RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 COL4A1P02462 1669 aa20.36■□□□□ 0.85
LDLRAD3-205ENST00000532490 FANCIQ9NVI1 1328 aa20.36■□□□□ 0.85
LDLRAD3-205ENST00000532490 TMX4Q9H1E5 349 aaPredicted RBP20.36■□□□□ 0.85
LDLRAD3-205ENST00000532490 SALL2Q9Y467 1007 aaPredicted RBP20.36■□□□□ 0.85
LDLRAD3-205ENST00000532490 DDX58O95786 925 aaKnown RBP20.35■□□□□ 0.85
LDLRAD3-205ENST00000532490 CHADLQ6NUI6 762 aa20.35■□□□□ 0.85
LDLRAD3-205ENST00000532490 KSR2Q6VAB6 950 aa20.35■□□□□ 0.85
LDLRAD3-205ENST00000532490 G2E3Q7L622 706 aa20.35■□□□□ 0.85
LDLRAD3-205ENST00000532490 TMC4Q7Z404 712 aa20.35■□□□□ 0.85
LDLRAD3-205ENST00000532490 MPNDQ8N594 471 aa20.35■□□□□ 0.85
LDLRAD3-205ENST00000532490 CELF1Q92879 486 aaKnown RBP20.35■□□□□ 0.85
LDLRAD3-205ENST00000532490 MAP3K2Q9Y2U5 619 aa20.35■□□□□ 0.85
LDLRAD3-205ENST00000532490 LRRC37AA6NMS7 1700 aa20.35■□□□□ 0.85
LDLRAD3-205ENST00000532490 PI4KAP2A4QPH2 592 aa20.34■□□□□ 0.85
LDLRAD3-205ENST00000532490 PPIP5K2O43314 1243 aa20.34■□□□□ 0.85
LDLRAD3-205ENST00000532490 PCCAP05165 728 aaPredicted RBP20.34■□□□□ 0.85
LDLRAD3-205ENST00000532490 EIF6P56537 245 aaKnown RBP20.34■□□□□ 0.85
LDLRAD3-205ENST00000532490 AOC3Q16853 763 aa20.34■□□□□ 0.85
LDLRAD3-205ENST00000532490 DPP8Q6V1X1 898 aaPredicted RBP20.34■□□□□ 0.85
LDLRAD3-205ENST00000532490 PI4KAP1Q8N8J0 262 aa20.34■□□□□ 0.85
LDLRAD3-205ENST00000532490 SUPT20HQ8NEM7 779 aa20.34■□□□□ 0.85
LDLRAD3-205ENST00000532490 STK31Q9BXU1 1019 aa20.34■□□□□ 0.85
LDLRAD3-205ENST00000532490 CWC25Q9NXE8 425 aaPredicted RBP20.34■□□□□ 0.85
LDLRAD3-205ENST00000532490 HACL1Q9UJ83 578 aa20.34■□□□□ 0.85
LDLRAD3-205ENST00000532490 IGKV5-2P06315 115 aa20.33■□□□□ 0.85
LDLRAD3-205ENST00000532490 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
LDLRAD3-205ENST00000532490 SPINK5Q9NQ38 1064 aaPredicted RBP20.33■□□□□ 0.85
LDLRAD3-205ENST00000532490 ADAMTSL1Q8N6G6 1762 aa20.33■□□□□ 0.84
LDLRAD3-205ENST00000532490 DUOX1Q9NRD9 1551 aa20.33■□□□□ 0.84
LDLRAD3-205ENST00000532490 VAMP4O75379 141 aa20.32■□□□□ 0.84
LDLRAD3-205ENST00000532490 SLC4A2P04920 1241 aa20.32■□□□□ 0.84
LDLRAD3-205ENST00000532490 EPHX2P34913 555 aa20.32■□□□□ 0.84
LDLRAD3-205ENST00000532490 LDHDQ86WU2 507 aa20.32■□□□□ 0.84
LDLRAD3-205ENST00000532490 NIM1KQ8IY84 436 aa20.32■□□□□ 0.84
LDLRAD3-205ENST00000532490 KLRG1Q96E93 195 aa20.32■□□□□ 0.84
LDLRAD3-205ENST00000532490 LTBP1Q14766 1721 aa20.32■□□□□ 0.84
LDLRAD3-205ENST00000532490 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
LDLRAD3-205ENST00000532490 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
LDLRAD3-205ENST00000532490 GJA3Q9Y6H8 435 aa20.31■□□□□ 0.84
LDLRAD3-205ENST00000532490 CACNA1FO60840 1977 aa20.3■□□□□ 0.84
LDLRAD3-205ENST00000532490 SCNN1DP51172 638 aa20.3■□□□□ 0.84
LDLRAD3-205ENST00000532490 EXOSC9Q06265 439 aaKnown RBP20.3■□□□□ 0.84
LDLRAD3-205ENST00000532490 ZNRF3Q9ULT6 936 aa20.3■□□□□ 0.84
LDLRAD3-205ENST00000532490 CDHR2Q9BYE9 1310 aa20.29■□□□□ 0.84
LDLRAD3-205ENST00000532490 PDE8AO60658 829 aa20.29■□□□□ 0.84
LDLRAD3-205ENST00000532490 HSP90B1P14625 803 aaKnown RBP20.29■□□□□ 0.84
LDLRAD3-205ENST00000532490 RPS8P62241 208 aaKnown RBP20.29■□□□□ 0.84
LDLRAD3-205ENST00000532490 SEC31BQ9NQW1 1179 aa20.29■□□□□ 0.84
LDLRAD3-205ENST00000532490 PASKQ96RG2 1323 aa20.28■□□□□ 0.84
LDLRAD3-205ENST00000532490 ITGBL1O95965 494 aaPredicted RBP20.28■□□□□ 0.84
LDLRAD3-205ENST00000532490 CXCL9Q07325 125 aa20.28■□□□□ 0.84
LDLRAD3-205ENST00000532490 FLIIQ13045 1269 aa20.28■□□□□ 0.84
LDLRAD3-205ENST00000532490 EAPPQ56P03 285 aaPredicted RBP20.28■□□□□ 0.84
LDLRAD3-205ENST00000532490 PNMA8AQ86V59 439 aaPredicted RBP20.28■□□□□ 0.84
LDLRAD3-205ENST00000532490 JMYQ8N9B5 988 aa20.28■□□□□ 0.84
LDLRAD3-205ENST00000532490 NEURL1BA8MQ27 555 aa20.27■□□□□ 0.84
LDLRAD3-205ENST00000532490 EPS15P42566 896 aa20.27■□□□□ 0.84
LDLRAD3-205ENST00000532490 GPSM2P81274 684 aa20.27■□□□□ 0.84
LDLRAD3-205ENST00000532490 CWF19L2Q2TBE0 894 aaKnown RBP20.27■□□□□ 0.84
LDLRAD3-205ENST00000532490 POLLQ9UGP5 575 aa20.27■□□□□ 0.84
LDLRAD3-205ENST00000532490 ZNF521Q96K83 1311 aa20.27■□□□□ 0.83
LDLRAD3-205ENST00000532490 NEXNQ0ZGT2 675 aa20.26■□□□□ 0.83
LDLRAD3-205ENST00000532490 CCDC152Q4G0S7 254 aa20.26■□□□□ 0.83
LDLRAD3-205ENST00000532490 NSFL1CQ9UNZ2 370 aaKnown RBP20.26■□□□□ 0.83
LDLRAD3-205ENST00000532490 YDJCA8MPS7 323 aa20.25■□□□□ 0.83
LDLRAD3-205ENST00000532490 H7C1W4 665 aa20.25■□□□□ 0.83
LDLRAD3-205ENST00000532490 LMOD1P29536 600 aaPredicted RBP20.24■□□□□ 0.83
LDLRAD3-205ENST00000532490 MYH16Q9H6N6 1097 aa20.24■□□□□ 0.83
LDLRAD3-205ENST00000532490 CREBZFQ9NS37 354 aa20.24■□□□□ 0.83
LDLRAD3-205ENST00000532490 PODXL2Q9NZ53 605 aa20.24■□□□□ 0.83
LDLRAD3-205ENST00000532490 CLEC11AQ9Y240 323 aa20.24■□□□□ 0.83
LDLRAD3-205ENST00000532490 PCNTO95613 3336 aa20.24■□□□□ 0.83
LDLRAD3-205ENST00000532490 CTSWP56202 376 aa20.23■□□□□ 0.83
LDLRAD3-205ENST00000532490 WASHC4Q2M389 1173 aa20.23■□□□□ 0.83
LDLRAD3-205ENST00000532490 MAP1SQ66K74 1059 aaPredicted RBP20.23■□□□□ 0.83
LDLRAD3-205ENST00000532490 CIAPIN1Q6FI81 312 aa20.23■□□□□ 0.83
LDLRAD3-205ENST00000532490 TTLL11Q8NHH1 800 aa20.23■□□□□ 0.83
LDLRAD3-205ENST00000532490 TBC1D16Q8TBP0 767 aa20.23■□□□□ 0.83
LDLRAD3-205ENST00000532490 DNAAF4Q8WXU2 420 aa20.23■□□□□ 0.83
LDLRAD3-205ENST00000532490 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
LDLRAD3-205ENST00000532490 GPRC5DQ9NZD1 345 aa20.23■□□□□ 0.83
LDLRAD3-205ENST00000532490 MYH3P11055 1940 aa20.22■□□□□ 0.83
LDLRAD3-205ENST00000532490 RAD17O75943 681 aa20.22■□□□□ 0.83
LDLRAD3-205ENST00000532490 CASP7P55210 303 aa20.22■□□□□ 0.83
LDLRAD3-205ENST00000532490 FKBP5Q13451 457 aaPredicted RBP20.22■□□□□ 0.83
LDLRAD3-205ENST00000532490 GCKRQ14397 625 aa20.22■□□□□ 0.83
LDLRAD3-205ENST00000532490 USP50Q70EL3 339 aaPredicted RBP20.22■□□□□ 0.83
LDLRAD3-205ENST00000532490 CNTROBQ8N137 903 aa20.22■□□□□ 0.83
LDLRAD3-205ENST00000532490 C6orf229H3BNL8 230 aa20.21■□□□□ 0.83
LDLRAD3-205ENST00000532490 GMPSP49915 693 aaPredicted RBP20.21■□□□□ 0.83
LDLRAD3-205ENST00000532490 RTL9Q8NET4 1388 aa20.21■□□□□ 0.83
LDLRAD3-205ENST00000532490 RIMBP2O15034 1052 aa20.2■□□□□ 0.82
LDLRAD3-205ENST00000532490 TNIP1Q15025 636 aa20.2■□□□□ 0.82
LDLRAD3-205ENST00000532490 UBE3BQ7Z3V4 1068 aa20.2■□□□□ 0.82
LDLRAD3-205ENST00000532490 LINS1Q8NG48 757 aa20.2■□□□□ 0.82
LDLRAD3-205ENST00000532490 GPR101Q96P66 508 aaPredicted RBP20.2■□□□□ 0.82
LDLRAD3-205ENST00000532490 PLA2G12BQ9BX93 195 aa20.2■□□□□ 0.82
LDLRAD3-205ENST00000532490 ADARB2Q9NS39 739 aaKnown RBP20.2■□□□□ 0.82
LDLRAD3-205ENST00000532490 ANKRD18AQ8IVF6 992 aa20.19■□□□□ 0.82
LDLRAD3-205ENST00000532490 EYA3Q99504 573 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms