RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ATP6V0A2Q9Y487 856 aa10.77□□□□□ -0.69
SPARC-208ENST00000538026 MYH3P11055 1940 aa10.77□□□□□ -0.69
SPARC-208ENST00000538026 LRRC37AA6NMS7 1700 aa10.76□□□□□ -0.69
SPARC-208ENST00000538026 LTBP1Q14766 1721 aa10.76□□□□□ -0.69
SPARC-208ENST00000538026 BBOX1O75936 387 aa10.76□□□□□ -0.69
SPARC-208ENST00000538026 C1QTNF8P60827 252 aa10.76□□□□□ -0.69
SPARC-208ENST00000538026 FKBP5Q13451 457 aaPredicted RBP10.76□□□□□ -0.69
SPARC-208ENST00000538026 GRAPQ13588 217 aa10.76□□□□□ -0.69
SPARC-208ENST00000538026 SOGA3Q5TF21 947 aa10.76□□□□□ -0.69
SPARC-208ENST00000538026 RTKN2Q8IZC4 609 aa10.76□□□□□ -0.69
SPARC-208ENST00000538026 GRAPLQ8TC17 118 aaPredicted RBP10.76□□□□□ -0.69
SPARC-208ENST00000538026 PSMD1Q99460 953 aa10.76□□□□□ -0.69
SPARC-208ENST00000538026 DUOX1Q9NRD9 1551 aa10.76□□□□□ -0.69
SPARC-208ENST00000538026 GLTPD2A6NH11 291 aa10.75□□□□□ -0.69
SPARC-208ENST00000538026 WTIPA6NIX2 430 aaPredicted RBP10.75□□□□□ -0.69
SPARC-208ENST00000538026 SP8Q8IXZ3 490 aa10.75□□□□□ -0.69
SPARC-208ENST00000538026 LINS1Q8NG48 757 aa10.75□□□□□ -0.69
SPARC-208ENST00000538026 TTLL11Q8NHH1 800 aa10.75□□□□□ -0.69
SPARC-208ENST00000538026 CCDC85AQ96PX6 553 aaPredicted RBP10.75□□□□□ -0.69
SPARC-208ENST00000538026 RRAGCQ9HB90 399 aa10.75□□□□□ -0.69
SPARC-208ENST00000538026 CDHR2Q9BYE9 1310 aa10.75□□□□□ -0.69
SPARC-208ENST00000538026 ZC3H4Q9UPT8 1303 aaKnown RBP10.75□□□□□ -0.69
SPARC-208ENST00000538026 FZD9O00144 591 aa10.74□□□□□ -0.69
SPARC-208ENST00000538026 PDE8AO60658 829 aa10.74□□□□□ -0.69
SPARC-208ENST00000538026 IARSP41252 1262 aaKnown RBP10.74□□□□□ -0.69
SPARC-208ENST00000538026 EPHA10Q5JZY3 1008 aa10.74□□□□□ -0.69
SPARC-208ENST00000538026 CC2D2BQ6DHV5 1058 aa10.74□□□□□ -0.69
SPARC-208ENST00000538026 DDX46Q7L014 1031 aaKnown RBP10.74□□□□□ -0.69
SPARC-208ENST00000538026 UBE3BQ7Z3V4 1068 aa10.74□□□□□ -0.69
SPARC-208ENST00000538026 KAZALD1Q96I82 304 aa10.74□□□□□ -0.69
SPARC-208ENST00000538026 BCL2L13Q9BXK5 485 aa10.74□□□□□ -0.69
SPARC-208ENST00000538026 RTFDC1Q9BY42 306 aaPredicted RBP10.74□□□□□ -0.69
SPARC-208ENST00000538026 ZNF541Q9H0D2 1346 aa10.74□□□□□ -0.69
SPARC-208ENST00000538026 WDR90Q96KV7 1748 aa10.73□□□□□ -0.69
SPARC-208ENST00000538026 DDNO94850 711 aaPredicted RBP10.73□□□□□ -0.69
SPARC-208ENST00000538026 CSF1RP07333 972 aa10.73□□□□□ -0.69
SPARC-208ENST00000538026 CTSWP56202 376 aa10.73□□□□□ -0.69
SPARC-208ENST00000538026 RPS8P62241 208 aaKnown RBP10.73□□□□□ -0.69
SPARC-208ENST00000538026 FOXO4P98177 505 aa10.73□□□□□ -0.69
SPARC-208ENST00000538026 PLA2G12BQ9BX93 195 aa10.73□□□□□ -0.69
SPARC-208ENST00000538026 GREM2Q9H772 168 aa10.73□□□□□ -0.69
SPARC-208ENST00000538026 POLLQ9UGP5 575 aa10.73□□□□□ -0.69
SPARC-208ENST00000538026 SPEF2Q9C093 1822 aa10.72□□□□□ -0.69
SPARC-208ENST00000538026 GPSM2P81274 684 aa10.72□□□□□ -0.69
SPARC-208ENST00000538026 NEXNQ0ZGT2 675 aa10.72□□□□□ -0.69
SPARC-208ENST00000538026 GPR101Q96P66 508 aaPredicted RBP10.72□□□□□ -0.69
SPARC-208ENST00000538026 SCN9AQ15858 1988 aa10.72□□□□□ -0.69
SPARC-208ENST00000538026 RARSP54136 660 aaKnown RBP10.71□□□□□ -0.69
SPARC-208ENST00000538026 AOC3Q16853 763 aa10.71□□□□□ -0.69
SPARC-208ENST00000538026 ALDH1L2Q3SY69 923 aa10.71□□□□□ -0.69
SPARC-208ENST00000538026 MPNDQ8N594 471 aa10.71□□□□□ -0.69
SPARC-208ENST00000538026 RTL9Q8NET4 1388 aa10.71□□□□□ -0.69
SPARC-208ENST00000538026 KDM2BQ8NHM5 1336 aa10.7□□□□□ -0.7
SPARC-208ENST00000538026 YDJCA8MPS7 323 aa10.7□□□□□ -0.7
SPARC-208ENST00000538026 GRM8O00222 908 aa10.7□□□□□ -0.7
SPARC-208ENST00000538026 NBPF7P0C2Y1 421 aaPredicted RBP10.7□□□□□ -0.7
SPARC-208ENST00000538026 POTEIP0CG38 1075 aa10.7□□□□□ -0.7
SPARC-208ENST00000538026 POTEJP0CG39 1038 aa10.7□□□□□ -0.7
SPARC-208ENST00000538026 BRPF1P55201 1214 aaPredicted RBP10.7□□□□□ -0.7
SPARC-208ENST00000538026 HNRNPUQ00839 825 aaKnown RBP eCLIP10.7□□□□□ -0.7
SPARC-208ENST00000538026 FAM161AQ3B820 660 aa10.7□□□□□ -0.7
SPARC-208ENST00000538026 CCDC152Q4G0S7 254 aa10.7□□□□□ -0.7
SPARC-208ENST00000538026 GRIPAP1Q4V328 841 aa10.7□□□□□ -0.7
SPARC-208ENST00000538026 SLC4A10Q6U841 1118 aa10.7□□□□□ -0.7
SPARC-208ENST00000538026 DPP8Q6V1X1 898 aaPredicted RBP10.7□□□□□ -0.7
SPARC-208ENST00000538026 KCNQ5Q9NR82 932 aa10.7□□□□□ -0.7
SPARC-208ENST00000538026 UTYO14607 1347 aa10.69□□□□□ -0.7
SPARC-208ENST00000538026 ALDH1L1O75891 902 aa10.69□□□□□ -0.7
SPARC-208ENST00000538026 TOMM70O94826 608 aa10.69□□□□□ -0.7
SPARC-208ENST00000538026 VEGFAP15692 232 aaPredicted RBP10.69□□□□□ -0.7
SPARC-208ENST00000538026 KIAA2012Q0VF49 1180 aa10.69□□□□□ -0.7
SPARC-208ENST00000538026 TMC4Q7Z404 712 aa10.69□□□□□ -0.7
SPARC-208ENST00000538026 LARGE2Q8N3Y3 721 aa10.69□□□□□ -0.7
SPARC-208ENST00000538026 TBC1D16Q8TBP0 767 aa10.69□□□□□ -0.7
SPARC-208ENST00000538026 SUCLG2Q96I99 432 aa10.69□□□□□ -0.7
SPARC-208ENST00000538026 L3MBTL3Q96JM7 780 aaPredicted RBP10.69□□□□□ -0.7
SPARC-208ENST00000538026 PODXL2Q9NZ53 605 aa10.69□□□□□ -0.7
SPARC-208ENST00000538026 NOB1Q9ULX3 412 aaKnown RBP10.69□□□□□ -0.7
SPARC-208ENST00000538026 NSFL1CQ9UNZ2 370 aaKnown RBP10.69□□□□□ -0.7
SPARC-208ENST00000538026 TNNQ9UQP3 1299 aa10.69□□□□□ -0.7
SPARC-208ENST00000538026 SCN4AP35499 1836 aa10.68□□□□□ -0.7
SPARC-208ENST00000538026 PTPRCP08575 1304 aa10.68□□□□□ -0.7
SPARC-208ENST00000538026 PPIP5K2O43314 1243 aa10.68□□□□□ -0.7
SPARC-208ENST00000538026 CT47B1P0C2W7 299 aaPredicted RBP10.68□□□□□ -0.7
SPARC-208ENST00000538026 CXCL9Q07325 125 aa10.68□□□□□ -0.7
SPARC-208ENST00000538026 SRCIN1Q9C0H9 1055 aa10.68□□□□□ -0.7
SPARC-208ENST00000538026 USP44Q9H0E7 712 aa10.68□□□□□ -0.7
SPARC-208ENST00000538026 SMC4Q9NTJ3 1288 aa10.68□□□□□ -0.7
SPARC-208ENST00000538026 MINPP1Q9UNW1 487 aa10.68□□□□□ -0.7
SPARC-208ENST00000538026 A0A1B0GUL6 1792 aa10.67□□□□□ -0.7
SPARC-208ENST00000538026 SNAP23O00161 211 aa10.67□□□□□ -0.7
SPARC-208ENST00000538026 BCAR3O75815 825 aa10.67□□□□□ -0.7
SPARC-208ENST00000538026 ITGA6P23229 1130 aa10.67□□□□□ -0.7
SPARC-208ENST00000538026 SCNN1DP51172 638 aa10.67□□□□□ -0.7
SPARC-208ENST00000538026 DPY19L2Q6NUT2 758 aa10.67□□□□□ -0.7
SPARC-208ENST00000538026 LMBR1LQ6UX01 489 aa10.67□□□□□ -0.7
SPARC-208ENST00000538026 ANKRD44Q8N8A2 993 aa10.67□□□□□ -0.7
SPARC-208ENST00000538026 RBM46Q8TBY0 533 aaKnown RBP10.67□□□□□ -0.7
SPARC-208ENST00000538026 VPS33BQ9H267 617 aa10.67□□□□□ -0.7
SPARC-208ENST00000538026 BSDC1Q9NW68 430 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms