RNA–Protein interactions for RNA: ENST00000534227.5

NCAPD3-211, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 4

Gene NCAPD3, Length 537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-211ENST00000534227 PPEF1O14829 653 aaPredicted RBP28.3■■■□□ 2.12
NCAPD3-211ENST00000534227 GRAPQ13588 217 aa28.3■■■□□ 2.12
NCAPD3-211ENST00000534227 BEND3Q5T5X7 828 aa28.3■■■□□ 2.12
NCAPD3-211ENST00000534227 GRAPLQ8TC17 118 aaPredicted RBP28.3■■■□□ 2.12
NCAPD3-211ENST00000534227 OLFM4Q6UX06 510 aa28.29■■■□□ 2.12
NCAPD3-211ENST00000534227 JARID2Q92833 1246 aaPredicted RBP28.29■■■□□ 2.12
NCAPD3-211ENST00000534227 LRRC37AA6NMS7 1700 aa28.29■■■□□ 2.12
NCAPD3-211ENST00000534227 FKBP4Q02790 459 aaKnown RBP eCLIP28.28■■■□□ 2.12
NCAPD3-211ENST00000534227 ATP6V0A2Q9Y487 856 aa28.28■■■□□ 2.12
NCAPD3-211ENST00000534227 BRPF1P55201 1214 aaPredicted RBP28.27■■■□□ 2.12
NCAPD3-211ENST00000534227 TMC4Q7Z404 712 aa28.27■■■□□ 2.12
NCAPD3-211ENST00000534227 SMC4Q9NTJ3 1288 aa28.27■■■□□ 2.12
NCAPD3-211ENST00000534227 UBE3BQ7Z3V4 1068 aa28.26■■■□□ 2.11
NCAPD3-211ENST00000534227 PSMD1Q99460 953 aa28.26■■■□□ 2.11
NCAPD3-211ENST00000534227 BCL2L13Q9BXK5 485 aa28.26■■■□□ 2.11
NCAPD3-211ENST00000534227 ALDH1L1O75891 902 aa28.25■■■□□ 2.11
NCAPD3-211ENST00000534227 CASP7P55210 303 aa28.25■■■□□ 2.11
NCAPD3-211ENST00000534227 CCDC152Q4G0S7 254 aa28.25■■■□□ 2.11
NCAPD3-211ENST00000534227 SP8Q8IXZ3 490 aa28.25■■■□□ 2.11
NCAPD3-211ENST00000534227 PLA2G12BQ9BX93 195 aa28.25■■■□□ 2.11
NCAPD3-211ENST00000534227 TMX4Q9H1E5 349 aaPredicted RBP28.25■■■□□ 2.11
NCAPD3-211ENST00000534227 COL4A1P02462 1669 aa28.23■■■□□ 2.11
NCAPD3-211ENST00000534227 RARSP54136 660 aaKnown RBP28.23■■■□□ 2.11
NCAPD3-211ENST00000534227 SRCIN1Q9C0H9 1055 aa28.23■■■□□ 2.11
NCAPD3-211ENST00000534227 CTSWP56202 376 aa28.22■■■□□ 2.11
NCAPD3-211ENST00000534227 SLC4A10Q6U841 1118 aa28.22■■■□□ 2.11
NCAPD3-211ENST00000534227 CELF1Q92879 486 aaKnown RBP28.22■■■□□ 2.11
NCAPD3-211ENST00000534227 TTLL11Q8NHH1 800 aa28.21■■■□□ 2.11
NCAPD3-211ENST00000534227 RTL9Q8NET4 1388 aa28.21■■■□□ 2.11
NCAPD3-211ENST00000534227 SPEF2Q9C093 1822 aa28.2■■■□□ 2.11
NCAPD3-211ENST00000534227 RPS8P62241 208 aaKnown RBP28.2■■■□□ 2.1
NCAPD3-211ENST00000534227 GPBP1L1Q9HC44 474 aaPredicted RBP28.2■■■□□ 2.1
NCAPD3-211ENST00000534227 SLC51AQ86UW1 340 aa28.19■■■□□ 2.1
NCAPD3-211ENST00000534227 SEC31BQ9NQW1 1179 aa28.19■■■□□ 2.1
NCAPD3-211ENST00000534227 ZNF277Q9NRM2 450 aaPredicted RBP28.19■■■□□ 2.1
NCAPD3-211ENST00000534227 GRM8O00222 908 aa28.18■■■□□ 2.1
NCAPD3-211ENST00000534227 LTBP1Q14766 1721 aa28.18■■■□□ 2.1
NCAPD3-211ENST00000534227 IARSP41252 1262 aaKnown RBP28.17■■■□□ 2.1
NCAPD3-211ENST00000534227 ZNF526Q8TF50 670 aaPredicted RBP28.17■■■□□ 2.1
NCAPD3-211ENST00000534227 RTFDC1Q9BY42 306 aaPredicted RBP28.17■■■□□ 2.1
NCAPD3-211ENST00000534227 CSF1RP07333 972 aa28.16■■■□□ 2.1
NCAPD3-211ENST00000534227 MPNDQ8N594 471 aa28.16■■■□□ 2.1
NCAPD3-211ENST00000534227 CCDC85AQ96PX6 553 aaPredicted RBP28.16■■■□□ 2.1
NCAPD3-211ENST00000534227 VPS33BQ9H267 617 aa28.16■■■□□ 2.1
NCAPD3-211ENST00000534227 C9orf78Q9NZ63 289 aaPredicted RBP28.16■■■□□ 2.1
NCAPD3-211ENST00000534227 NOB1Q9ULX3 412 aaKnown RBP28.16■■■□□ 2.1
NCAPD3-211ENST00000534227 KDM2BQ8NHM5 1336 aa28.16■■■□□ 2.1
NCAPD3-211ENST00000534227 SUPT20HQ8NEM7 779 aa28.15■■■□□ 2.1
NCAPD3-211ENST00000534227 KIF16BQ96L93 1317 aa28.15■■■□□ 2.1
NCAPD3-211ENST00000534227 DPP8Q6V1X1 898 aaPredicted RBP28.14■■■□□ 2.1
NCAPD3-211ENST00000534227 ARHGAP45Q92619 1136 aa28.14■■■□□ 2.1
NCAPD3-211ENST00000534227 CDC5LQ99459 802 aaKnown RBP28.14■■■□□ 2.1
NCAPD3-211ENST00000534227 API5Q9BZZ5 524 aaKnown RBP28.14■■■□□ 2.1
NCAPD3-211ENST00000534227 GREM2Q9H772 168 aa28.14■■■□□ 2.1
NCAPD3-211ENST00000534227 DUOX1Q9NRD9 1551 aa28.14■■■□□ 2.1
NCAPD3-211ENST00000534227 UTYO14607 1347 aa28.14■■■□□ 2.09
NCAPD3-211ENST00000534227 GLTPD2A6NH11 291 aa28.13■■■□□ 2.09
NCAPD3-211ENST00000534227 ANKRD18AQ8IVF6 992 aa28.13■■■□□ 2.09
NCAPD3-211ENST00000534227 WDR90Q96KV7 1748 aa28.12■■■□□ 2.09
NCAPD3-211ENST00000534227 FOXO4P98177 505 aa28.11■■■□□ 2.09
NCAPD3-211ENST00000534227 DPY19L2Q6NUT2 758 aa28.11■■■□□ 2.09
NCAPD3-211ENST00000534227 COL4A5P29400 1685 aa28.1■■■□□ 2.09
NCAPD3-211ENST00000534227 CCT4P50991 539 aaKnown RBP28.09■■■□□ 2.09
NCAPD3-211ENST00000534227 JDP2Q8WYK2 163 aa28.09■■■□□ 2.09
NCAPD3-211ENST00000534227 FZD9O00144 591 aa28.08■■■□□ 2.09
NCAPD3-211ENST00000534227 NBPF7P0C2Y1 421 aaPredicted RBP28.08■■■□□ 2.09
NCAPD3-211ENST00000534227 FAM161AQ3B820 660 aa28.08■■■□□ 2.09
NCAPD3-211ENST00000534227 LARGE2Q8N3Y3 721 aa28.08■■■□□ 2.09
NCAPD3-211ENST00000534227 BSDC1Q9NW68 430 aaPredicted RBP28.08■■■□□ 2.09
NCAPD3-211ENST00000534227 PODXL2Q9NZ53 605 aa28.08■■■□□ 2.09
NCAPD3-211ENST00000534227 NSFL1CQ9UNZ2 370 aaKnown RBP28.08■■■□□ 2.09
NCAPD3-211ENST00000534227 KIF3CO14782 793 aa28.07■■■□□ 2.08
NCAPD3-211ENST00000534227 IPO8O15397 1037 aaKnown RBP28.07■■■□□ 2.08
NCAPD3-211ENST00000534227 PPIP5K2O43314 1243 aa28.07■■■□□ 2.08
NCAPD3-211ENST00000534227 BCAR3O75815 825 aa28.07■■■□□ 2.08
NCAPD3-211ENST00000534227 ITGA6P23229 1130 aa28.07■■■□□ 2.08
NCAPD3-211ENST00000534227 GPSM2P81274 684 aa28.07■■■□□ 2.08
NCAPD3-211ENST00000534227 EPHA10Q5JZY3 1008 aa28.07■■■□□ 2.08
NCAPD3-211ENST00000534227 NMRK2Q9NPI5 230 aa28.07■■■□□ 2.08
NCAPD3-211ENST00000534227 SCN4AP35499 1836 aa28.06■■■□□ 2.08
NCAPD3-211ENST00000534227 USP44Q9H0E7 712 aa28.06■■■□□ 2.08
NCAPD3-211ENST00000534227 A0A1B0GUL6 1792 aa28.05■■■□□ 2.08
NCAPD3-211ENST00000534227 ANKRD18BA2A2Z9 1011 aa28.05■■■□□ 2.08
NCAPD3-211ENST00000534227 IGHMBP2P38935 993 aaKnown RBP28.05■■■□□ 2.08
NCAPD3-211ENST00000534227 KIAA2012Q0VF49 1180 aa28.05■■■□□ 2.08
NCAPD3-211ENST00000534227 LMBR1LQ6UX01 489 aa28.05■■■□□ 2.08
NCAPD3-211ENST00000534227 KAZALD1Q96I82 304 aa28.05■■■□□ 2.08
NCAPD3-211ENST00000534227 SUCLG2Q96I99 432 aa28.05■■■□□ 2.08
NCAPD3-211ENST00000534227 C1QTNF8P60827 252 aa28.04■■■□□ 2.08
NCAPD3-211ENST00000534227 AOC3Q16853 763 aa28.04■■■□□ 2.08
NCAPD3-211ENST00000534227 IFIT5Q13325 482 aaKnown RBP28.03■■■□□ 2.08
NCAPD3-211ENST00000534227 NIM1KQ8IY84 436 aa28.03■■■□□ 2.08
NCAPD3-211ENST00000534227 TBC1D16Q8TBP0 767 aa28.03■■■□□ 2.08
NCAPD3-211ENST00000534227 POLLQ9UGP5 575 aa28.03■■■□□ 2.08
NCAPD3-211ENST00000534227 XDHP47989 1333 aa28.02■■■□□ 2.08
NCAPD3-211ENST00000534227 ZNF541Q9H0D2 1346 aa28.02■■■□□ 2.08
NCAPD3-211ENST00000534227 ATF7IPQ6VMQ6 1270 aa28.02■■■□□ 2.08
NCAPD3-211ENST00000534227 EYA3Q99504 573 aa28.02■■■□□ 2.08
NCAPD3-211ENST00000534227 RRAGCQ9HB90 399 aa28.02■■■□□ 2.08
NCAPD3-211ENST00000534227 ANKIB1Q9P2G1 1089 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms