RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 IRS4O14654 1257 aaPredicted RBP30.17■■■□□ 2.42
SMPD1-209ENST00000533196 MPNDQ8N594 471 aa30.17■■■□□ 2.42
SMPD1-209ENST00000533196 MYD88Q99836 296 aa30.17■■■□□ 2.42
SMPD1-209ENST00000533196 METTL22Q9BUU2 404 aaPredicted RBP30.17■■■□□ 2.42
SMPD1-209ENST00000533196 COL4A5P29400 1685 aa30.17■■■□□ 2.42
SMPD1-209ENST00000533196 PPIP5K2O43314 1243 aa30.16■■■□□ 2.42
SMPD1-209ENST00000533196 DPP8Q6V1X1 898 aaPredicted RBP30.16■■■□□ 2.42
SMPD1-209ENST00000533196 NIM1KQ8IY84 436 aa30.16■■■□□ 2.42
SMPD1-209ENST00000533196 LRRC37AA6NMS7 1700 aa30.16■■■□□ 2.42
SMPD1-209ENST00000533196 LDHDQ86WU2 507 aa30.15■■■□□ 2.42
SMPD1-209ENST00000533196 KSR2Q6VAB6 950 aa30.14■■■□□ 2.42
SMPD1-209ENST00000533196 CWC25Q9NXE8 425 aaPredicted RBP30.14■■■□□ 2.42
SMPD1-209ENST00000533196 PCCAP05165 728 aaPredicted RBP30.13■■■□□ 2.41
SMPD1-209ENST00000533196 SLC51AQ86UW1 340 aa30.13■■■□□ 2.41
SMPD1-209ENST00000533196 PNMA8AQ86V59 439 aaPredicted RBP30.13■■■□□ 2.41
SMPD1-209ENST00000533196 ZNF428Q96B54 188 aa30.13■■■□□ 2.41
SMPD1-209ENST00000533196 KLRG1Q96E93 195 aa30.13■■■□□ 2.41
SMPD1-209ENST00000533196 MAP3K2Q9Y2U5 619 aa30.12■■■□□ 2.41
SMPD1-209ENST00000533196 FANCIQ9NVI1 1328 aa30.12■■■□□ 2.41
SMPD1-209ENST00000533196 EPHX2P34913 555 aa30.11■■■□□ 2.41
SMPD1-209ENST00000533196 AOC3Q16853 763 aa30.11■■■□□ 2.41
SMPD1-209ENST00000533196 RTL5Q5HYW3 569 aaPredicted RBP30.11■■■□□ 2.41
SMPD1-209ENST00000533196 POTEIP0CG38 1075 aa30.1■■■□□ 2.41
SMPD1-209ENST00000533196 POTEJP0CG39 1038 aa30.1■■■□□ 2.41
SMPD1-209ENST00000533196 KIAA2012Q0VF49 1180 aa30.1■■■□□ 2.41
SMPD1-209ENST00000533196 PI4KAP2A4QPH2 592 aa30.09■■■□□ 2.41
SMPD1-209ENST00000533196 HTRA3P83110 453 aa30.09■■■□□ 2.41
SMPD1-209ENST00000533196 NEXNQ0ZGT2 675 aa30.09■■■□□ 2.41
SMPD1-209ENST00000533196 ADAMTSL1Q8N6G6 1762 aa30.09■■■□□ 2.41
SMPD1-209ENST00000533196 PI4KAP1Q8N8J0 262 aa30.09■■■□□ 2.41
SMPD1-209ENST00000533196 CELF1Q92879 486 aaKnown RBP30.09■■■□□ 2.41
SMPD1-209ENST00000533196 ZNRF3Q9ULT6 936 aa30.09■■■□□ 2.41
SMPD1-209ENST00000533196 GJA3Q9Y6H8 435 aa30.09■■■□□ 2.41
SMPD1-209ENST00000533196 SLC4A2P04920 1241 aa30.08■■■□□ 2.41
SMPD1-209ENST00000533196 LMOD1P29536 600 aaPredicted RBP30.08■■■□□ 2.41
SMPD1-209ENST00000533196 FAM9BQ8IZU0 186 aa30.08■■■□□ 2.41
SMPD1-209ENST00000533196 CDHR2Q9BYE9 1310 aa30.07■■■□□ 2.4
SMPD1-209ENST00000533196 PDE8AO60658 829 aa30.07■■■□□ 2.4
SMPD1-209ENST00000533196 SALL2Q9Y467 1007 aaPredicted RBP30.07■■■□□ 2.4
SMPD1-209ENST00000533196 RPS8P62241 208 aaKnown RBP30.06■■■□□ 2.4
SMPD1-209ENST00000533196 CCDC152Q4G0S7 254 aa30.06■■■□□ 2.4
SMPD1-209ENST00000533196 EAPPQ56P03 285 aaPredicted RBP30.06■■■□□ 2.4
SMPD1-209ENST00000533196 JMYQ8N9B5 988 aa30.05■■■□□ 2.4
SMPD1-209ENST00000533196 DUOX1Q9NRD9 1551 aa30.05■■■□□ 2.4
SMPD1-209ENST00000533196 PASKQ96RG2 1323 aa30.03■■■□□ 2.4
SMPD1-209ENST00000533196 MYH3P11055 1940 aa30.03■■■□□ 2.4
SMPD1-209ENST00000533196 VAMP4O75379 141 aa30.03■■■□□ 2.4
SMPD1-209ENST00000533196 IGKV5-2P06315 115 aa30.03■■■□□ 2.4
SMPD1-209ENST00000533196 SCNN1DP51172 638 aa30.03■■■□□ 2.4
SMPD1-209ENST00000533196 MYH16Q9H6N6 1097 aa30.03■■■□□ 2.4
SMPD1-209ENST00000533196 NSFL1CQ9UNZ2 370 aaKnown RBP30.03■■■□□ 2.4
SMPD1-209ENST00000533196 CLEC11AQ9Y240 323 aa30.03■■■□□ 2.4
SMPD1-209ENST00000533196 LTBP1Q14766 1721 aa30.02■■■□□ 2.4
SMPD1-209ENST00000533196 CXCL9Q07325 125 aa30.02■■■□□ 2.4
SMPD1-209ENST00000533196 FLIIQ13045 1269 aa30.02■■■□□ 2.4
SMPD1-209ENST00000533196 G2E3Q7L622 706 aa30.02■■■□□ 2.4
SMPD1-209ENST00000533196 CREBZFQ9NS37 354 aa30.02■■■□□ 2.4
SMPD1-209ENST00000533196 EXOSC9Q06265 439 aaKnown RBP30.01■■■□□ 2.39
SMPD1-209ENST00000533196 ITGBL1O95965 494 aaPredicted RBP30■■■□□ 2.39
SMPD1-209ENST00000533196 TNIP1Q15025 636 aa30■■■□□ 2.39
SMPD1-209ENST00000533196 WASHC4Q2M389 1173 aa30■■■□□ 2.39
SMPD1-209ENST00000533196 CIAPIN1Q6FI81 312 aa30■■■□□ 2.39
SMPD1-209ENST00000533196 EYA3Q99504 573 aa30■■■□□ 2.39
SMPD1-209ENST00000533196 COL4A1P02462 1669 aa29.99■■■□□ 2.39
SMPD1-209ENST00000533196 NEURL1BA8MQ27 555 aa29.99■■■□□ 2.39
SMPD1-209ENST00000533196 USP50Q70EL3 339 aaPredicted RBP29.99■■■□□ 2.39
SMPD1-209ENST00000533196 SEC31BQ9NQW1 1179 aa29.99■■■□□ 2.39
SMPD1-209ENST00000533196 PODXL2Q9NZ53 605 aa29.99■■■□□ 2.39
SMPD1-209ENST00000533196 EPS15P42566 896 aa29.98■■■□□ 2.39
SMPD1-209ENST00000533196 GPSM2P81274 684 aa29.98■■■□□ 2.39
SMPD1-209ENST00000533196 FKBP5Q13451 457 aaPredicted RBP29.98■■■□□ 2.39
SMPD1-209ENST00000533196 GPRC5DQ9NZD1 345 aa29.97■■■□□ 2.39
SMPD1-209ENST00000533196 POLLQ9UGP5 575 aa29.97■■■□□ 2.39
SMPD1-209ENST00000533196 C6orf229H3BNL8 230 aa29.96■■■□□ 2.39
SMPD1-209ENST00000533196 CTSWP56202 376 aa29.96■■■□□ 2.39
SMPD1-209ENST00000533196 CWF19L2Q2TBE0 894 aaKnown RBP29.96■■■□□ 2.39
SMPD1-209ENST00000533196 CNTROBQ8N137 903 aa29.96■■■□□ 2.39
SMPD1-209ENST00000533196 DNAAF4Q8WXU2 420 aa29.96■■■□□ 2.39
SMPD1-209ENST00000533196 JARID2Q92833 1246 aaPredicted RBP29.96■■■□□ 2.39
SMPD1-209ENST00000533196 SPINK5Q9NQ38 1064 aaPredicted RBP29.96■■■□□ 2.39
SMPD1-209ENST00000533196 H7C1W4 665 aa29.95■■■□□ 2.39
SMPD1-209ENST00000533196 ANKRD18AQ8IVF6 992 aa29.95■■■□□ 2.39
SMPD1-209ENST00000533196 TBC1D16Q8TBP0 767 aa29.95■■■□□ 2.39
SMPD1-209ENST00000533196 ADARB2Q9NS39 739 aaKnown RBP29.95■■■□□ 2.39
SMPD1-209ENST00000533196 RTL9Q8NET4 1388 aa29.94■■■□□ 2.38
SMPD1-209ENST00000533196 LINS1Q8NG48 757 aa29.94■■■□□ 2.38
SMPD1-209ENST00000533196 CDC5LQ99459 802 aaKnown RBP29.94■■■□□ 2.38
SMPD1-209ENST00000533196 YDJCA8MPS7 323 aa29.93■■■□□ 2.38
SMPD1-209ENST00000533196 GMPSP49915 693 aaPredicted RBP29.93■■■□□ 2.38
SMPD1-209ENST00000533196 GCKRQ14397 625 aa29.93■■■□□ 2.38
SMPD1-209ENST00000533196 MAP1SQ66K74 1059 aaPredicted RBP29.93■■■□□ 2.38
SMPD1-209ENST00000533196 TTLL11Q8NHH1 800 aa29.93■■■□□ 2.38
SMPD1-209ENST00000533196 ZNF521Q96K83 1311 aa29.93■■■□□ 2.38
SMPD1-209ENST00000533196 TMEM88BA6NKF7 163 aa29.92■■■□□ 2.38
SMPD1-209ENST00000533196 RAD17O75943 681 aa29.92■■■□□ 2.38
SMPD1-209ENST00000533196 PLA2G12BQ9BX93 195 aa29.92■■■□□ 2.38
SMPD1-209ENST00000533196 BCL2L13Q9BXK5 485 aa29.92■■■□□ 2.38
SMPD1-209ENST00000533196 CCDC85AQ96PX6 553 aaPredicted RBP29.91■■■□□ 2.38
SMPD1-209ENST00000533196 ZC3H12CQ9C0D7 883 aaKnown RBP29.91■■■□□ 2.38
SMPD1-209ENST00000533196 ANKIB1Q9P2G1 1089 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms