RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 GRAPQ13588 217 aa22.91■■□□□ 1.26
TNFRSF1A-209ENST00000536717 C16orf71Q8IYS4 520 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF1A-209ENST00000536717 GRAPLQ8TC17 118 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF1A-209ENST00000536717 MYH16Q9H6N6 1097 aa22.91■■□□□ 1.26
TNFRSF1A-209ENST00000536717 CWC25Q9NXE8 425 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF1A-209ENST00000536717 IGKV5-2P06315 115 aa22.9■■□□□ 1.26
TNFRSF1A-209ENST00000536717 HSPA6P17066 643 aa22.9■■□□□ 1.26
TNFRSF1A-209ENST00000536717 PCCAP05165 728 aaPredicted RBP22.89■■□□□ 1.26
TNFRSF1A-209ENST00000536717 FLIIQ13045 1269 aa22.89■■□□□ 1.26
TNFRSF1A-209ENST00000536717 SP8Q8IXZ3 490 aa22.89■■□□□ 1.26
TNFRSF1A-209ENST00000536717 FZD9O00144 591 aa22.88■■□□□ 1.25
TNFRSF1A-209ENST00000536717 ZNF541Q9H0D2 1346 aa22.88■■□□□ 1.25
TNFRSF1A-209ENST00000536717 JARID2Q92833 1246 aaPredicted RBP22.87■■□□□ 1.25
TNFRSF1A-209ENST00000536717 CELF1Q92879 486 aaKnown RBP22.87■■□□□ 1.25
TNFRSF1A-209ENST00000536717 TMX4Q9H1E5 349 aaPredicted RBP22.87■■□□□ 1.25
TNFRSF1A-209ENST00000536717 DUOX1Q9NRD9 1551 aa22.86■■□□□ 1.25
TNFRSF1A-209ENST00000536717 CWF19L2Q2TBE0 894 aaKnown RBP22.86■■□□□ 1.25
TNFRSF1A-209ENST00000536717 NEURL1BA8MQ27 555 aa22.85■■□□□ 1.25
TNFRSF1A-209ENST00000536717 NEXNQ0ZGT2 675 aa22.85■■□□□ 1.25
TNFRSF1A-209ENST00000536717 FKBP5Q13451 457 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF1A-209ENST00000536717 JDP2Q8WYK2 163 aa22.85■■□□□ 1.25
TNFRSF1A-209ENST00000536717 RTFDC1Q9BY42 306 aaPredicted RBP22.85■■□□□ 1.25
TNFRSF1A-209ENST00000536717 CDHR2Q9BYE9 1310 aa22.85■■□□□ 1.25
TNFRSF1A-209ENST00000536717 LTBP1Q14766 1721 aa22.85■■□□□ 1.25
TNFRSF1A-209ENST00000536717 PDE8AO60658 829 aa22.84■■□□□ 1.25
TNFRSF1A-209ENST00000536717 FSTL1Q12841 308 aa22.84■■□□□ 1.25
TNFRSF1A-209ENST00000536717 TMC4Q7Z404 712 aa22.84■■□□□ 1.25
TNFRSF1A-209ENST00000536717 LARGE2Q8N3Y3 721 aa22.84■■□□□ 1.25
TNFRSF1A-209ENST00000536717 L3MBTL3Q96JM7 780 aaPredicted RBP22.84■■□□□ 1.25
TNFRSF1A-209ENST00000536717 HSP90B1P14625 803 aaKnown RBP22.83■■□□□ 1.25
TNFRSF1A-209ENST00000536717 MPNDQ8N594 471 aa22.83■■□□□ 1.25
TNFRSF1A-209ENST00000536717 SPEF2Q9C093 1822 aa22.83■■□□□ 1.24
TNFRSF1A-209ENST00000536717 DPP8Q6V1X1 898 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF1A-209ENST00000536717 DNAAF4Q8WXU2 420 aa22.82■■□□□ 1.24
TNFRSF1A-209ENST00000536717 SEC31BQ9NQW1 1179 aa22.82■■□□□ 1.24
TNFRSF1A-209ENST00000536717 PPIP5K2O43314 1243 aa22.82■■□□□ 1.24
TNFRSF1A-209ENST00000536717 AOC3Q16853 763 aa22.82■■□□□ 1.24
TNFRSF1A-209ENST00000536717 SMC1BQ8NDV3 1235 aa22.82■■□□□ 1.24
TNFRSF1A-209ENST00000536717 VPS33BQ9H267 617 aa22.82■■□□□ 1.24
TNFRSF1A-209ENST00000536717 SUPT20HQ8NEM7 779 aa22.81■■□□□ 1.24
TNFRSF1A-209ENST00000536717 RPS8P62241 208 aaKnown RBP22.8■■□□□ 1.24
TNFRSF1A-209ENST00000536717 CCDC152Q4G0S7 254 aa22.8■■□□□ 1.24
TNFRSF1A-209ENST00000536717 IQCA1LA6NCM1 817 aa22.79■■□□□ 1.24
TNFRSF1A-209ENST00000536717 H7C1W4 665 aa22.79■■□□□ 1.24
TNFRSF1A-209ENST00000536717 HNRNPUQ00839 825 aaKnown RBP eCLIP22.79■■□□□ 1.24
TNFRSF1A-209ENST00000536717 GCKRQ14397 625 aa22.79■■□□□ 1.24
TNFRSF1A-209ENST00000536717 NIM1KQ8IY84 436 aa22.79■■□□□ 1.24
TNFRSF1A-209ENST00000536717 GPC2Q8N158 579 aa22.79■■□□□ 1.24
TNFRSF1A-209ENST00000536717 CCDC85AQ96PX6 553 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF1A-209ENST00000536717 E9PSI1 815 aa22.78■■□□□ 1.24
TNFRSF1A-209ENST00000536717 F6X3S4 739 aa22.78■■□□□ 1.24
TNFRSF1A-209ENST00000536717 POTEIP0CG38 1075 aa22.78■■□□□ 1.24
TNFRSF1A-209ENST00000536717 POTEJP0CG39 1038 aa22.78■■□□□ 1.24
TNFRSF1A-209ENST00000536717 EIF6P56537 245 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1A-209ENST00000536717 KIAA2012Q0VF49 1180 aa22.78■■□□□ 1.24
TNFRSF1A-209ENST00000536717 LINS1Q8NG48 757 aa22.78■■□□□ 1.24
TNFRSF1A-209ENST00000536717 APLP1P51693 650 aa22.77■■□□□ 1.24
TNFRSF1A-209ENST00000536717 CTSWP56202 376 aa22.77■■□□□ 1.24
TNFRSF1A-209ENST00000536717 SLFN5Q08AF3 891 aa22.77■■□□□ 1.24
TNFRSF1A-209ENST00000536717 UBE3BQ7Z3V4 1068 aa22.77■■□□□ 1.24
TNFRSF1A-209ENST00000536717 TAF1DQ9H5J8 278 aaPredicted RBP22.77■■□□□ 1.24
TNFRSF1A-209ENST00000536717 ADAMTSL1Q8N6G6 1762 aa22.77■■□□□ 1.24
TNFRSF1A-209ENST00000536717 CASP7P55210 303 aa22.77■■□□□ 1.24
TNFRSF1A-209ENST00000536717 TTLL11Q8NHH1 800 aa22.77■■□□□ 1.24
TNFRSF1A-209ENST00000536717 NSFL1CQ9UNZ2 370 aaKnown RBP22.77■■□□□ 1.24
TNFRSF1A-209ENST00000536717 GPSM2P81274 684 aa22.76■■□□□ 1.23
TNFRSF1A-209ENST00000536717 CDCA7LQ96GN5 454 aa22.76■■□□□ 1.23
TNFRSF1A-209ENST00000536717 POLLQ9UGP5 575 aa22.75■■□□□ 1.23
TNFRSF1A-209ENST00000536717 HACL1Q9UJ83 578 aa22.75■■□□□ 1.23
TNFRSF1A-209ENST00000536717 GJA3Q9Y6H8 435 aa22.75■■□□□ 1.23
TNFRSF1A-209ENST00000536717 BEND3Q5T5X7 828 aa22.74■■□□□ 1.23
TNFRSF1A-209ENST00000536717 PLA2G12BQ9BX93 195 aa22.74■■□□□ 1.23
TNFRSF1A-209ENST00000536717 ZNRF3Q9ULT6 936 aa22.74■■□□□ 1.23
TNFRSF1A-209ENST00000536717 GREM2Q9H772 168 aa22.73■■□□□ 1.23
TNFRSF1A-209ENST00000536717 RTL9Q8NET4 1388 aa22.73■■□□□ 1.23
TNFRSF1A-209ENST00000536717 SCN9AQ15858 1988 aa22.73■■□□□ 1.23
TNFRSF1A-209ENST00000536717 EPHX2P34913 555 aa22.72■■□□□ 1.23
TNFRSF1A-209ENST00000536717 SCNN1DP51172 638 aa22.72■■□□□ 1.23
TNFRSF1A-209ENST00000536717 CXCL9Q07325 125 aa22.72■■□□□ 1.23
TNFRSF1A-209ENST00000536717 PODXL2Q9NZ53 605 aa22.72■■□□□ 1.23
TNFRSF1A-209ENST00000536717 WASHC4Q2M389 1173 aa22.72■■□□□ 1.23
TNFRSF1A-209ENST00000536717 CHADLQ6NUI6 762 aa22.72■■□□□ 1.23
TNFRSF1A-209ENST00000536717 ANKRD18AQ8IVF6 992 aa22.72■■□□□ 1.23
TNFRSF1A-209ENST00000536717 TRMT2AQ8IZ69 625 aaKnown RBP22.72■■□□□ 1.23
TNFRSF1A-209ENST00000536717 TBC1D16Q8TBP0 767 aa22.72■■□□□ 1.23
TNFRSF1A-209ENST00000536717 YDJCA8MPS7 323 aa22.71■■□□□ 1.23
TNFRSF1A-209ENST00000536717 C6orf229H3BNL8 230 aa22.71■■□□□ 1.23
TNFRSF1A-209ENST00000536717 HTRA3P83110 453 aa22.71■■□□□ 1.23
TNFRSF1A-209ENST00000536717 LDHDQ86WU2 507 aa22.71■■□□□ 1.23
TNFRSF1A-209ENST00000536717 MRPL50Q8N5N7 158 aaKnown RBP22.71■■□□□ 1.23
TNFRSF1A-209ENST00000536717 CDC5LQ99459 802 aaKnown RBP22.71■■□□□ 1.23
TNFRSF1A-209ENST00000536717 GPR101Q96P66 508 aaPredicted RBP22.7■■□□□ 1.22
TNFRSF1A-209ENST00000536717 PSME4Q14997 1843 aa22.69■■□□□ 1.22
TNFRSF1A-209ENST00000536717 RIMBP2O15034 1052 aa22.69■■□□□ 1.22
TNFRSF1A-209ENST00000536717 EAPPQ56P03 285 aaPredicted RBP22.69■■□□□ 1.22
TNFRSF1A-209ENST00000536717 DNAJC5GQ8N7S2 189 aa22.69■■□□□ 1.22
TNFRSF1A-209ENST00000536717 CSF1RP07333 972 aa22.68■■□□□ 1.22
TNFRSF1A-209ENST00000536717 EPS15P42566 896 aa22.68■■□□□ 1.22
TNFRSF1A-209ENST00000536717 CIAPIN1Q6FI81 312 aa22.68■■□□□ 1.22
TNFRSF1A-209ENST00000536717 SSH1Q8WYL5 1049 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms