RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 BBOX1O75936 387 aa28.19■■■□□ 2.1
VPS37C-202ENST00000535818 FKBP4Q02790 459 aaKnown RBP eCLIP28.19■■■□□ 2.1
VPS37C-202ENST00000535818 ZNF526Q8TF50 670 aaPredicted RBP28.19■■■□□ 2.1
VPS37C-202ENST00000535818 CCDC88AQ3V6T2 1871 aa28.19■■■□□ 2.1
VPS37C-202ENST00000535818 H7C1W4 665 aa28.18■■■□□ 2.1
VPS37C-202ENST00000535818 PRELPP51888 382 aa28.18■■■□□ 2.1
VPS37C-202ENST00000535818 CCDC152Q4G0S7 254 aa28.18■■■□□ 2.1
VPS37C-202ENST00000535818 ATP6V0A2Q9Y487 856 aa28.17■■■□□ 2.1
VPS37C-202ENST00000535818 TIAM2Q8IVF5 1701 aa28.16■■■□□ 2.1
VPS37C-202ENST00000535818 GRIPAP1Q4V328 841 aa28.16■■■□□ 2.1
VPS37C-202ENST00000535818 CCDC85AQ96PX6 553 aaPredicted RBP28.16■■■□□ 2.1
VPS37C-202ENST00000535818 SRCIN1Q9C0H9 1055 aa28.16■■■□□ 2.1
VPS37C-202ENST00000535818 TAF1P21675 1872 aa28.16■■■□□ 2.1
VPS37C-202ENST00000535818 CTSWP56202 376 aa28.15■■■□□ 2.1
VPS37C-202ENST00000535818 TMC4Q7Z404 712 aa28.15■■■□□ 2.1
VPS37C-202ENST00000535818 GPBP1L1Q9HC44 474 aaPredicted RBP28.15■■■□□ 2.1
VPS37C-202ENST00000535818 ALDH1L1O75891 902 aa28.14■■■□□ 2.1
VPS37C-202ENST00000535818 RARSP54136 660 aaKnown RBP28.14■■■□□ 2.1
VPS37C-202ENST00000535818 SLC51AQ86UW1 340 aa28.14■■■□□ 2.1
VPS37C-202ENST00000535818 CELF1Q92879 486 aaKnown RBP28.14■■■□□ 2.1
VPS37C-202ENST00000535818 ZC3H4Q9UPT8 1303 aaKnown RBP28.14■■■□□ 2.09
VPS37C-202ENST00000535818 MYH3P11055 1940 aa28.14■■■□□ 2.09
VPS37C-202ENST00000535818 SP8Q8IXZ3 490 aa28.13■■■□□ 2.09
VPS37C-202ENST00000535818 PSMD1Q99460 953 aa28.13■■■□□ 2.09
VPS37C-202ENST00000535818 ZNF277Q9NRM2 450 aaPredicted RBP28.13■■■□□ 2.09
VPS37C-202ENST00000535818 SNED1Q8TER0 1413 aa28.12■■■□□ 2.09
VPS37C-202ENST00000535818 SEC31BQ9NQW1 1179 aa28.12■■■□□ 2.09
VPS37C-202ENST00000535818 C9orf78Q9NZ63 289 aaPredicted RBP28.12■■■□□ 2.09
VPS37C-202ENST00000535818 CASP7P55210 303 aa28.11■■■□□ 2.09
VPS37C-202ENST00000535818 NOB1Q9ULX3 412 aaKnown RBP28.11■■■□□ 2.09
VPS37C-202ENST00000535818 DICER1Q9UPY3 1922 aaKnown RBP28.11■■■□□ 2.09
VPS37C-202ENST00000535818 GRM8O00222 908 aa28.1■■■□□ 2.09
VPS37C-202ENST00000535818 RPS8P62241 208 aaKnown RBP28.1■■■□□ 2.09
VPS37C-202ENST00000535818 TTLL11Q8NHH1 800 aa28.1■■■□□ 2.09
VPS37C-202ENST00000535818 PLA2G12BQ9BX93 195 aa28.1■■■□□ 2.09
VPS37C-202ENST00000535818 KIF16BQ96L93 1317 aa28.1■■■□□ 2.09
VPS37C-202ENST00000535818 IARSP41252 1262 aaKnown RBP28.09■■■□□ 2.09
VPS37C-202ENST00000535818 BRPF1P55201 1214 aaPredicted RBP28.09■■■□□ 2.09
VPS37C-202ENST00000535818 DPP8Q6V1X1 898 aaPredicted RBP28.09■■■□□ 2.09
VPS37C-202ENST00000535818 MPNDQ8N594 471 aa28.09■■■□□ 2.09
VPS37C-202ENST00000535818 COL4A1P02462 1669 aa28.08■■■□□ 2.09
VPS37C-202ENST00000535818 API5Q9BZZ5 524 aaKnown RBP28.08■■■□□ 2.09
VPS37C-202ENST00000535818 KDM2BQ8NHM5 1336 aa28.08■■■□□ 2.09
VPS37C-202ENST00000535818 LRRC37AA6NMS7 1700 aa28.07■■■□□ 2.08
VPS37C-202ENST00000535818 ANKRD18AQ8IVF6 992 aa28.07■■■□□ 2.08
VPS37C-202ENST00000535818 SUPT20HQ8NEM7 779 aa28.07■■■□□ 2.08
VPS37C-202ENST00000535818 CDC5LQ99459 802 aaKnown RBP28.07■■■□□ 2.08
VPS37C-202ENST00000535818 GREM2Q9H772 168 aa28.07■■■□□ 2.08
VPS37C-202ENST00000535818 RTL9Q8NET4 1388 aa28.05■■■□□ 2.08
VPS37C-202ENST00000535818 JDP2Q8WYK2 163 aa28.04■■■□□ 2.08
VPS37C-202ENST00000535818 CHMP3Q9Y3E7 222 aa28.04■■■□□ 2.08
VPS37C-202ENST00000535818 FAM161AQ3B820 660 aa28.03■■■□□ 2.08
VPS37C-202ENST00000535818 DPY19L2Q6NUT2 758 aa28.03■■■□□ 2.08
VPS37C-202ENST00000535818 LARGE2Q8N3Y3 721 aa28.03■■■□□ 2.08
VPS37C-202ENST00000535818 NSFL1CQ9UNZ2 370 aaKnown RBP28.03■■■□□ 2.08
VPS37C-202ENST00000535818 GLTPD2A6NH11 291 aa28.02■■■□□ 2.08
VPS37C-202ENST00000535818 PPIP5K2O43314 1243 aa28.02■■■□□ 2.08
VPS37C-202ENST00000535818 BCAR3O75815 825 aa28.02■■■□□ 2.08
VPS37C-202ENST00000535818 CCT4P50991 539 aaKnown RBP28.02■■■□□ 2.08
VPS37C-202ENST00000535818 RTFDC1Q9BY42 306 aaPredicted RBP28.02■■■□□ 2.08
VPS37C-202ENST00000535818 IPO8O15397 1037 aaKnown RBP28.01■■■□□ 2.07
VPS37C-202ENST00000535818 CSF1RP07333 972 aa28.01■■■□□ 2.07
VPS37C-202ENST00000535818 ITGA6P23229 1130 aa28.01■■■□□ 2.07
VPS37C-202ENST00000535818 FRAT1Q92837 279 aaPredicted RBP28.01■■■□□ 2.07
VPS37C-202ENST00000535818 SPEF2Q9C093 1822 aa28.01■■■□□ 2.07
VPS37C-202ENST00000535818 NBPF7P0C2Y1 421 aaPredicted RBP28■■■□□ 2.07
VPS37C-202ENST00000535818 IGHMBP2P38935 993 aaKnown RBP28■■■□□ 2.07
VPS37C-202ENST00000535818 GPSM2P81274 684 aa28■■■□□ 2.07
VPS37C-202ENST00000535818 FOXO4P98177 505 aa28■■■□□ 2.07
VPS37C-202ENST00000535818 AOC3Q16853 763 aa28■■■□□ 2.07
VPS37C-202ENST00000535818 ARHGAP45Q92619 1136 aa28■■■□□ 2.07
VPS37C-202ENST00000535818 NMRK2Q9NPI5 230 aa28■■■□□ 2.07
VPS37C-202ENST00000535818 ANKRD18BA2A2Z9 1011 aa27.99■■■□□ 2.07
VPS37C-202ENST00000535818 LMBR1LQ6UX01 489 aa27.99■■■□□ 2.07
VPS37C-202ENST00000535818 NIM1KQ8IY84 436 aa27.99■■■□□ 2.07
VPS37C-202ENST00000535818 SUCLG2Q96I99 432 aa27.99■■■□□ 2.07
VPS37C-202ENST00000535818 VPS33BQ9H267 617 aa27.99■■■□□ 2.07
VPS37C-202ENST00000535818 ANKIB1Q9P2G1 1089 aa27.99■■■□□ 2.07
VPS37C-202ENST00000535818 UTYO14607 1347 aa27.98■■■□□ 2.07
VPS37C-202ENST00000535818 C6orf229H3BNL8 230 aa27.98■■■□□ 2.07
VPS37C-202ENST00000535818 DUOX1Q9NRD9 1551 aa27.98■■■□□ 2.07
VPS37C-202ENST00000535818 IFIT5Q13325 482 aaKnown RBP27.97■■■□□ 2.07
VPS37C-202ENST00000535818 EPHA10Q5JZY3 1008 aa27.97■■■□□ 2.07
VPS37C-202ENST00000535818 MPHOSPH8Q99549 860 aa27.97■■■□□ 2.07
VPS37C-202ENST00000535818 BSDC1Q9NW68 430 aaPredicted RBP27.97■■■□□ 2.07
VPS37C-202ENST00000535818 COL4A5P29400 1685 aa27.96■■■□□ 2.07
VPS37C-202ENST00000535818 ZNF541Q9H0D2 1346 aa27.95■■■□□ 2.07
VPS37C-202ENST00000535818 EIF6P56537 245 aaKnown RBP27.95■■■□□ 2.06
VPS37C-202ENST00000535818 KIAA2012Q0VF49 1180 aa27.95■■■□□ 2.06
VPS37C-202ENST00000535818 EYA3Q99504 573 aa27.95■■■□□ 2.06
VPS37C-202ENST00000535818 USP44Q9H0E7 712 aa27.95■■■□□ 2.06
VPS37C-202ENST00000535818 RRAGCQ9HB90 399 aa27.95■■■□□ 2.06
VPS37C-202ENST00000535818 FZD9O00144 591 aa27.94■■■□□ 2.06
VPS37C-202ENST00000535818 KIF3CO14782 793 aa27.94■■■□□ 2.06
VPS37C-202ENST00000535818 DDNO94850 711 aaPredicted RBP27.94■■■□□ 2.06
VPS37C-202ENST00000535818 UFL1O94874 794 aa27.94■■■□□ 2.06
VPS37C-202ENST00000535818 WASHC4Q2M389 1173 aa27.94■■■□□ 2.06
VPS37C-202ENST00000535818 CCDC57Q2TAC2 916 aa27.94■■■□□ 2.06
VPS37C-202ENST00000535818 TAF7LQ5H9L4 462 aa27.94■■■□□ 2.06
VPS37C-202ENST00000535818 ATF7IPQ6VMQ6 1270 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms