RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-209ENST00000537533 NEURL1BA8MQ27 555 aa15.96■□□□□ 0.15
PTPN6-209ENST00000537533 IARSP41252 1262 aaKnown RBP15.96■□□□□ 0.15
PTPN6-209ENST00000537533 RTL5Q5HYW3 569 aaPredicted RBP15.96■□□□□ 0.15
PTPN6-209ENST00000537533 TRMT2AQ8IZ69 625 aaKnown RBP15.96■□□□□ 0.15
PTPN6-209ENST00000537533 MIER1Q8N108 512 aa15.96■□□□□ 0.15
PTPN6-209ENST00000537533 DNAAF4Q8WXU2 420 aa15.96■□□□□ 0.15
PTPN6-209ENST00000537533 PDE8AO60658 829 aa15.95■□□□□ 0.14
PTPN6-209ENST00000537533 DPY19L2Q6NUT2 758 aa15.95■□□□□ 0.14
PTPN6-209ENST00000537533 SLC51AQ86UW1 340 aa15.95■□□□□ 0.14
PTPN6-209ENST00000537533 H7C1W4 665 aa15.94■□□□□ 0.14
PTPN6-209ENST00000537533 CWF19L2Q2TBE0 894 aaKnown RBP15.94■□□□□ 0.14
PTPN6-209ENST00000537533 LINS1Q8NG48 757 aa15.94■□□□□ 0.14
PTPN6-209ENST00000537533 RTFDC1Q9BY42 306 aaPredicted RBP15.94■□□□□ 0.14
PTPN6-209ENST00000537533 TMX4Q9H1E5 349 aaPredicted RBP15.94■□□□□ 0.14
PTPN6-209ENST00000537533 VPS33BQ9H267 617 aa15.94■□□□□ 0.14
PTPN6-209ENST00000537533 RRAGCQ9HB90 399 aa15.94■□□□□ 0.14
PTPN6-209ENST00000537533 COL4A1P02462 1669 aa15.94■□□□□ 0.14
PTPN6-209ENST00000537533 TOMM70O94826 608 aa15.93■□□□□ 0.14
PTPN6-209ENST00000537533 GCKRQ14397 625 aa15.93■□□□□ 0.14
PTPN6-209ENST00000537533 CELF1Q92879 486 aaKnown RBP15.93■□□□□ 0.14
PTPN6-209ENST00000537533 CDCA7LQ96GN5 454 aa15.93■□□□□ 0.14
PTPN6-209ENST00000537533 SCN4AP35499 1836 aa15.93■□□□□ 0.14
PTPN6-209ENST00000537533 COL4A5P29400 1685 aa15.92■□□□□ 0.14
PTPN6-209ENST00000537533 FZD9O00144 591 aa15.92■□□□□ 0.14
PTPN6-209ENST00000537533 CCDC152Q4G0S7 254 aa15.92■□□□□ 0.14
PTPN6-209ENST00000537533 JARID2Q92833 1246 aaPredicted RBP15.92■□□□□ 0.14
PTPN6-209ENST00000537533 LTBP1Q14766 1721 aa15.91■□□□□ 0.14
PTPN6-209ENST00000537533 POTECB2RU33 542 aa15.91■□□□□ 0.14
PTPN6-209ENST00000537533 VEGFAP15692 232 aaPredicted RBP15.91■□□□□ 0.14
PTPN6-209ENST00000537533 CASP7P55210 303 aa15.91■□□□□ 0.14
PTPN6-209ENST00000537533 RPS8P62241 208 aaKnown RBP15.91■□□□□ 0.14
PTPN6-209ENST00000537533 BEND3Q5T5X7 828 aa15.91■□□□□ 0.14
PTPN6-209ENST00000537533 MPNDQ8N594 471 aa15.91■□□□□ 0.14
PTPN6-209ENST00000537533 SUPT20HQ8NEM7 779 aa15.91■□□□□ 0.14
PTPN6-209ENST00000537533 RBM46Q8TBY0 533 aaKnown RBP15.91■□□□□ 0.14
PTPN6-209ENST00000537533 PLA2G12BQ9BX93 195 aa15.91■□□□□ 0.14
PTPN6-209ENST00000537533 DUOX1Q9NRD9 1551 aa15.91■□□□□ 0.14
PTPN6-209ENST00000537533 F6X3S4 739 aa15.9■□□□□ 0.14
PTPN6-209ENST00000537533 DDNO94850 711 aaPredicted RBP15.9■□□□□ 0.14
PTPN6-209ENST00000537533 DPP8Q6V1X1 898 aaPredicted RBP15.9■□□□□ 0.14
PTPN6-209ENST00000537533 MRPL50Q8N5N7 158 aaKnown RBP15.9■□□□□ 0.14
PTPN6-209ENST00000537533 JDP2Q8WYK2 163 aa15.9■□□□□ 0.14
PTPN6-209ENST00000537533 RTL9Q8NET4 1388 aa15.89■□□□□ 0.13
PTPN6-209ENST00000537533 CT47B1P0C2W7 299 aaPredicted RBP15.89■□□□□ 0.13
PTPN6-209ENST00000537533 CTSWP56202 376 aa15.89■□□□□ 0.13
PTPN6-209ENST00000537533 ALDH1L2Q3SY69 923 aa15.89■□□□□ 0.13
PTPN6-209ENST00000537533 UBE3BQ7Z3V4 1068 aa15.89■□□□□ 0.13
PTPN6-209ENST00000537533 TTLL11Q8NHH1 800 aa15.89■□□□□ 0.13
PTPN6-209ENST00000537533 L3MBTL3Q96JM7 780 aaPredicted RBP15.89■□□□□ 0.13
PTPN6-209ENST00000537533 SEC31BQ9NQW1 1179 aa15.89■□□□□ 0.13
PTPN6-209ENST00000537533 ZNF541Q9H0D2 1346 aa15.89■□□□□ 0.13
PTPN6-209ENST00000537533 C16orf71Q8IYS4 520 aaPredicted RBP15.88■□□□□ 0.13
PTPN6-209ENST00000537533 LARGE2Q8N3Y3 721 aa15.88■□□□□ 0.13
PTPN6-209ENST00000537533 SSH1Q8WYL5 1049 aa15.88■□□□□ 0.13
PTPN6-209ENST00000537533 PTPRCP08575 1304 aa15.88■□□□□ 0.13
PTPN6-209ENST00000537533 PPIP5K2O43314 1243 aa15.87■□□□□ 0.13
PTPN6-209ENST00000537533 KIAA2012Q0VF49 1180 aa15.87■□□□□ 0.13
PTPN6-209ENST00000537533 SPEF2Q9C093 1822 aa15.87■□□□□ 0.13
PTPN6-209ENST00000537533 ALDH1L1O75891 902 aa15.86■□□□□ 0.13
PTPN6-209ENST00000537533 CSF1RP07333 972 aa15.86■□□□□ 0.13
PTPN6-209ENST00000537533 EIF6P56537 245 aaKnown RBP15.86■□□□□ 0.13
PTPN6-209ENST00000537533 FSTL1Q12841 308 aa15.86■□□□□ 0.13
PTPN6-209ENST00000537533 AOC3Q16853 763 aa15.86■□□□□ 0.13
PTPN6-209ENST00000537533 ANKRD18AQ8IVF6 992 aa15.86■□□□□ 0.13
PTPN6-209ENST00000537533 NIM1KQ8IY84 436 aa15.86■□□□□ 0.13
PTPN6-209ENST00000537533 GPC2Q8N158 579 aa15.86■□□□□ 0.13
PTPN6-209ENST00000537533 CCDC85AQ96PX6 553 aaPredicted RBP15.86■□□□□ 0.13
PTPN6-209ENST00000537533 GREM2Q9H772 168 aa15.86■□□□□ 0.13
PTPN6-209ENST00000537533 PODXL2Q9NZ53 605 aa15.86■□□□□ 0.13
PTPN6-209ENST00000537533 NSFL1CQ9UNZ2 370 aaKnown RBP15.86■□□□□ 0.13
PTPN6-209ENST00000537533 IQCA1LA6NCM1 817 aa15.85■□□□□ 0.13
PTPN6-209ENST00000537533 HSPA6P17066 643 aa15.85■□□□□ 0.13
PTPN6-209ENST00000537533 GPSM2P81274 684 aa15.85■□□□□ 0.13
PTPN6-209ENST00000537533 CDC5LQ99459 802 aaKnown RBP15.85■□□□□ 0.13
PTPN6-209ENST00000537533 SRCIN1Q9C0H9 1055 aa15.85■□□□□ 0.13
PTPN6-209ENST00000537533 BRPF1P55201 1214 aaPredicted RBP15.84■□□□□ 0.13
PTPN6-209ENST00000537533 SMC1BQ8NDV3 1235 aa15.84■□□□□ 0.13
PTPN6-209ENST00000537533 POLLQ9UGP5 575 aa15.84■□□□□ 0.13
PTPN6-209ENST00000537533 ZNRF3Q9ULT6 936 aa15.84■□□□□ 0.13
PTPN6-209ENST00000537533 GRM8O00222 908 aa15.83■□□□□ 0.12
PTPN6-209ENST00000537533 SLC4A10Q6U841 1118 aa15.83■□□□□ 0.12
PTPN6-209ENST00000537533 TBC1D16Q8TBP0 767 aa15.83■□□□□ 0.12
PTPN6-209ENST00000537533 BSDC1Q9NW68 430 aaPredicted RBP15.83■□□□□ 0.12
PTPN6-209ENST00000537533 FOXO4P98177 505 aa15.82■□□□□ 0.12
PTPN6-209ENST00000537533 WASHC4Q2M389 1173 aa15.82■□□□□ 0.12
PTPN6-209ENST00000537533 EYA3Q99504 573 aa15.82■□□□□ 0.12
PTPN6-209ENST00000537533 BCL2L13Q9BXK5 485 aa15.82■□□□□ 0.12
PTPN6-209ENST00000537533 TAF1DQ9H5J8 278 aaPredicted RBP15.82■□□□□ 0.12
PTPN6-209ENST00000537533 SMC4Q9NTJ3 1288 aa15.82■□□□□ 0.12
PTPN6-209ENST00000537533 UTYO14607 1347 aa15.82■□□□□ 0.12
PTPN6-209ENST00000537533 CEP350Q5VT06 3117 aa15.82■□□□□ 0.12
PTPN6-209ENST00000537533 ADAMTSL1Q8N6G6 1762 aa15.82■□□□□ 0.12
PTPN6-209ENST00000537533 C6orf229H3BNL8 230 aa15.81■□□□□ 0.12
PTPN6-209ENST00000537533 ITGA6P23229 1130 aa15.81■□□□□ 0.12
PTPN6-209ENST00000537533 XDHP47989 1333 aa15.81■□□□□ 0.12
PTPN6-209ENST00000537533 CXCL9Q07325 125 aa15.81■□□□□ 0.12
PTPN6-209ENST00000537533 FAM161AQ3B820 660 aa15.81■□□□□ 0.12
PTPN6-209ENST00000537533 C9orf78Q9NZ63 289 aaPredicted RBP15.81■□□□□ 0.12
PTPN6-209ENST00000537533 HACL1Q9UJ83 578 aa15.81■□□□□ 0.12
PTPN6-209ENST00000537533 MINPP1Q9UNW1 487 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms