RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 DDX58O95786 925 aaKnown RBP21.04■□□□□ 0.96
ATL3-202ENST00000535789 PCCAP05165 728 aaPredicted RBP21.04■□□□□ 0.96
ATL3-202ENST00000535789 GRAPQ13588 217 aa21.04■□□□□ 0.96
ATL3-202ENST00000535789 CWF19L2Q2TBE0 894 aaKnown RBP21.04■□□□□ 0.96
ATL3-202ENST00000535789 GRAPLQ8TC17 118 aaPredicted RBP21.04■□□□□ 0.96
ATL3-202ENST00000535789 CELF1Q92879 486 aaKnown RBP21.04■□□□□ 0.96
ATL3-202ENST00000535789 MYH16Q9H6N6 1097 aa21.04■□□□□ 0.96
ATL3-202ENST00000535789 CWC25Q9NXE8 425 aaPredicted RBP21.04■□□□□ 0.96
ATL3-202ENST00000535789 SCN9AQ15858 1988 aa21.04■□□□□ 0.96
ATL3-202ENST00000535789 CC2D2BQ6DHV5 1058 aa21.03■□□□□ 0.96
ATL3-202ENST00000535789 CHMP4AQ9BY43 222 aa21.03■□□□□ 0.96
ATL3-202ENST00000535789 NEURL1BA8MQ27 555 aa21.02■□□□□ 0.96
ATL3-202ENST00000535789 DDNO94850 711 aaPredicted RBP21.02■□□□□ 0.96
ATL3-202ENST00000535789 CDHR2Q9BYE9 1310 aa21.02■□□□□ 0.95
ATL3-202ENST00000535789 TOMM70O94826 608 aa21.01■□□□□ 0.95
ATL3-202ENST00000535789 DDX46Q7L014 1031 aaKnown RBP21.01■□□□□ 0.95
ATL3-202ENST00000535789 CDCA7LQ96GN5 454 aa21■□□□□ 0.95
ATL3-202ENST00000535789 SEC31BQ9NQW1 1179 aa21■□□□□ 0.95
ATL3-202ENST00000535789 FZD9O00144 591 aa20.99■□□□□ 0.95
ATL3-202ENST00000535789 FKBP5Q13451 457 aaPredicted RBP20.99■□□□□ 0.95
ATL3-202ENST00000535789 SP8Q8IXZ3 490 aa20.99■□□□□ 0.95
ATL3-202ENST00000535789 RTFDC1Q9BY42 306 aaPredicted RBP20.99■□□□□ 0.95
ATL3-202ENST00000535789 F6X3S4 739 aa20.98■□□□□ 0.95
ATL3-202ENST00000535789 BBOX1O75936 387 aa20.98■□□□□ 0.95
ATL3-202ENST00000535789 CASP7P55210 303 aa20.98■□□□□ 0.95
ATL3-202ENST00000535789 SLFN5Q08AF3 891 aa20.98■□□□□ 0.95
ATL3-202ENST00000535789 RBM46Q8TBY0 533 aaKnown RBP20.98■□□□□ 0.95
ATL3-202ENST00000535789 DNAAF4Q8WXU2 420 aa20.98■□□□□ 0.95
ATL3-202ENST00000535789 L3MBTL3Q96JM7 780 aaPredicted RBP20.97■□□□□ 0.95
ATL3-202ENST00000535789 PDE8AO60658 829 aa20.96■□□□□ 0.95
ATL3-202ENST00000535789 VEGFAP15692 232 aaPredicted RBP20.96■□□□□ 0.95
ATL3-202ENST00000535789 HSPA6P17066 643 aa20.96■□□□□ 0.95
ATL3-202ENST00000535789 AOC3Q16853 763 aa20.96■□□□□ 0.95
ATL3-202ENST00000535789 GRIPAP1Q4V328 841 aa20.96■□□□□ 0.95
ATL3-202ENST00000535789 CCDC85AQ96PX6 553 aaPredicted RBP20.96■□□□□ 0.95
ATL3-202ENST00000535789 E9PSI1 815 aa20.95■□□□□ 0.94
ATL3-202ENST00000535789 H7C1W4 665 aa20.95■□□□□ 0.94
ATL3-202ENST00000535789 POTEIP0CG38 1075 aa20.95■□□□□ 0.94
ATL3-202ENST00000535789 POTEJP0CG39 1038 aa20.95■□□□□ 0.94
ATL3-202ENST00000535789 NEXNQ0ZGT2 675 aa20.95■□□□□ 0.94
ATL3-202ENST00000535789 GCKRQ14397 625 aa20.95■□□□□ 0.94
ATL3-202ENST00000535789 DPY19L2Q6NUT2 758 aa20.95■□□□□ 0.94
ATL3-202ENST00000535789 TRMT2AQ8IZ69 625 aaKnown RBP20.95■□□□□ 0.94
ATL3-202ENST00000535789 CTSWP56202 376 aa20.94■□□□□ 0.94
ATL3-202ENST00000535789 DPP8Q6V1X1 898 aaPredicted RBP20.94■□□□□ 0.94
ATL3-202ENST00000535789 UBE3BQ7Z3V4 1068 aa20.94■□□□□ 0.94
ATL3-202ENST00000535789 MPNDQ8N594 471 aa20.94■□□□□ 0.94
ATL3-202ENST00000535789 PPIP5K2O43314 1243 aa20.93■□□□□ 0.94
ATL3-202ENST00000535789 BEND3Q5T5X7 828 aa20.93■□□□□ 0.94
ATL3-202ENST00000535789 TMC4Q7Z404 712 aa20.93■□□□□ 0.94
ATL3-202ENST00000535789 LARGE2Q8N3Y3 721 aa20.93■□□□□ 0.94
ATL3-202ENST00000535789 LINS1Q8NG48 757 aa20.93■□□□□ 0.94
ATL3-202ENST00000535789 GPSM2P81274 684 aa20.92■□□□□ 0.94
ATL3-202ENST00000535789 C16orf71Q8IYS4 520 aaPredicted RBP20.92■□□□□ 0.94
ATL3-202ENST00000535789 MRPL50Q8N5N7 158 aaKnown RBP20.92■□□□□ 0.94
ATL3-202ENST00000535789 TTLL11Q8NHH1 800 aa20.92■□□□□ 0.94
ATL3-202ENST00000535789 GREM2Q9H772 168 aa20.92■□□□□ 0.94
ATL3-202ENST00000535789 RTL9Q8NET4 1388 aa20.92■□□□□ 0.94
ATL3-202ENST00000535789 RPS8P62241 208 aaKnown RBP20.91■□□□□ 0.94
ATL3-202ENST00000535789 KIAA2012Q0VF49 1180 aa20.91■□□□□ 0.94
ATL3-202ENST00000535789 CCDC152Q4G0S7 254 aa20.91■□□□□ 0.94
ATL3-202ENST00000535789 GPR101Q96P66 508 aaPredicted RBP20.91■□□□□ 0.94
ATL3-202ENST00000535789 POLLQ9UGP5 575 aa20.91■□□□□ 0.94
ATL3-202ENST00000535789 GPC2Q8N158 579 aa20.9■□□□□ 0.94
ATL3-202ENST00000535789 JDP2Q8WYK2 163 aa20.9■□□□□ 0.94
ATL3-202ENST00000535789 SSH1Q8WYL5 1049 aa20.9■□□□□ 0.94
ATL3-202ENST00000535789 PLA2G12BQ9BX93 195 aa20.9■□□□□ 0.94
ATL3-202ENST00000535789 PCNTO95613 3336 aa20.9■□□□□ 0.94
ATL3-202ENST00000535789 YDJCA8MPS7 323 aa20.89■□□□□ 0.93
ATL3-202ENST00000535789 FSTL1Q12841 308 aa20.89■□□□□ 0.93
ATL3-202ENST00000535789 NIM1KQ8IY84 436 aa20.89■□□□□ 0.93
ATL3-202ENST00000535789 TAF1DQ9H5J8 278 aaPredicted RBP20.89■□□□□ 0.93
ATL3-202ENST00000535789 SCNN1DP51172 638 aa20.88■□□□□ 0.93
ATL3-202ENST00000535789 SMC1BQ8NDV3 1235 aa20.88■□□□□ 0.93
ATL3-202ENST00000535789 SUPT20HQ8NEM7 779 aa20.88■□□□□ 0.93
ATL3-202ENST00000535789 BCL2L13Q9BXK5 485 aa20.88■□□□□ 0.93
ATL3-202ENST00000535789 VPS33BQ9H267 617 aa20.88■□□□□ 0.93
ATL3-202ENST00000535789 TRPM7Q96QT4 1865 aa20.88■□□□□ 0.93
ATL3-202ENST00000535789 HSP90B1P14625 803 aaKnown RBP20.87■□□□□ 0.93
ATL3-202ENST00000535789 HTRA3P83110 453 aa20.87■□□□□ 0.93
ATL3-202ENST00000535789 FAM161AQ3B820 660 aa20.87■□□□□ 0.93
ATL3-202ENST00000535789 TMX4Q9H1E5 349 aaPredicted RBP20.87■□□□□ 0.93
ATL3-202ENST00000535789 NSFL1CQ9UNZ2 370 aaKnown RBP20.87■□□□□ 0.93
ATL3-202ENST00000535789 WTIPA6NIX2 430 aaPredicted RBP20.86■□□□□ 0.93
ATL3-202ENST00000535789 EIF6P56537 245 aaKnown RBP20.86■□□□□ 0.93
ATL3-202ENST00000535789 CXCL9Q07325 125 aa20.86■□□□□ 0.93
ATL3-202ENST00000535789 EPHA10Q5JZY3 1008 aa20.86■□□□□ 0.93
ATL3-202ENST00000535789 TBC1D16Q8TBP0 767 aa20.86■□□□□ 0.93
ATL3-202ENST00000535789 PODXL2Q9NZ53 605 aa20.86■□□□□ 0.93
ATL3-202ENST00000535789 GJA3Q9Y6H8 435 aa20.86■□□□□ 0.93
ATL3-202ENST00000535789 POLR2AP24928 1970 aaKnown RBP20.86■□□□□ 0.93
ATL3-202ENST00000535789 CSF1RP07333 972 aa20.85■□□□□ 0.93
ATL3-202ENST00000535789 FOXO4P98177 505 aa20.85■□□□□ 0.93
ATL3-202ENST00000535789 HACL1Q9UJ83 578 aa20.85■□□□□ 0.93
ATL3-202ENST00000535789 ZNRF3Q9ULT6 936 aa20.85■□□□□ 0.93
ATL3-202ENST00000535789 IQCA1LA6NCM1 817 aa20.84■□□□□ 0.93
ATL3-202ENST00000535789 DBNDD1Q9H9R9 158 aa20.84■□□□□ 0.93
ATL3-202ENST00000535789 EPHX2P34913 555 aa20.83■□□□□ 0.93
ATL3-202ENST00000535789 EPS15P42566 896 aa20.83■□□□□ 0.93
ATL3-202ENST00000535789 SLC4A10Q6U841 1118 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms