RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 PHAXQ9H814 394 aaKnown RBP23.83■■□□□ 1.41
HIF3A-216ENST00000533789 PASKQ96RG2 1323 aa23.83■■□□□ 1.4
HIF3A-216ENST00000533789 PSME4Q14997 1843 aa23.82■■□□□ 1.4
HIF3A-216ENST00000533789 AOC3Q16853 763 aa23.82■■□□□ 1.4
HIF3A-216ENST00000533789 CCDC27Q2M243 656 aa23.82■■□□□ 1.4
HIF3A-216ENST00000533789 TMC4Q7Z404 712 aa23.82■■□□□ 1.4
HIF3A-216ENST00000533789 RIC3Q7Z5B4 369 aa23.82■■□□□ 1.4
HIF3A-216ENST00000533789 PNMA8AQ86V59 439 aaPredicted RBP23.82■■□□□ 1.4
HIF3A-216ENST00000533789 CHMP4AQ9BY43 222 aa23.82■■□□□ 1.4
HIF3A-216ENST00000533789 GJA3Q9Y6H8 435 aa23.82■■□□□ 1.4
HIF3A-216ENST00000533789 DPP8Q6V1X1 898 aaPredicted RBP23.81■■□□□ 1.4
HIF3A-216ENST00000533789 CREBZFQ9NS37 354 aa23.81■■□□□ 1.4
HIF3A-216ENST00000533789 SF3B3Q15393 1217 aaKnown RBP23.8■■□□□ 1.4
HIF3A-216ENST00000533789 CCDC30Q5VVM6 783 aa23.8■■□□□ 1.4
HIF3A-216ENST00000533789 MPNDQ8N594 471 aa23.8■■□□□ 1.4
HIF3A-216ENST00000533789 ZNF316A6NFI3 1004 aaPredicted RBP23.79■■□□□ 1.4
HIF3A-216ENST00000533789 LMOD1P29536 600 aaPredicted RBP23.79■■□□□ 1.4
HIF3A-216ENST00000533789 SCNN1DP51172 638 aa23.78■■□□□ 1.4
HIF3A-216ENST00000533789 WWC1Q8IX03 1113 aa23.78■■□□□ 1.4
HIF3A-216ENST00000533789 TSPYL6Q8N831 410 aa23.78■■□□□ 1.4
HIF3A-216ENST00000533789 TSR2Q969E8 191 aaKnown RBP23.78■■□□□ 1.4
HIF3A-216ENST00000533789 MRS2Q9HD23 443 aa23.78■■□□□ 1.4
HIF3A-216ENST00000533789 CLEC11AQ9Y240 323 aa23.78■■□□□ 1.4
HIF3A-216ENST00000533789 SCN9AQ15858 1988 aa23.78■■□□□ 1.4
HIF3A-216ENST00000533789 IRS4O14654 1257 aaPredicted RBP23.77■■□□□ 1.4
HIF3A-216ENST00000533789 ANP32CO43423 234 aa23.77■■□□□ 1.4
HIF3A-216ENST00000533789 KIAA2012Q0VF49 1180 aa23.77■■□□□ 1.4
HIF3A-216ENST00000533789 RTL5Q5HYW3 569 aaPredicted RBP23.77■■□□□ 1.4
HIF3A-216ENST00000533789 MYD88Q99836 296 aa23.77■■□□□ 1.4
HIF3A-216ENST00000533789 DDX58O95786 925 aaKnown RBP23.76■■□□□ 1.39
HIF3A-216ENST00000533789 ITGBL1O95965 494 aaPredicted RBP23.76■■□□□ 1.39
HIF3A-216ENST00000533789 NCBP3Q53F19 620 aaKnown RBP23.76■■□□□ 1.39
HIF3A-216ENST00000533789 IFFO2Q5TF58 517 aa23.76■■□□□ 1.39
HIF3A-216ENST00000533789 ZBTB38Q8NAP3 1195 aaPredicted RBP23.76■■□□□ 1.39
HIF3A-216ENST00000533789 ZNRF3Q9ULT6 936 aa23.76■■□□□ 1.39
HIF3A-216ENST00000533789 POLR2AP24928 1970 aaKnown RBP23.76■■□□□ 1.39
HIF3A-216ENST00000533789 CCDC191Q8NCU4 936 aa23.75■■□□□ 1.39
HIF3A-216ENST00000533789 CELF1Q92879 486 aaKnown RBP23.75■■□□□ 1.39
HIF3A-216ENST00000533789 IL16Q14005 1332 aa23.75■■□□□ 1.39
HIF3A-216ENST00000533789 HSP90B1P14625 803 aaKnown RBP23.74■■□□□ 1.39
HIF3A-216ENST00000533789 METTL22Q9BUU2 404 aaPredicted RBP23.74■■□□□ 1.39
HIF3A-216ENST00000533789 PCCAP05165 728 aaPredicted RBP23.73■■□□□ 1.39
HIF3A-216ENST00000533789 EPS15P42566 896 aa23.73■■□□□ 1.39
HIF3A-216ENST00000533789 CXCL9Q07325 125 aa23.73■■□□□ 1.39
HIF3A-216ENST00000533789 MAP1SQ66K74 1059 aaPredicted RBP23.73■■□□□ 1.39
HIF3A-216ENST00000533789 CNTROBQ8N137 903 aa23.72■■□□□ 1.39
HIF3A-216ENST00000533789 STK31Q9BXU1 1019 aa23.72■■□□□ 1.39
HIF3A-216ENST00000533789 CWC25Q9NXE8 425 aaPredicted RBP23.72■■□□□ 1.39
HIF3A-216ENST00000533789 CNTNAP1P78357 1384 aa23.72■■□□□ 1.39
HIF3A-216ENST00000533789 CDHR2Q9BYE9 1310 aa23.71■■□□□ 1.39
HIF3A-216ENST00000533789 TMEM88BA6NKF7 163 aa23.71■■□□□ 1.39
HIF3A-216ENST00000533789 TWISTNBQ3B726 338 aaPredicted RBP23.71■■□□□ 1.39
HIF3A-216ENST00000533789 USP50Q70EL3 339 aaPredicted RBP23.71■■□□□ 1.39
HIF3A-216ENST00000533789 GPRC5DQ9NZD1 345 aa23.71■■□□□ 1.39
HIF3A-216ENST00000533789 MKRN1Q9UHC7 482 aaKnown RBP23.71■■□□□ 1.39
HIF3A-216ENST00000533789 MAP3K2Q9Y2U5 619 aa23.71■■□□□ 1.39
HIF3A-216ENST00000533789 CIAPIN1Q6FI81 312 aa23.7■■□□□ 1.38
HIF3A-216ENST00000533789 KSR2Q6VAB6 950 aa23.7■■□□□ 1.38
HIF3A-216ENST00000533789 THSD7BQ9C0I4 1608 aa23.7■■□□□ 1.38
HIF3A-216ENST00000533789 NSFL1CQ9UNZ2 370 aaKnown RBP23.69■■□□□ 1.38
HIF3A-216ENST00000533789 A0A1B0GUL6 1792 aa23.68■■□□□ 1.38
HIF3A-216ENST00000533789 FANCIQ9NVI1 1328 aa23.68■■□□□ 1.38
HIF3A-216ENST00000533789 PI4KAP2A4QPH2 592 aa23.68■■□□□ 1.38
HIF3A-216ENST00000533789 PDE8AO60658 829 aa23.68■■□□□ 1.38
HIF3A-216ENST00000533789 RPS8P62241 208 aaKnown RBP23.68■■□□□ 1.38
HIF3A-216ENST00000533789 PI4KAP1Q8N8J0 262 aa23.68■■□□□ 1.38
HIF3A-216ENST00000533789 ADARB2Q9NS39 739 aaKnown RBP23.68■■□□□ 1.38
HIF3A-216ENST00000533789 ZNF646O15015 1829 aaPredicted RBP23.68■■□□□ 1.38
HIF3A-216ENST00000533789 YDJCA8MPS7 323 aa23.67■■□□□ 1.38
HIF3A-216ENST00000533789 RAD17O75943 681 aa23.67■■□□□ 1.38
HIF3A-216ENST00000533789 HSPA1AP0DMV8 641 aaKnown RBP23.67■■□□□ 1.38
HIF3A-216ENST00000533789 HSPA1BP0DMV9 641 aaKnown RBP23.67■■□□□ 1.38
HIF3A-216ENST00000533789 GMPSP49915 693 aaPredicted RBP23.67■■□□□ 1.38
HIF3A-216ENST00000533789 GPSM2P81274 684 aa23.67■■□□□ 1.38
HIF3A-216ENST00000533789 TNIP1Q15025 636 aa23.67■■□□□ 1.38
HIF3A-216ENST00000533789 WASHC4Q2M389 1173 aa23.67■■□□□ 1.38
HIF3A-216ENST00000533789 CCDC152Q4G0S7 254 aa23.67■■□□□ 1.38
HIF3A-216ENST00000533789 SEC31BQ9NQW1 1179 aa23.67■■□□□ 1.38
HIF3A-216ENST00000533789 IGKV5-2P06315 115 aa23.66■■□□□ 1.38
HIF3A-216ENST00000533789 POLLQ9UGP5 575 aa23.66■■□□□ 1.38
HIF3A-216ENST00000533789 NEXNQ0ZGT2 675 aa23.65■■□□□ 1.38
HIF3A-216ENST00000533789 EYA3Q99504 573 aa23.65■■□□□ 1.38
HIF3A-216ENST00000533789 C6orf229H3BNL8 230 aa23.64■■□□□ 1.37
HIF3A-216ENST00000533789 WDR63Q8IWG1 891 aa23.64■■□□□ 1.37
HIF3A-216ENST00000533789 JARID2Q92833 1246 aaPredicted RBP23.64■■□□□ 1.37
HIF3A-216ENST00000533789 BCL2L13Q9BXK5 485 aa23.64■■□□□ 1.37
HIF3A-216ENST00000533789 PODXL2Q9NZ53 605 aa23.64■■□□□ 1.37
HIF3A-216ENST00000533789 SLC4A2P04920 1241 aa23.63■■□□□ 1.37
HIF3A-216ENST00000533789 G2E3Q7L622 706 aa23.63■■□□□ 1.37
HIF3A-216ENST00000533789 TBC1D16Q8TBP0 767 aa23.63■■□□□ 1.37
HIF3A-216ENST00000533789 DBNDD1Q9H9R9 158 aa23.63■■□□□ 1.37
HIF3A-216ENST00000533789 RASSF10A6NK89 507 aa23.62■■□□□ 1.37
HIF3A-216ENST00000533789 RIMBP2O15034 1052 aa23.62■■□□□ 1.37
HIF3A-216ENST00000533789 NEURL1BA8MQ27 555 aa23.61■■□□□ 1.37
HIF3A-216ENST00000533789 ECE2O60344 883 aa23.61■■□□□ 1.37
HIF3A-216ENST00000533789 CTSWP56202 376 aa23.61■■□□□ 1.37
HIF3A-216ENST00000533789 FLIIQ13045 1269 aa23.61■■□□□ 1.37
HIF3A-216ENST00000533789 CWF19L2Q2TBE0 894 aaKnown RBP23.61■■□□□ 1.37
HIF3A-216ENST00000533789 CCDC85AQ96PX6 553 aaPredicted RBP23.61■■□□□ 1.37
HIF3A-216ENST00000533789 SALL2Q9Y467 1007 aaPredicted RBP23.61■■□□□ 1.37
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