RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 MPNDQ8N594 471 aa26.79■■□□□ 1.88
LTBR-205ENST00000535739 GRAPLQ8TC17 118 aaPredicted RBP26.79■■□□□ 1.88
LTBR-205ENST00000535739 ATP5J2-PTCD1G3V325 749 aa26.78■■□□□ 1.88
LTBR-205ENST00000535739 ISCA1Q9BUE6 129 aa26.78■■□□□ 1.88
LTBR-205ENST00000535739 CXCL9Q07325 125 aa26.77■■□□□ 1.88
LTBR-205ENST00000535739 FAM89AQ96GI7 184 aa26.77■■□□□ 1.88
LTBR-205ENST00000535739 ZNRF3Q9ULT6 936 aa26.77■■□□□ 1.88
LTBR-205ENST00000535739 APAF1O14727 1248 aa26.76■■□□□ 1.87
LTBR-205ENST00000535739 ZNF853P0CG23 659 aa26.76■■□□□ 1.87
LTBR-205ENST00000535739 HYPKQ9NX55 129 aa26.76■■□□□ 1.87
LTBR-205ENST00000535739 CAPN15O75808 1086 aa26.75■■□□□ 1.87
LTBR-205ENST00000535739 FMR1Q06787 632 aaKnown RBP eCLIP26.75■■□□□ 1.87
LTBR-205ENST00000535739 USP50Q70EL3 339 aaPredicted RBP26.75■■□□□ 1.87
LTBR-205ENST00000535739 GPRC5DQ9NZD1 345 aa26.75■■□□□ 1.87
LTBR-205ENST00000535739 TRPM7Q96QT4 1865 aa26.74■■□□□ 1.87
LTBR-205ENST00000535739 KIAA2012Q0VF49 1180 aa26.74■■□□□ 1.87
LTBR-205ENST00000535739 LRRC37AA6NMS7 1700 aa26.73■■□□□ 1.87
LTBR-205ENST00000535739 RASSF10A6NK89 507 aa26.73■■□□□ 1.87
LTBR-205ENST00000535739 FOXN1O15353 648 aa26.73■■□□□ 1.87
LTBR-205ENST00000535739 DEFB115Q30KQ5 88 aa26.73■■□□□ 1.87
LTBR-205ENST00000535739 RTL5Q5HYW3 569 aaPredicted RBP26.73■■□□□ 1.87
LTBR-205ENST00000535739 DUOX1Q9NRD9 1551 aa26.72■■□□□ 1.87
LTBR-205ENST00000535739 ELL2O00472 640 aaPredicted RBP26.72■■□□□ 1.87
LTBR-205ENST00000535739 GMPSP49915 693 aaPredicted RBP26.72■■□□□ 1.87
LTBR-205ENST00000535739 ADARB2Q9NS39 739 aaKnown RBP26.72■■□□□ 1.87
LTBR-205ENST00000535739 ABT1Q9ULW3 272 aaKnown RBP26.72■■□□□ 1.87
LTBR-205ENST00000535739 COL4A1P02462 1669 aa26.71■■□□□ 1.87
LTBR-205ENST00000535739 RAD17O75943 681 aa26.71■■□□□ 1.87
LTBR-205ENST00000535739 SF3B3Q15393 1217 aaKnown RBP26.71■■□□□ 1.87
LTBR-205ENST00000535739 CIAPIN1Q6FI81 312 aa26.71■■□□□ 1.87
LTBR-205ENST00000535739 TMC4Q7Z404 712 aa26.71■■□□□ 1.87
LTBR-205ENST00000535739 CELF1Q92879 486 aaKnown RBP26.71■■□□□ 1.87
LTBR-205ENST00000535739 IFT57Q9NWB7 429 aa26.71■■□□□ 1.87
LTBR-205ENST00000535739 GNAI1P63096 354 aa26.7■■□□□ 1.86
LTBR-205ENST00000535739 PHAXQ9H814 394 aaKnown RBP26.7■■□□□ 1.86
LTBR-205ENST00000535739 TRAF5O00463 557 aa26.69■■□□□ 1.86
LTBR-205ENST00000535739 TRIM28Q13263 835 aaKnown RBP26.69■■□□□ 1.86
LTBR-205ENST00000535739 RIC3Q7Z5B4 369 aa26.69■■□□□ 1.86
LTBR-205ENST00000535739 YDJCA8MPS7 323 aa26.68■■□□□ 1.86
LTBR-205ENST00000535739 IRS4O14654 1257 aaPredicted RBP26.68■■□□□ 1.86
LTBR-205ENST00000535739 WDR33Q9C0J8 1336 aaKnown RBP26.67■■□□□ 1.86
LTBR-205ENST00000535739 CALD1Q05682 793 aaKnown RBP26.67■■□□□ 1.86
LTBR-205ENST00000535739 GOLGA2Q08379 1002 aa26.67■■□□□ 1.86
LTBR-205ENST00000535739 TNIP1Q15025 636 aa26.67■■□□□ 1.86
LTBR-205ENST00000535739 AIDAQ96BJ3 306 aa26.67■■□□□ 1.86
LTBR-205ENST00000535739 BCL2L13Q9BXK5 485 aa26.67■■□□□ 1.86
LTBR-205ENST00000535739 NSFL1CQ9UNZ2 370 aaKnown RBP26.67■■□□□ 1.86
LTBR-205ENST00000535739 CST9Q5W186 159 aa26.66■■□□□ 1.86
LTBR-205ENST00000535739 C8orf58Q8NAV2 365 aa26.66■■□□□ 1.86
LTBR-205ENST00000535739 WBP1LQ9NX94 342 aa26.66■■□□□ 1.86
LTBR-205ENST00000535739 MYD88Q99836 296 aa26.65■■□□□ 1.86
LTBR-205ENST00000535739 CTCFP49711 727 aaPredicted RBP26.64■■□□□ 1.86
LTBR-205ENST00000535739 GPSM2P81274 684 aa26.64■■□□□ 1.86
LTBR-205ENST00000535739 WASHC4Q2M389 1173 aa26.64■■□□□ 1.86
LTBR-205ENST00000535739 POLLQ9UGP5 575 aa26.64■■□□□ 1.86
LTBR-205ENST00000535739 CDHR2Q9BYE9 1310 aa26.64■■□□□ 1.85
LTBR-205ENST00000535739 SHTN1A0MZ66 631 aa26.63■■□□□ 1.85
LTBR-205ENST00000535739 C6orf229H3BNL8 230 aa26.63■■□□□ 1.85
LTBR-205ENST00000535739 RIMBP2O15034 1052 aa26.63■■□□□ 1.85
LTBR-205ENST00000535739 ZBTB38Q8NAP3 1195 aaPredicted RBP26.63■■□□□ 1.85
LTBR-205ENST00000535739 DBNDD1Q9H9R9 158 aa26.63■■□□□ 1.85
LTBR-205ENST00000535739 HIRAP54198 1017 aaPredicted RBP26.62■■□□□ 1.85
LTBR-205ENST00000535739 RPS8P62241 208 aaKnown RBP26.62■■□□□ 1.85
LTBR-205ENST00000535739 PAXIP1Q6ZW49 1069 aaPredicted RBP26.62■■□□□ 1.85
LTBR-205ENST00000535739 TRPM4Q8TD43 1214 aa26.62■■□□□ 1.85
LTBR-205ENST00000535739 GLIS2Q9BZE0 524 aaPredicted RBP26.62■■□□□ 1.85
LTBR-205ENST00000535739 PRDM10Q9NQV6 1147 aa26.62■■□□□ 1.85
LTBR-205ENST00000535739 CNOT7Q9UIV1 285 aaKnown RBP26.62■■□□□ 1.85
LTBR-205ENST00000535739 SEC31BQ9NQW1 1179 aa26.61■■□□□ 1.85
LTBR-205ENST00000535739 PGAP2Q9UHJ9 254 aa26.61■■□□□ 1.85
LTBR-205ENST00000535739 ZBTB12Q9Y330 459 aaPredicted RBP26.61■■□□□ 1.85
LTBR-205ENST00000535739 CCDC184Q52MB2 194 aa26.6■■□□□ 1.85
LTBR-205ENST00000535739 CYP4F22Q6NT55 531 aa26.6■■□□□ 1.85
LTBR-205ENST00000535739 JARID2Q92833 1246 aaPredicted RBP26.6■■□□□ 1.85
LTBR-205ENST00000535739 CAPNS2Q96L46 248 aa26.6■■□□□ 1.85
LTBR-205ENST00000535739 GPR101Q96P66 508 aaPredicted RBP26.6■■□□□ 1.85
LTBR-205ENST00000535739 POLR2AP24928 1970 aaKnown RBP26.6■■□□□ 1.85
LTBR-205ENST00000535739 H7C1D1 291 aa26.59■■□□□ 1.85
LTBR-205ENST00000535739 PSMD14O00487 310 aa26.59■■□□□ 1.85
LTBR-205ENST00000535739 LBX1P52954 281 aa26.59■■□□□ 1.85
LTBR-205ENST00000535739 GRM1Q13255 1194 aa26.59■■□□□ 1.85
LTBR-205ENST00000535739 MICALL2Q8IY33 904 aa26.59■■□□□ 1.85
LTBR-205ENST00000535739 TSPYL6Q8N831 410 aa26.59■■□□□ 1.85
LTBR-205ENST00000535739 CCDC191Q8NCU4 936 aa26.59■■□□□ 1.85
LTBR-205ENST00000535739 TLL2Q9Y6L7 1015 aa26.59■■□□□ 1.85
LTBR-205ENST00000535739 CELF2O95319 508 aaKnown RBP26.58■■□□□ 1.85
LTBR-205ENST00000535739 MAP2K1Q02750 393 aaPredicted RBP26.58■■□□□ 1.85
LTBR-205ENST00000535739 DOK7Q18PE1 504 aa26.58■■□□□ 1.85
LTBR-205ENST00000535739 CCDC30Q5VVM6 783 aa26.58■■□□□ 1.85
LTBR-205ENST00000535739 TBC1D16Q8TBP0 767 aa26.58■■□□□ 1.85
LTBR-205ENST00000535739 ZC3H15Q8WU90 426 aaKnown RBP26.58■■□□□ 1.85
LTBR-205ENST00000535739 THSD7BQ9C0I4 1608 aa26.57■■□□□ 1.84
LTBR-205ENST00000535739 SCN9AQ15858 1988 aa26.57■■□□□ 1.84
LTBR-205ENST00000535739 PCCAP05165 728 aaPredicted RBP26.57■■□□□ 1.84
LTBR-205ENST00000535739 ECE1P42892 770 aa26.57■■□□□ 1.84
LTBR-205ENST00000535739 EYA3Q99504 573 aa26.57■■□□□ 1.84
LTBR-205ENST00000535739 METTL22Q9BUU2 404 aaPredicted RBP26.57■■□□□ 1.84
LTBR-205ENST00000535739 KCNQ5Q9NR82 932 aa26.57■■□□□ 1.84
LTBR-205ENST00000535739 CWC25Q9NXE8 425 aaPredicted RBP26.57■■□□□ 1.84
LTBR-205ENST00000535739 ECE2O60344 883 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms