RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 MPNDQ8N594 471 aa16.34■□□□□ 0.21
USF1-211ENST00000534633 PRDM10Q9NQV6 1147 aa16.34■□□□□ 0.21
USF1-211ENST00000534633 GPRC5DQ9NZD1 345 aa16.34■□□□□ 0.21
USF1-211ENST00000534633 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
USF1-211ENST00000534633 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
USF1-211ENST00000534633 LAS1LQ9Y4W2 734 aaKnown RBP16.34■□□□□ 0.21
USF1-211ENST00000534633 DUOX1Q9NRD9 1551 aa16.34■□□□□ 0.21
USF1-211ENST00000534633 CTCFP49711 727 aaPredicted RBP16.33■□□□□ 0.2
USF1-211ENST00000534633 KIAA2012Q0VF49 1180 aa16.33■□□□□ 0.2
USF1-211ENST00000534633 GRAPQ13588 217 aa16.33■□□□□ 0.2
USF1-211ENST00000534633 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.2
USF1-211ENST00000534633 TMC4Q7Z404 712 aa16.33■□□□□ 0.2
USF1-211ENST00000534633 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
USF1-211ENST00000534633 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
USF1-211ENST00000534633 ABT1Q9ULW3 272 aaKnown RBP16.33■□□□□ 0.2
USF1-211ENST00000534633 ADAMTS8Q9UP79 889 aa16.33■□□□□ 0.2
USF1-211ENST00000534633 CXCL9Q07325 125 aa16.32■□□□□ 0.2
USF1-211ENST00000534633 CDHR2Q9BYE9 1310 aa16.32■□□□□ 0.2
USF1-211ENST00000534633 WDR33Q9C0J8 1336 aaKnown RBP16.32■□□□□ 0.2
USF1-211ENST00000534633 ADARB2Q9NS39 739 aaKnown RBP16.32■□□□□ 0.2
USF1-211ENST00000534633 WBP1LQ9NX94 342 aa16.32■□□□□ 0.2
USF1-211ENST00000534633 DBF4Q9UBU7 674 aaPredicted RBP16.32■□□□□ 0.2
USF1-211ENST00000534633 ANKRD13DQ6ZTN6 518 aa16.31■□□□□ 0.2
USF1-211ENST00000534633 MAP2K1Q02750 393 aaPredicted RBP16.3■□□□□ 0.2
USF1-211ENST00000534633 CIAPIN1Q6FI81 312 aa16.3■□□□□ 0.2
USF1-211ENST00000534633 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
USF1-211ENST00000534633 ISCA1Q9BUE6 129 aa16.3■□□□□ 0.2
USF1-211ENST00000534633 GMPSP49915 693 aaPredicted RBP16.29■□□□□ 0.2
USF1-211ENST00000534633 TNIP1Q15025 636 aa16.29■□□□□ 0.2
USF1-211ENST00000534633 HYPKQ9NX55 129 aa16.29■□□□□ 0.2
USF1-211ENST00000534633 ECE1P42892 770 aa16.28■□□□□ 0.2
USF1-211ENST00000534633 FMR1Q06787 632 aaKnown RBP eCLIP16.28■□□□□ 0.2
USF1-211ENST00000534633 SF3B3Q15393 1217 aaKnown RBP16.28■□□□□ 0.2
USF1-211ENST00000534633 DUSP27Q5VZP5 1158 aa16.28■□□□□ 0.2
USF1-211ENST00000534633 CST9Q5W186 159 aa16.28■□□□□ 0.2
USF1-211ENST00000534633 BCL2L13Q9BXK5 485 aa16.28■□□□□ 0.2
USF1-211ENST00000534633 TRAF5O00463 557 aa16.27■□□□□ 0.2
USF1-211ENST00000534633 TRIM28Q13263 835 aaKnown RBP16.27■□□□□ 0.2
USF1-211ENST00000534633 FAM89AQ96GI7 184 aa16.27■□□□□ 0.2
USF1-211ENST00000534633 CAPNS2Q96L46 248 aa16.27■□□□□ 0.2
USF1-211ENST00000534633 PGAP2Q9UHJ9 254 aa16.27■□□□□ 0.2
USF1-211ENST00000534633 TLL2Q9Y6L7 1015 aa16.27■□□□□ 0.2
USF1-211ENST00000534633 POLR2AP24928 1970 aaKnown RBP16.27■□□□□ 0.19
USF1-211ENST00000534633 YDJCA8MPS7 323 aa16.26■□□□□ 0.19
USF1-211ENST00000534633 ATP5J2-PTCD1G3V325 749 aa16.26■□□□□ 0.19
USF1-211ENST00000534633 RAD17O75943 681 aa16.26■□□□□ 0.19
USF1-211ENST00000534633 LBX1P52954 281 aa16.26■□□□□ 0.19
USF1-211ENST00000534633 DIEXFQ68CQ4 756 aaKnown RBP16.26■□□□□ 0.19
USF1-211ENST00000534633 ZC3H15Q8WU90 426 aaKnown RBP16.26■□□□□ 0.19
USF1-211ENST00000534633 ZNF428Q96B54 188 aa16.26■□□□□ 0.19
USF1-211ENST00000534633 MRS2Q9HD23 443 aa16.26■□□□□ 0.19
USF1-211ENST00000534633 MBIPQ9NS73 344 aa16.26■□□□□ 0.19
USF1-211ENST00000534633 COL4A1P02462 1669 aa16.26■□□□□ 0.19
USF1-211ENST00000534633 ZNF853P0CG23 659 aa16.25■□□□□ 0.19
USF1-211ENST00000534633 HSPA8P11142 646 aaKnown RBP16.25■□□□□ 0.19
USF1-211ENST00000534633 PAXIP1Q6ZW49 1069 aaPredicted RBP16.25■□□□□ 0.19
USF1-211ENST00000534633 CELF1Q92879 486 aaKnown RBP16.25■□□□□ 0.19
USF1-211ENST00000534633 PSME4Q14997 1843 aa16.24■□□□□ 0.19
USF1-211ENST00000534633 H7C1D1 291 aa16.24■□□□□ 0.19
USF1-211ENST00000534633 IRS4O14654 1257 aaPredicted RBP16.24■□□□□ 0.19
USF1-211ENST00000534633 CALD1Q05682 793 aaKnown RBP16.24■□□□□ 0.19
USF1-211ENST00000534633 WASHC4Q2M389 1173 aa16.24■□□□□ 0.19
USF1-211ENST00000534633 CYP4F22Q6NT55 531 aa16.24■□□□□ 0.19
USF1-211ENST00000534633 GPR101Q96P66 508 aaPredicted RBP16.24■□□□□ 0.19
USF1-211ENST00000534633 GLIS2Q9BZE0 524 aaPredicted RBP16.24■□□□□ 0.19
USF1-211ENST00000534633 CNOT7Q9UIV1 285 aaKnown RBP16.24■□□□□ 0.19
USF1-211ENST00000534633 NSFL1CQ9UNZ2 370 aaKnown RBP16.24■□□□□ 0.19
USF1-211ENST00000534633 SCN9AQ15858 1988 aa16.24■□□□□ 0.19
USF1-211ENST00000534633 MYH3P11055 1940 aa16.23■□□□□ 0.19
USF1-211ENST00000534633 CELF2O95319 508 aaKnown RBP16.23■□□□□ 0.19
USF1-211ENST00000534633 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
USF1-211ENST00000534633 HIRAP54198 1017 aaPredicted RBP16.23■□□□□ 0.19
USF1-211ENST00000534633 GNAI1P63096 354 aa16.23■□□□□ 0.19
USF1-211ENST00000534633 GOLGA2Q08379 1002 aa16.23■□□□□ 0.19
USF1-211ENST00000534633 RIC3Q7Z5B4 369 aa16.23■□□□□ 0.19
USF1-211ENST00000534633 SAPCD2Q86UD0 394 aa16.23■□□□□ 0.19
USF1-211ENST00000534633 TRPM4Q8TD43 1214 aa16.23■□□□□ 0.19
USF1-211ENST00000534633 DPF2Q92785 391 aa16.23■□□□□ 0.19
USF1-211ENST00000534633 IFT57Q9NWB7 429 aa16.23■□□□□ 0.19
USF1-211ENST00000534633 MAP2K2P36507 400 aa16.22■□□□□ 0.19
USF1-211ENST00000534633 GRM1Q13255 1194 aa16.22■□□□□ 0.19
USF1-211ENST00000534633 RTL5Q5HYW3 569 aaPredicted RBP16.22■□□□□ 0.19
USF1-211ENST00000534633 CDC37L1Q7L3B6 337 aa16.22■□□□□ 0.19
USF1-211ENST00000534633 ZBTB38Q8NAP3 1195 aaPredicted RBP16.22■□□□□ 0.19
USF1-211ENST00000534633 HHIPL1Q96JK4 782 aa16.22■□□□□ 0.19
USF1-211ENST00000534633 EYA3Q99504 573 aa16.22■□□□□ 0.19
USF1-211ENST00000534633 BEGAINQ9BUH8 593 aa16.22■□□□□ 0.19
USF1-211ENST00000534633 C6orf229H3BNL8 230 aa16.21■□□□□ 0.19
USF1-211ENST00000534633 PSMD14O00487 310 aa16.21■□□□□ 0.19
USF1-211ENST00000534633 APAF1O14727 1248 aa16.21■□□□□ 0.19
USF1-211ENST00000534633 RPS8P62241 208 aaKnown RBP16.21■□□□□ 0.19
USF1-211ENST00000534633 GPSM2P81274 684 aa16.21■□□□□ 0.19
USF1-211ENST00000534633 MICALL2Q8IY33 904 aa16.21■□□□□ 0.19
USF1-211ENST00000534633 PHAXQ9H814 394 aaKnown RBP16.21■□□□□ 0.19
USF1-211ENST00000534633 DBNDD1Q9H9R9 158 aa16.21■□□□□ 0.19
USF1-211ENST00000534633 POLLQ9UGP5 575 aa16.21■□□□□ 0.19
USF1-211ENST00000534633 SHTN1A0MZ66 631 aa16.2■□□□□ 0.18
USF1-211ENST00000534633 RIMBP2O15034 1052 aa16.2■□□□□ 0.18
USF1-211ENST00000534633 RPS12P25398 132 aaKnown RBP16.2■□□□□ 0.18
USF1-211ENST00000534633 MIER1Q8N108 512 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms