RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 SH3BP5O60239 455 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 SPATA32Q96LK8 384 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 ESPNB1AK53 854 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 USP8P40818 1118 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 KSR2Q6VAB6 950 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 SPATA24Q86W54 205 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.17□□□□□ -0.78
CTNND1-237ENST00000534579 SLU7O95391 586 aaKnown RBP10.17□□□□□ -0.78
CTNND1-237ENST00000534579 CCDC102AQ96A19 550 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 NLRP3Q96P20 1036 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 BCCIPQ9P287 314 aaKnown RBP eCLIP10.17□□□□□ -0.781e-6■■■■□ 21.2
CTNND1-237ENST00000534579 GCOM1H8Y6P7 765 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-237ENST00000534579 MYZAPP0CAP1 466 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 TSHZ3Q63HK5 1081 aa10.17□□□□□ -0.78
CTNND1-237ENST00000534579 RNF41Q9H4P4 317 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-237ENST00000534579 CCDC66A2RUB6 948 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 GRM8O00222 908 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 KIF20AO95235 890 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 LDHCP07864 332 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 CCDC192P0DO97 292 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 SPTY2D1Q68D10 685 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-237ENST00000534579 CKAP2LQ8IYA6 745 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 GIMAP7Q8NHV1 300 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 CTCFLQ8NI51 663 aaPredicted RBP10.16□□□□□ -0.78
CTNND1-237ENST00000534579 ARHGAP45Q92619 1136 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 RTCBQ9Y3I0 505 aaKnown RBP10.16□□□□□ -0.78
CTNND1-237ENST00000534579 YEATS2Q9ULM3 1422 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 IFFO1Q0D2I5 559 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 UBE2Q2Q8WVN8 375 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 TFCP2L1Q9NZI6 479 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 SERPINA10Q9UK55 444 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 DNA2P51530 1060 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 SYCP3Q8IZU3 236 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 RAB34Q9BZG1 259 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 SYNCQ9H7C4 482 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 TMEM2Q9UHN6 1383 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 CCDC82Q8N4S0 544 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 DDX17Q92841 729 aaKnown RBP10.16□□□□□ -0.78
CTNND1-237ENST00000534579 PHACTR3Q96KR7 559 aa10.16□□□□□ -0.78
CTNND1-237ENST00000534579 RNMTO43148 476 aaKnown RBP10.15□□□□□ -0.78
CTNND1-237ENST00000534579 BAG3O95817 575 aa10.15□□□□□ -0.78
CTNND1-237ENST00000534579 HMGB1P09429 215 aaKnown RBP10.15□□□□□ -0.78
CTNND1-237ENST00000534579 LMBR1LQ6UX01 489 aa10.15□□□□□ -0.78
CTNND1-237ENST00000534579 MRPL50Q8N5N7 158 aaKnown RBP10.15□□□□□ -0.78
CTNND1-237ENST00000534579 SLC12A7Q9Y666 1083 aa10.15□□□□□ -0.78
CTNND1-237ENST00000534579 CCDC196A0A1B0GTZ2 297 aa10.15□□□□□ -0.78
CTNND1-237ENST00000534579 NDC80O14777 642 aa10.15□□□□□ -0.78
CTNND1-237ENST00000534579 ALDH1L1O75891 902 aa10.15□□□□□ -0.78
CTNND1-237ENST00000534579 BIRC2Q13490 618 aa10.15□□□□□ -0.78
CTNND1-237ENST00000534579 SLC4A8Q2Y0W8 1093 aa10.15□□□□□ -0.78
CTNND1-237ENST00000534579 CCDC117Q8IWD4 279 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-237ENST00000534579 RHPN1Q8TCX5 695 aa10.15□□□□□ -0.78
CTNND1-237ENST00000534579 EDC4Q6P2E9 1401 aaKnown RBP10.15□□□□□ -0.78
CTNND1-237ENST00000534579 COL17A1Q9UMD9 1497 aaPredicted RBP10.15□□□□□ -0.78
CTNND1-237ENST00000534579 IFIT3O14879 490 aaKnown RBP10.15□□□□□ -0.78
CTNND1-237ENST00000534579 PRC1O43663 620 aa10.15□□□□□ -0.79
CTNND1-237ENST00000534579 UQCRFS1P1P0C7P4 283 aa10.15□□□□□ -0.79
CTNND1-237ENST00000534579 CETN1Q12798 172 aa10.15□□□□□ -0.79
CTNND1-237ENST00000534579 TSPOAP1O95153 1857 aa10.15□□□□□ -0.79
CTNND1-237ENST00000534579 BEGAINQ9BUH8 593 aa10.15□□□□□ -0.79
CTNND1-237ENST00000534579 NLRP5P59047 1200 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 LUZP1Q86V48 1076 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 NYXQ9GZU5 481 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 SMTNL1A8MU46 457 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 FGFR1OPO95684 399 aaKnown RBP10.14□□□□□ -0.79
CTNND1-237ENST00000534579 KRT24Q2M2I5 525 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 ARHGAP29Q52LW3 1261 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 IQSEC3Q9UPP2 1182 aaPredicted RBP10.14□□□□□ -0.79
CTNND1-237ENST00000534579 ADGBQ8N7X0 1667 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 TMCO5BA8MYB1 307 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 FERMT3Q86UX7 667 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 HLA-DOAP06340 250 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 ATP2B3Q16720 1220 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 SLAIN2Q9P270 581 aa10.14□□□□□ -0.79
CTNND1-237ENST00000534579 PPP1R14CQ8TAE6 165 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 MMRN2Q9H8L6 949 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 MAGI3Q5TCQ9 1506 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 CHD1O14646 1710 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 SBNO1A3KN83 1393 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 HAND2P61296 217 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 PLS1Q14651 629 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 PIK3C2GO75747 1445 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 GOLGA8AA7E2F4 631 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 GOLGA8BA8MQT2 603 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 LTKP29376 864 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 TPTE2Q6XPS3 522 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 TSPYL6Q8N831 410 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 HDAC9Q9UKV0 1011 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 STXBP4Q6ZWJ1 553 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 ACTN2P35609 894 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 CATIPQ7Z7H3 387 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 SREK1Q8WXA9 508 aaKnown RBP10.13□□□□□ -0.79
CTNND1-237ENST00000534579 CDCA7Q9BWT1 371 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-237ENST00000534579 VAT1LQ9HCJ6 419 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 PARP3Q9Y6F1 533 aa10.13□□□□□ -0.79
CTNND1-237ENST00000534579 BMS1Q14692 1282 aaKnown RBP10.12□□□□□ -0.79
CTNND1-237ENST00000534579 CFAP57Q96MR6 1250 aa10.12□□□□□ -0.79
CTNND1-237ENST00000534579 SH2B1Q9NRF2 756 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-237ENST00000534579 TSPY2A6NKD2 308 aa10.12□□□□□ -0.79
CTNND1-237ENST00000534579 IGHDP01880 384 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms