RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 DPP8Q6V1X1 898 aaPredicted RBP22.54■■□□□ 1.2
VPS51-213ENST00000533827 NIM1KQ8IY84 436 aa22.54■■□□□ 1.2
VPS51-213ENST00000533827 MPNDQ8N594 471 aa22.54■■□□□ 1.2
VPS51-213ENST00000533827 CREBZFQ9NS37 354 aa22.54■■□□□ 1.2
VPS51-213ENST00000533827 PCNTO95613 3336 aa22.54■■□□□ 1.2
VPS51-213ENST00000533827 LRRC37AA6NMS7 1700 aa22.54■■□□□ 1.2
VPS51-213ENST00000533827 ITGBL1O95965 494 aaPredicted RBP22.53■■□□□ 1.2
VPS51-213ENST00000533827 TMC4Q7Z404 712 aa22.53■■□□□ 1.2
VPS51-213ENST00000533827 SCNN1DP51172 638 aa22.52■■□□□ 1.2
VPS51-213ENST00000533827 TSPYL6Q8N831 410 aa22.52■■□□□ 1.2
VPS51-213ENST00000533827 CLEC11AQ9Y240 323 aa22.52■■□□□ 1.2
VPS51-213ENST00000533827 ZNF316A6NFI3 1004 aaPredicted RBP22.51■■□□□ 1.19
VPS51-213ENST00000533827 IRS4O14654 1257 aaPredicted RBP22.51■■□□□ 1.19
VPS51-213ENST00000533827 RTL5Q5HYW3 569 aaPredicted RBP22.51■■□□□ 1.19
VPS51-213ENST00000533827 CCDC30Q5VVM6 783 aa22.51■■□□□ 1.19
VPS51-213ENST00000533827 WWC1Q8IX03 1113 aa22.51■■□□□ 1.19
VPS51-213ENST00000533827 CHMP4AQ9BY43 222 aa22.51■■□□□ 1.19
VPS51-213ENST00000533827 DUOX1Q9NRD9 1551 aa22.5■■□□□ 1.19
VPS51-213ENST00000533827 COL4A1P02462 1669 aa22.5■■□□□ 1.19
VPS51-213ENST00000533827 KIAA2012Q0VF49 1180 aa22.5■■□□□ 1.19
VPS51-213ENST00000533827 NCBP3Q53F19 620 aaKnown RBP22.5■■□□□ 1.19
VPS51-213ENST00000533827 ZBTB38Q8NAP3 1195 aaPredicted RBP22.5■■□□□ 1.19
VPS51-213ENST00000533827 CELF1Q92879 486 aaKnown RBP22.5■■□□□ 1.19
VPS51-213ENST00000533827 TSR2Q969E8 191 aaKnown RBP22.5■■□□□ 1.19
VPS51-213ENST00000533827 MYD88Q99836 296 aa22.5■■□□□ 1.19
VPS51-213ENST00000533827 ZNRF3Q9ULT6 936 aa22.5■■□□□ 1.19
VPS51-213ENST00000533827 LMOD1P29536 600 aaPredicted RBP22.49■■□□□ 1.19
VPS51-213ENST00000533827 EPS15P42566 896 aa22.49■■□□□ 1.19
VPS51-213ENST00000533827 CXCL9Q07325 125 aa22.48■■□□□ 1.19
VPS51-213ENST00000533827 CNTROBQ8N137 903 aa22.48■■□□□ 1.19
VPS51-213ENST00000533827 CCDC191Q8NCU4 936 aa22.48■■□□□ 1.19
VPS51-213ENST00000533827 MRS2Q9HD23 443 aa22.48■■□□□ 1.19
VPS51-213ENST00000533827 ANP32CO43423 234 aa22.47■■□□□ 1.19
VPS51-213ENST00000533827 DDX58O95786 925 aaKnown RBP22.47■■□□□ 1.19
VPS51-213ENST00000533827 MAP1SQ66K74 1059 aaPredicted RBP22.47■■□□□ 1.19
VPS51-213ENST00000533827 METTL22Q9BUU2 404 aaPredicted RBP22.47■■□□□ 1.19
VPS51-213ENST00000533827 MKRN1Q9UHC7 482 aaKnown RBP22.46■■□□□ 1.19
VPS51-213ENST00000533827 IL16Q14005 1332 aa22.46■■□□□ 1.19
VPS51-213ENST00000533827 TMEM88BA6NKF7 163 aa22.45■■□□□ 1.18
VPS51-213ENST00000533827 PCCAP05165 728 aaPredicted RBP22.45■■□□□ 1.18
VPS51-213ENST00000533827 USP50Q70EL3 339 aaPredicted RBP22.45■■□□□ 1.18
VPS51-213ENST00000533827 GPRC5DQ9NZD1 345 aa22.45■■□□□ 1.18
VPS51-213ENST00000533827 HSP90B1P14625 803 aaKnown RBP22.44■■□□□ 1.18
VPS51-213ENST00000533827 CNTNAP1P78357 1384 aa22.44■■□□□ 1.18
VPS51-213ENST00000533827 TWISTNBQ3B726 338 aaPredicted RBP22.44■■□□□ 1.18
VPS51-213ENST00000533827 CWC25Q9NXE8 425 aaPredicted RBP22.44■■□□□ 1.18
VPS51-213ENST00000533827 NSFL1CQ9UNZ2 370 aaKnown RBP22.44■■□□□ 1.18
VPS51-213ENST00000533827 MAP3K2Q9Y2U5 619 aa22.44■■□□□ 1.18
VPS51-213ENST00000533827 YDJCA8MPS7 323 aa22.43■■□□□ 1.18
VPS51-213ENST00000533827 RPS8P62241 208 aaKnown RBP22.43■■□□□ 1.18
VPS51-213ENST00000533827 CIAPIN1Q6FI81 312 aa22.43■■□□□ 1.18
VPS51-213ENST00000533827 KSR2Q6VAB6 950 aa22.43■■□□□ 1.18
VPS51-213ENST00000533827 PI4KAP2A4QPH2 592 aa22.42■■□□□ 1.18
VPS51-213ENST00000533827 PDE8AO60658 829 aa22.42■■□□□ 1.18
VPS51-213ENST00000533827 GPSM2P81274 684 aa22.42■■□□□ 1.18
VPS51-213ENST00000533827 WASHC4Q2M389 1173 aa22.42■■□□□ 1.18
VPS51-213ENST00000533827 PI4KAP1Q8N8J0 262 aa22.42■■□□□ 1.18
VPS51-213ENST00000533827 STK31Q9BXU1 1019 aa22.42■■□□□ 1.18
VPS51-213ENST00000533827 SEC31BQ9NQW1 1179 aa22.42■■□□□ 1.18
VPS51-213ENST00000533827 ADARB2Q9NS39 739 aaKnown RBP22.42■■□□□ 1.18
VPS51-213ENST00000533827 POLLQ9UGP5 575 aa22.42■■□□□ 1.18
VPS51-213ENST00000533827 RAD17O75943 681 aa22.41■■□□□ 1.18
VPS51-213ENST00000533827 IGKV5-2P06315 115 aa22.41■■□□□ 1.18
VPS51-213ENST00000533827 HSPA1AP0DMV8 641 aaKnown RBP22.41■■□□□ 1.18
VPS51-213ENST00000533827 HSPA1BP0DMV9 641 aaKnown RBP22.41■■□□□ 1.18
VPS51-213ENST00000533827 GMPSP49915 693 aaPredicted RBP22.41■■□□□ 1.18
VPS51-213ENST00000533827 TNIP1Q15025 636 aa22.41■■□□□ 1.18
VPS51-213ENST00000533827 JARID2Q92833 1246 aaPredicted RBP22.41■■□□□ 1.18
VPS51-213ENST00000533827 CDHR2Q9BYE9 1310 aa22.4■■□□□ 1.18
VPS51-213ENST00000533827 SLC4A2P04920 1241 aa22.39■■□□□ 1.17
VPS51-213ENST00000533827 CCDC152Q4G0S7 254 aa22.39■■□□□ 1.17
VPS51-213ENST00000533827 G2E3Q7L622 706 aa22.39■■□□□ 1.17
VPS51-213ENST00000533827 TBC1D16Q8TBP0 767 aa22.39■■□□□ 1.17
VPS51-213ENST00000533827 FANCIQ9NVI1 1328 aa22.38■■□□□ 1.17
VPS51-213ENST00000533827 C6orf229H3BNL8 230 aa22.38■■□□□ 1.17
VPS51-213ENST00000533827 RIMBP2O15034 1052 aa22.38■■□□□ 1.17
VPS51-213ENST00000533827 COL13A1Q5TAT6 717 aaPredicted RBP22.38■■□□□ 1.17
VPS51-213ENST00000533827 WDR63Q8IWG1 891 aa22.38■■□□□ 1.17
VPS51-213ENST00000533827 PODXL2Q9NZ53 605 aa22.38■■□□□ 1.17
VPS51-213ENST00000533827 EYA3Q99504 573 aa22.37■■□□□ 1.17
VPS51-213ENST00000533827 BCL2L13Q9BXK5 485 aa22.37■■□□□ 1.17
VPS51-213ENST00000533827 DBNDD1Q9H9R9 158 aa22.37■■□□□ 1.17
VPS51-213ENST00000533827 SALL2Q9Y467 1007 aaPredicted RBP22.37■■□□□ 1.17
VPS51-213ENST00000533827 RASSF10A6NK89 507 aa22.36■■□□□ 1.17
VPS51-213ENST00000533827 VEGFBP49765 207 aa22.36■■□□□ 1.17
VPS51-213ENST00000533827 FMR1Q06787 632 aaKnown RBP eCLIP22.36■■□□□ 1.172e-8■□□□□ 10.4
VPS51-213ENST00000533827 NEXNQ0ZGT2 675 aa22.36■■□□□ 1.17
VPS51-213ENST00000533827 CCDC85AQ96PX6 553 aaPredicted RBP22.36■■□□□ 1.17
VPS51-213ENST00000533827 PGAP2Q9UHJ9 254 aa22.36■■□□□ 1.17
VPS51-213ENST00000533827 NEURL1BA8MQ27 555 aa22.35■■□□□ 1.17
VPS51-213ENST00000533827 CWF19L2Q2TBE0 894 aaKnown RBP22.35■■□□□ 1.17
VPS51-213ENST00000533827 GPR101Q96P66 508 aaPredicted RBP22.35■■□□□ 1.17
VPS51-213ENST00000533827 CNOT7Q9UIV1 285 aaKnown RBP22.35■■□□□ 1.17
VPS51-213ENST00000533827 PSMD14O00487 310 aa22.34■■□□□ 1.17
VPS51-213ENST00000533827 ECE2O60344 883 aa22.34■■□□□ 1.17
VPS51-213ENST00000533827 VAMP4O75379 141 aa22.34■■□□□ 1.17
VPS51-213ENST00000533827 HIRAP54198 1017 aaPredicted RBP22.34■■□□□ 1.17
VPS51-213ENST00000533827 CTSWP56202 376 aa22.34■■□□□ 1.17
VPS51-213ENST00000533827 DEFB115Q30KQ5 88 aa22.34■■□□□ 1.17
VPS51-213ENST00000533827 DPF2Q92785 391 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms