa18.58■□□□□ 0.56
COPS7A-209ENST00000538753 CNTNAP1P78357 1384 aa18.57■□□□□ 0.56
COPS7A-209ENST00000538753 PODXL2Q9NZ53 605 aa18.57■□□□□ 0.56
COPS7A-209ENST00000538753 NEURL1BA8MQ27 555 aa18.56■□□□□ 0.56
COPS7A-209ENST00000538753 RIMBP2O15034 1052 aa18.56■□□□□ 0.56
COPS7A-209ENST00000538753 CWF19L2Q2TBE0 894 aaKnown RBP18.56■□□□□ 0.56
COPS7A-209ENST00000538753 FAM9BQ8IZU0 186 aa18.56■□□□□ 0.56
COPS7A-209ENST00000538753 TBC1D16Q8TBP0 767 aa18.56■□□□□ 0.56
COPS7A-209ENST00000538753 EYA3Q99504 573 aa18.56■□□□□ 0.56
COPS7A-209ENST00000538753 BCL2L13Q9BXK5 485 aa18.56■□□□□ 0.56
COPS7A-209ENST00000538753 DBNDD1Q9H9R9 158 aa18.56■□□□□ 0.56
COPS7A-209ENST00000538753 VAMP4O75379 141 aa18.55■□□□□ 0.56
COPS7A-209ENST00000538753 CTSWP56202 376 aa18.55■□□□□ 0.56
COPS7A-209ENST00000538753 EXOSC9Q06265 439 aaKnown RBP18.55■□□□□ 0.56
COPS7A-209ENST00000538753 FLIIQ13045 1269 aa18.55■□□□□ 0.56
COPS7A-209ENST00000538753 CCDC85AQ96PX6 553 aaPredicted RBP18.55■□□□□ 0.56
COPS7A-209ENST00000538753 ANKIB1Q9P2G1 1089 aa18.55■□□□□ 0.56
COPS7A-209ENST00000538753 H7C1W4 665 aa18.53■□□□□ 0.56
COPS7A-209ENST00000538753 ECE2O60344 883 aa18.53■□□□□ 0.56
COPS7A-209ENST00000538753 HSPA1AP0DMV8 641 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms