RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 LINS1Q8NG48 757 aa22.06■■□□□ 1.12
GPN3-202ENST00000537466 ZNF277Q9NRM2 450 aaPredicted RBP22.06■■□□□ 1.12
GPN3-202ENST00000537466 PDE8AO60658 829 aa22.05■■□□□ 1.12
GPN3-202ENST00000537466 CC2D2BQ6DHV5 1058 aa22.05■■□□□ 1.12
GPN3-202ENST00000537466 BCL2L13Q9BXK5 485 aa22.05■■□□□ 1.12
GPN3-202ENST00000537466 ATP6V0A2Q9Y487 856 aa22.05■■□□□ 1.12
GPN3-202ENST00000537466 ZC3H4Q9UPT8 1303 aaKnown RBP22.05■■□□□ 1.12
GPN3-202ENST00000537466 H7C1W4 665 aa22.04■■□□□ 1.12
GPN3-202ENST00000537466 BBOX1O75936 387 aa22.04■■□□□ 1.12
GPN3-202ENST00000537466 BEND3Q5T5X7 828 aa22.04■■□□□ 1.12
GPN3-202ENST00000537466 CELF1Q92879 486 aaKnown RBP22.04■■□□□ 1.12
GPN3-202ENST00000537466 UBE3BQ7Z3V4 1068 aa22.03■■□□□ 1.12
GPN3-202ENST00000537466 PSMD1Q99460 953 aa22.03■■□□□ 1.12
GPN3-202ENST00000537466 HSP90B1P14625 803 aaKnown RBP22.03■■□□□ 1.12
GPN3-202ENST00000537466 CCDC85AQ96PX6 553 aaPredicted RBP22.03■■□□□ 1.12
GPN3-202ENST00000537466 SEC31BQ9NQW1 1179 aa22.03■■□□□ 1.12
GPN3-202ENST00000537466 COL4A5P29400 1685 aa22.02■■□□□ 1.12
GPN3-202ENST00000537466 CASP7P55210 303 aa22.02■■□□□ 1.12
GPN3-202ENST00000537466 SP8Q8IXZ3 490 aa22.02■■□□□ 1.12
GPN3-202ENST00000537466 NMRK2Q9NPI5 230 aa22.02■■□□□ 1.12
GPN3-202ENST00000537466 LTBP1Q14766 1721 aa22.01■■□□□ 1.11
GPN3-202ENST00000537466 IARSP41252 1262 aaKnown RBP22.01■■□□□ 1.11
GPN3-202ENST00000537466 ALDH1L2Q3SY69 923 aa22.01■■□□□ 1.11
GPN3-202ENST00000537466 GRIPAP1Q4V328 841 aa22.01■■□□□ 1.11
GPN3-202ENST00000537466 SLC4A10Q6U841 1118 aa22.01■■□□□ 1.11
GPN3-202ENST00000537466 DUOX1Q9NRD9 1551 aa22.01■■□□□ 1.11
GPN3-202ENST00000537466 KIF3CO14782 793 aa22■■□□□ 1.11
GPN3-202ENST00000537466 CTSWP56202 376 aa22■■□□□ 1.11
GPN3-202ENST00000537466 CCDC152Q4G0S7 254 aa22■■□□□ 1.11
GPN3-202ENST00000537466 KDM2BQ8NHM5 1336 aa21.99■■□□□ 1.11
GPN3-202ENST00000537466 GLTPD2A6NH11 291 aa21.99■■□□□ 1.11
GPN3-202ENST00000537466 CT47B1P0C2W7 299 aaPredicted RBP21.99■■□□□ 1.11
GPN3-202ENST00000537466 TTLL11Q8NHH1 800 aa21.99■■□□□ 1.11
GPN3-202ENST00000537466 TMX4Q9H1E5 349 aaPredicted RBP21.99■■□□□ 1.11
GPN3-202ENST00000537466 SMC4Q9NTJ3 1288 aa21.99■■□□□ 1.11
GPN3-202ENST00000537466 WDR90Q96KV7 1748 aa21.98■■□□□ 1.11
GPN3-202ENST00000537466 PTPRCP08575 1304 aa21.98■■□□□ 1.11
GPN3-202ENST00000537466 TMC4Q7Z404 712 aa21.98■■□□□ 1.11
GPN3-202ENST00000537466 RPS8P62241 208 aaKnown RBP21.97■■□□□ 1.11
GPN3-202ENST00000537466 DPP8Q6V1X1 898 aaPredicted RBP21.96■■□□□ 1.11
GPN3-202ENST00000537466 MPNDQ8N594 471 aa21.96■■□□□ 1.11
GPN3-202ENST00000537466 PLA2G12BQ9BX93 195 aa21.96■■□□□ 1.11
GPN3-202ENST00000537466 SRCIN1Q9C0H9 1055 aa21.96■■□□□ 1.11
GPN3-202ENST00000537466 GREM2Q9H772 168 aa21.96■■□□□ 1.11
GPN3-202ENST00000537466 RRAGCQ9HB90 399 aa21.96■■□□□ 1.11
GPN3-202ENST00000537466 RTFDC1Q9BY42 306 aaPredicted RBP21.96■■□□□ 1.11
GPN3-202ENST00000537466 ALDH1L1O75891 902 aa21.95■■□□□ 1.1
GPN3-202ENST00000537466 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
GPN3-202ENST00000537466 ZNF541Q9H0D2 1346 aa21.94■■□□□ 1.1
GPN3-202ENST00000537466 GRM8O00222 908 aa21.94■■□□□ 1.1
GPN3-202ENST00000537466 RARSP54136 660 aaKnown RBP21.94■■□□□ 1.1
GPN3-202ENST00000537466 C1QTNF8P60827 252 aa21.94■■□□□ 1.1
GPN3-202ENST00000537466 AOC3Q16853 763 aa21.94■■□□□ 1.1
GPN3-202ENST00000537466 DPY19L2Q6NUT2 758 aa21.94■■□□□ 1.1
GPN3-202ENST00000537466 RTL9Q8NET4 1388 aa21.94■■□□□ 1.1
GPN3-202ENST00000537466 FZD9O00144 591 aa21.93■■□□□ 1.1
GPN3-202ENST00000537466 PPIP5K2O43314 1243 aa21.93■■□□□ 1.1
GPN3-202ENST00000537466 DDNO94850 711 aaPredicted RBP21.93■■□□□ 1.1
GPN3-202ENST00000537466 GPSM2P81274 684 aa21.93■■□□□ 1.1
GPN3-202ENST00000537466 LARGE2Q8N3Y3 721 aa21.93■■□□□ 1.1
GPN3-202ENST00000537466 NSFL1CQ9UNZ2 370 aaKnown RBP21.93■■□□□ 1.1
GPN3-202ENST00000537466 CSF1RP07333 972 aa21.92■■□□□ 1.1
GPN3-202ENST00000537466 FOXO4P98177 505 aa21.92■■□□□ 1.1
GPN3-202ENST00000537466 ANKRD18AQ8IVF6 992 aa21.92■■□□□ 1.1
GPN3-202ENST00000537466 SUPT20HQ8NEM7 779 aa21.92■■□□□ 1.1
GPN3-202ENST00000537466 JDP2Q8WYK2 163 aa21.92■■□□□ 1.1
GPN3-202ENST00000537466 C9orf78Q9NZ63 289 aaPredicted RBP21.92■■□□□ 1.1
GPN3-202ENST00000537466 NOB1Q9ULX3 412 aaKnown RBP21.92■■□□□ 1.1
GPN3-202ENST00000537466 SCN4AP35499 1836 aa21.92■■□□□ 1.1
GPN3-202ENST00000537466 POTECB2RU33 542 aa21.91■■□□□ 1.1
GPN3-202ENST00000537466 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
GPN3-202ENST00000537466 FAM161AQ3B820 660 aa21.91■■□□□ 1.1
GPN3-202ENST00000537466 CDC5LQ99459 802 aaKnown RBP21.91■■□□□ 1.1
GPN3-202ENST00000537466 A0A1B0GUL6 1792 aa21.91■■□□□ 1.1
GPN3-202ENST00000537466 EPHA10Q5JZY3 1008 aa21.9■■□□□ 1.1
GPN3-202ENST00000537466 POLLQ9UGP5 575 aa21.9■■□□□ 1.1
GPN3-202ENST00000537466 NBPF7P0C2Y1 421 aaPredicted RBP21.9■■□□□ 1.1
GPN3-202ENST00000537466 ITGA6P23229 1130 aa21.9■■□□□ 1.1
GPN3-202ENST00000537466 VPS33BQ9H267 617 aa21.9■■□□□ 1.1
GPN3-202ENST00000537466 KIAA2012Q0VF49 1180 aa21.89■■□□□ 1.09
GPN3-202ENST00000537466 NIM1KQ8IY84 436 aa21.89■■□□□ 1.09
GPN3-202ENST00000537466 UTYO14607 1347 aa21.88■■□□□ 1.09
GPN3-202ENST00000537466 VEGFAP15692 232 aaPredicted RBP21.88■■□□□ 1.09
GPN3-202ENST00000537466 SUCLG2Q96I99 432 aa21.88■■□□□ 1.09
GPN3-202ENST00000537466 GPR101Q96P66 508 aaPredicted RBP21.88■■□□□ 1.09
GPN3-202ENST00000537466 C6orf229H3BNL8 230 aa21.87■■□□□ 1.09
GPN3-202ENST00000537466 BCAR3O75815 825 aa21.87■■□□□ 1.09
GPN3-202ENST00000537466 TOMM70O94826 608 aa21.87■■□□□ 1.09
GPN3-202ENST00000537466 LMBR1LQ6UX01 489 aa21.87■■□□□ 1.09
GPN3-202ENST00000537466 TBC1D16Q8TBP0 767 aa21.87■■□□□ 1.09
GPN3-202ENST00000537466 KAZALD1Q96I82 304 aa21.87■■□□□ 1.09
GPN3-202ENST00000537466 BSDC1Q9NW68 430 aaPredicted RBP21.87■■□□□ 1.09
GPN3-202ENST00000537466 PODXL2Q9NZ53 605 aa21.87■■□□□ 1.09
GPN3-202ENST00000537466 ANKIB1Q9P2G1 1089 aa21.86■■□□□ 1.09
GPN3-202ENST00000537466 CHMP3Q9Y3E7 222 aa21.86■■□□□ 1.09
GPN3-202ENST00000537466 RIMBP2O15034 1052 aa21.85■■□□□ 1.09
GPN3-202ENST00000537466 EIF6P56537 245 aaKnown RBP21.85■■□□□ 1.09
GPN3-202ENST00000537466 WASHC4Q2M389 1173 aa21.85■■□□□ 1.09
GPN3-202ENST00000537466 C16orf71Q8IYS4 520 aaPredicted RBP21.85■■□□□ 1.09
GPN3-202ENST00000537466 L3MBTL3Q96JM7 780 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms