RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 TARSP26639 723 aaKnown RBP9.72□□□□□ -0.85
PRKDC-205ENST00000535375 MTMR3Q13615 1198 aa9.72□□□□□ -0.85
PRKDC-205ENST00000535375 PCSK7Q16549 785 aa9.72□□□□□ -0.85
PRKDC-205ENST00000535375 ALKBH2Q6NS38 261 aa9.72□□□□□ -0.85
PRKDC-205ENST00000535375 TTC16Q8NEE8 873 aa9.72□□□□□ -0.85
PRKDC-205ENST00000535375 CNTNAP5Q8WYK1 1306 aa9.72□□□□□ -0.85
PRKDC-205ENST00000535375 MAP3K6O95382 1288 aa9.71□□□□□ -0.86
PRKDC-205ENST00000535375 EGFRP00533 1210 aa9.71□□□□□ -0.86
PRKDC-205ENST00000535375 PCSK2P16519 638 aa9.71□□□□□ -0.86
PRKDC-205ENST00000535375 SNRPNP63162 240 aaKnown RBP9.71□□□□□ -0.86
PRKDC-205ENST00000535375 FKBP4Q02790 459 aaKnown RBP eCLIP9.71□□□□□ -0.86
PRKDC-205ENST00000535375 SF3B2Q13435 895 aaKnown RBP9.71□□□□□ -0.86
PRKDC-205ENST00000535375 KCNMB2Q9Y691 235 aa9.71□□□□□ -0.86
PRKDC-205ENST00000535375 MPSTP25325 297 aa9.7□□□□□ -0.86
PRKDC-205ENST00000535375 ATCAYQ86WG3 371 aa9.7□□□□□ -0.86
PRKDC-205ENST00000535375 ANO2Q9NQ90 1003 aa9.7□□□□□ -0.86
PRKDC-205ENST00000535375 DNAJB12Q9NXW2 375 aaKnown RBP9.7□□□□□ -0.86
PRKDC-205ENST00000535375 ZFATQ9P243 1243 aa9.7□□□□□ -0.86
PRKDC-205ENST00000535375 RPLP1P05386 114 aaKnown RBP9.69□□□□□ -0.86
PRKDC-205ENST00000535375 EIF1AXP47813 144 aaKnown RBP9.69□□□□□ -0.86
PRKDC-205ENST00000535375 ZNF211Q13398 564 aaPredicted RBP9.69□□□□□ -0.86
PRKDC-205ENST00000535375 DHX32Q7L7V1 743 aaKnown RBP9.69□□□□□ -0.86
PRKDC-205ENST00000535375 NLRP13Q86W25 1043 aa9.69□□□□□ -0.86
PRKDC-205ENST00000535375 SLC6A14Q9UN76 642 aa9.69□□□□□ -0.86
PRKDC-205ENST00000535375 PSAPP07602 524 aa9.68□□□□□ -0.86
PRKDC-205ENST00000535375 DNM1Q05193 864 aaKnown RBP9.68□□□□□ -0.86
PRKDC-205ENST00000535375 EDEM1Q92611 657 aa9.68□□□□□ -0.86
PRKDC-205ENST00000535375 MDFIQ99750 246 aa9.68□□□□□ -0.86
PRKDC-205ENST00000535375 GNB5O14775 395 aa9.67□□□□□ -0.86
PRKDC-205ENST00000535375 DGKGP49619 791 aa9.67□□□□□ -0.86
PRKDC-205ENST00000535375 TRIP4Q15650 581 aaPredicted RBP9.67□□□□□ -0.86
PRKDC-205ENST00000535375 CCER1Q8TC90 406 aaPredicted RBP9.67□□□□□ -0.86
PRKDC-205ENST00000535375 NUDT16Q96DE0 195 aaKnown RBP9.67□□□□□ -0.86
PRKDC-205ENST00000535375 TLR7Q9NYK1 1049 aaKnown RBP9.67□□□□□ -0.86
PRKDC-205ENST00000535375 M0R082 166 aa9.66□□□□□ -0.86
PRKDC-205ENST00000535375 TTC39BQ5VTQ0 682 aaPredicted RBP9.66□□□□□ -0.86
PRKDC-205ENST00000535375 FAM35AQ86V20 835 aa9.66□□□□□ -0.86
PRKDC-205ENST00000535375 ZNF417Q8TAU3 575 aa9.66□□□□□ -0.86
PRKDC-205ENST00000535375 ZNF587Q96SQ5 575 aaPredicted RBP9.66□□□□□ -0.86
PRKDC-205ENST00000535375 EGFL7Q9UHF1 273 aa9.66□□□□□ -0.86
PRKDC-205ENST00000535375 MMP20O60882 483 aa9.65□□□□□ -0.86
PRKDC-205ENST00000535375 BRD1O95696 1058 aa9.65□□□□□ -0.86
PRKDC-205ENST00000535375 NPR3P17342 541 aa9.65□□□□□ -0.86
PRKDC-205ENST00000535375 MZF1P28698 734 aaPredicted RBP9.65□□□□□ -0.86
PRKDC-205ENST00000535375 SERPINB4P48594 390 aa9.65□□□□□ -0.86
PRKDC-205ENST00000535375 PLAURQ03405 335 aa9.65□□□□□ -0.86
PRKDC-205ENST00000535375 LINC00114Q6XXX2 140 aa9.65□□□□□ -0.86
PRKDC-205ENST00000535375 GLYCTKQ8IVS8 523 aa9.65□□□□□ -0.86
PRKDC-205ENST00000535375 TRPM4Q8TD43 1214 aa9.65□□□□□ -0.86
PRKDC-205ENST00000535375 STARD13Q9Y3M8 1113 aa9.65□□□□□ -0.86
PRKDC-205ENST00000535375 H3BRB1 525 aa9.64□□□□□ -0.87
PRKDC-205ENST00000535375 ICMTO60725 284 aa9.64□□□□□ -0.87
PRKDC-205ENST00000535375 CPB1P15086 417 aa9.64□□□□□ -0.87
PRKDC-205ENST00000535375 HOXB4P17483 251 aaPredicted RBP9.64□□□□□ -0.87
PRKDC-205ENST00000535375 MLLT1Q03111 559 aaPredicted RBP9.64□□□□□ -0.87
PRKDC-205ENST00000535375 C8orf34Q49A92 452 aa9.64□□□□□ -0.87
PRKDC-205ENST00000535375 MICALL1Q8N3F8 863 aa9.64□□□□□ -0.87
PRKDC-205ENST00000535375 TUT1Q9H6E5 874 aaKnown RBP9.64□□□□□ -0.87
PRKDC-205ENST00000535375 NOP53Q9NZM5 478 aaKnown RBP9.64□□□□□ -0.87
PRKDC-205ENST00000535375 LILRB5O75023 590 aa9.63□□□□□ -0.87
PRKDC-205ENST00000535375 ALBP02768 609 aa9.63□□□□□ -0.87
PRKDC-205ENST00000535375 PDGFAP04085 211 aa9.63□□□□□ -0.87
PRKDC-205ENST00000535375 NRLP54845 237 aa9.63□□□□□ -0.87
PRKDC-205ENST00000535375 GPLD1P80108 840 aa9.63□□□□□ -0.87
PRKDC-205ENST00000535375 PSAPL1Q6NUJ1 521 aa9.63□□□□□ -0.87
PRKDC-205ENST00000535375 ZNF438Q7Z4V0 828 aa9.63□□□□□ -0.87
PRKDC-205ENST00000535375 NUDT8Q8WV74 236 aa9.63□□□□□ -0.87
PRKDC-205ENST00000535375 JPH1Q9HDC5 661 aaPredicted RBP9.63□□□□□ -0.87
PRKDC-205ENST00000535375 SPDYE3A6NKU9 549 aa9.62□□□□□ -0.87
PRKDC-205ENST00000535375 RGS9O75916 674 aaPredicted RBP9.62□□□□□ -0.87
PRKDC-205ENST00000535375 USP5P45974 858 aa9.62□□□□□ -0.87
PRKDC-205ENST00000535375 PDE12Q6L8Q7 609 aaKnown RBP9.62□□□□□ -0.87
PRKDC-205ENST00000535375 GPAT2Q6NUI2 795 aa9.62□□□□□ -0.87
PRKDC-205ENST00000535375 ELMSAN1Q6PJG2 1045 aa9.62□□□□□ -0.87
PRKDC-205ENST00000535375 HFE2Q6ZVN8 426 aa9.62□□□□□ -0.87
PRKDC-205ENST00000535375 TXNDC2Q86VQ3 553 aa9.62□□□□□ -0.87
PRKDC-205ENST00000535375 RBSNQ9H1K0 784 aa9.62□□□□□ -0.87
PRKDC-205ENST00000535375 ELP3Q9H9T3 547 aa9.62□□□□□ -0.87
PRKDC-205ENST00000535375 POLIQ9UNA4 740 aa9.62□□□□□ -0.87
PRKDC-205ENST00000535375 ZBTB42B2RXF5 422 aa9.61□□□□□ -0.87
PRKDC-205ENST00000535375 EIF2AK2P19525 551 aaKnown RBP9.61□□□□□ -0.87
PRKDC-205ENST00000535375 SOX18P35713 384 aa9.61□□□□□ -0.87
PRKDC-205ENST00000535375 DCAF5Q96JK2 942 aa9.61□□□□□ -0.87
PRKDC-205ENST00000535375 NSUN5Q96P11 429 aaKnown RBP9.61□□□□□ -0.87
PRKDC-205ENST00000535375 PRDM6Q9NQX0 595 aa9.61□□□□□ -0.87
PRKDC-205ENST00000535375 ABI2Q9NYB9 513 aaPredicted RBP9.61□□□□□ -0.87
PRKDC-205ENST00000535375 LOC102724428A0A0B4J2F2 783 aa9.6□□□□□ -0.87
PRKDC-205ENST00000535375 GHRHP01286 108 aa9.6□□□□□ -0.87
PRKDC-205ENST00000535375 SIK1P57059 783 aa9.6□□□□□ -0.87
PRKDC-205ENST00000535375 C8orf86Q6ZUL3 223 aa9.6□□□□□ -0.87
PRKDC-205ENST00000535375 PLVAPQ9BX97 442 aa9.6□□□□□ -0.87
PRKDC-205ENST00000535375 NAGPAQ9UK23 515 aa9.6□□□□□ -0.87
PRKDC-205ENST00000535375 IGHA1P01876 353 aa9.59□□□□□ -0.87
PRKDC-205ENST00000535375 C20orf204Q6ZNR8 217 aa9.59□□□□□ -0.87
PRKDC-205ENST00000535375 OR13H1Q8NG92 308 aa9.59□□□□□ -0.87
PRKDC-205ENST00000535375 GGNBP2Q9H3C7 697 aa9.59□□□□□ -0.87
PRKDC-205ENST00000535375 BRPF3Q9ULD4 1205 aa9.59□□□□□ -0.87
PRKDC-205ENST00000535375 J3QW42 95 aa9.58□□□□□ -0.88
PRKDC-205ENST00000535375 EHHADHQ08426 723 aa9.58□□□□□ -0.88
PRKDC-205ENST00000535375 HYAL2Q12891 473 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms