RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 RRS1Q15050 365 aaKnown RBP12.22□□□□□ -0.45
CLIP1-209ENST00000537178 TMC6Q7Z403 805 aa12.22□□□□□ -0.45
CLIP1-209ENST00000537178 TET3O43151 1660 aa12.22□□□□□ -0.45
CLIP1-209ENST00000537178 GOLIM4O00461 696 aa12.22□□□□□ -0.45
CLIP1-209ENST00000537178 CCDC172P0C7W6 258 aa12.22□□□□□ -0.45
CLIP1-209ENST00000537178 KIF5BP33176 963 aa12.22□□□□□ -0.45
CLIP1-209ENST00000537178 SNW1Q13573 536 aaKnown RBP12.22□□□□□ -0.45
CLIP1-209ENST00000537178 ANTXR1Q9H6X2 564 aa12.22□□□□□ -0.45
CLIP1-209ENST00000537178 RPGRIP1LQ68CZ1 1315 aa12.22□□□□□ -0.45
CLIP1-209ENST00000537178 CHMP4BP1P59074 171 aa12.22□□□□□ -0.45
CLIP1-209ENST00000537178 PPP1R14CQ8TAE6 165 aa12.22□□□□□ -0.45
CLIP1-209ENST00000537178 ADGRB2O60241 1585 aa12.21□□□□□ -0.45
CLIP1-209ENST00000537178 ZNF165P49910 485 aa12.21□□□□□ -0.45
CLIP1-209ENST00000537178 KIAA0753Q2KHM9 967 aa12.21□□□□□ -0.45
CLIP1-209ENST00000537178 PRC1O43663 620 aa12.21□□□□□ -0.45
CLIP1-209ENST00000537178 IARSP41252 1262 aaKnown RBP12.21□□□□□ -0.45
CLIP1-209ENST00000537178 TMEM87AQ8NBN3 555 aa12.21□□□□□ -0.45
CLIP1-209ENST00000537178 ZPR1O75312 459 aa12.21□□□□□ -0.46
CLIP1-209ENST00000537178 CKAP4Q07065 602 aaKnown RBP12.21□□□□□ -0.46
CLIP1-209ENST00000537178 CCDC155Q8N6L0 562 aa12.21□□□□□ -0.46
CLIP1-209ENST00000537178 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.46
CLIP1-209ENST00000537178 MAP3K4Q9Y6R4 1608 aa12.21□□□□□ -0.46
CLIP1-209ENST00000537178 ABCC11Q96J66 1382 aa12.21□□□□□ -0.46
CLIP1-209ENST00000537178 SPTY2D1Q68D10 685 aaPredicted RBP12.21□□□□□ -0.46
CLIP1-209ENST00000537178 CCDC102BQ68D86 513 aa12.21□□□□□ -0.46
CLIP1-209ENST00000537178 ANKLE2Q86XL3 938 aa12.21□□□□□ -0.46
CLIP1-209ENST00000537178 SREK1Q8WXA9 508 aaKnown RBP12.21□□□□□ -0.46
CLIP1-209ENST00000537178 AKR1B10O60218 316 aa12.2□□□□□ -0.46
CLIP1-209ENST00000537178 LDHCP07864 332 aa12.2□□□□□ -0.46
CLIP1-209ENST00000537178 WDR78Q5VTH9 848 aa12.2□□□□□ -0.46
CLIP1-209ENST00000537178 UVSSAQ2YD98 709 aa12.2□□□□□ -0.46
CLIP1-209ENST00000537178 JADE2Q9NQC1 790 aa12.2□□□□□ -0.46
CLIP1-209ENST00000537178 ANKIB1Q9P2G1 1089 aa12.2□□□□□ -0.46
CLIP1-209ENST00000537178 PTCD1O75127 700 aaKnown RBP12.2□□□□□ -0.46
CLIP1-209ENST00000537178 IPO4Q8TEX9 1081 aaKnown RBP12.2□□□□□ -0.46
CLIP1-209ENST00000537178 ZHX1Q9UKY1 873 aaPredicted RBP12.2□□□□□ -0.46
CLIP1-209ENST00000537178 ERVK-7P63135 1459 aa12.2□□□□□ -0.46
CLIP1-209ENST00000537178 LMAN1P49257 510 aa12.2□□□□□ -0.46
CLIP1-209ENST00000537178 GNG11P61952 73 aa12.2□□□□□ -0.46
CLIP1-209ENST00000537178 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
CLIP1-209ENST00000537178 SSX2IPQ9Y2D8 614 aa12.2□□□□□ -0.46
CLIP1-209ENST00000537178 TAF7Q15545 349 aaPredicted RBP12.19□□□□□ -0.46
CLIP1-209ENST00000537178 MYD88Q99836 296 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 SSFA2P28290 1259 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 AMOTQ4VCS5 1084 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 CCDC174Q6PII3 467 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 PAXBP1Q9Y5B6 917 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 USP16Q9Y5T5 823 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 ARHGAP5Q13017 1502 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 BIN1O00499 593 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 SMARCA5O60264 1052 aaPredicted RBP12.19□□□□□ -0.46
CLIP1-209ENST00000537178 HSPA4P34932 840 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 SYCP3Q8IZU3 236 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 DDX23Q9BUQ8 820 aaKnown RBP12.19□□□□□ -0.46
CLIP1-209ENST00000537178 ZFYVE16Q7Z3T8 1539 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 ZMYM3Q14202 1370 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 STX6O43752 255 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 MYO1BO43795 1136 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 ZC3H6P61129 1189 aaKnown RBP12.19□□□□□ -0.46
CLIP1-209ENST00000537178 DRC1Q96MC2 740 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 DMRT2Q9Y5R5 561 aa12.19□□□□□ -0.46
CLIP1-209ENST00000537178 N4BP3O15049 544 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 HSF2BPO75031 334 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 NBPF7P0C2Y1 421 aaPredicted RBP12.18□□□□□ -0.46
CLIP1-209ENST00000537178 EVI5LQ96CN4 794 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 PRIMPOLQ96LW4 560 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 CCDC8Q9H0W5 538 aaPredicted RBP12.18□□□□□ -0.46
CLIP1-209ENST00000537178 ADCY5O95622 1261 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 DNAAF4Q8WXU2 420 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 ORC3Q9UBD5 711 aaPredicted RBP12.18□□□□□ -0.46
CLIP1-209ENST00000537178 TTF1Q15361 905 aaPredicted RBP12.18□□□□□ -0.46
CLIP1-209ENST00000537178 USP37Q86T82 979 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 SSH1Q8WYL5 1049 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 TNPO1Q92973 898 aaKnown RBP12.18□□□□□ -0.46
CLIP1-209ENST00000537178 LRRC45Q96CN5 670 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 TRERF1Q96PN7 1200 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 IQCGQ9H095 443 aaKnown RBP12.18□□□□□ -0.46
CLIP1-209ENST00000537178 NSRP1Q9H0G5 558 aaKnown RBP12.18□□□□□ -0.46
CLIP1-209ENST00000537178 ECHDC1Q9NTX5 307 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 TFIP11Q9UBB9 837 aaKnown RBP12.18□□□□□ -0.46
CLIP1-209ENST00000537178 LIG1P18858 919 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 CCT2P78371 535 aaKnown RBP12.18□□□□□ -0.46
CLIP1-209ENST00000537178 CFAP57Q96MR6 1250 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 SPAG5Q96R06 1193 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 CCDC77Q9BR77 488 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 TRMT112Q9UI30 125 aaKnown RBP12.18□□□□□ -0.46
CLIP1-209ENST00000537178 ERCC6L2Q5T890 1561 aa12.18□□□□□ -0.46
CLIP1-209ENST00000537178 CHD1O14646 1710 aa12.17□□□□□ -0.46
CLIP1-209ENST00000537178 SPAG1Q07617 926 aa12.17□□□□□ -0.46
CLIP1-209ENST00000537178 RMND1Q9NWS8 449 aa12.17□□□□□ -0.46
CLIP1-209ENST00000537178 A0A1W2PRG0 241 aa12.17□□□□□ -0.46
CLIP1-209ENST00000537178 KIF4AO95239 1232 aa12.17□□□□□ -0.46
CLIP1-209ENST00000537178 BMP15O95972 392 aa12.17□□□□□ -0.46
CLIP1-209ENST00000537178 MNAT1P51948 309 aa12.17□□□□□ -0.46
CLIP1-209ENST00000537178 CYLC1P35663 651 aaPredicted RBP12.17□□□□□ -0.46
CLIP1-209ENST00000537178 PDE4BQ07343 736 aa12.17□□□□□ -0.46
CLIP1-209ENST00000537178 TBCAO75347 108 aaKnown RBP12.17□□□□□ -0.46
CLIP1-209ENST00000537178 RARSP54136 660 aaKnown RBP12.17□□□□□ -0.46
CLIP1-209ENST00000537178 UBE2HP62256 183 aa12.17□□□□□ -0.46
CLIP1-209ENST00000537178 TMEM67Q5HYA8 995 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms