RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 ALDH1L2Q3SY69 923 aa18.47■□□□□ 0.55
CTSB-224ENST00000532392 BEND3Q5T5X7 828 aa18.47■□□□□ 0.55
CTSB-224ENST00000532392 LAMB2P55268 1798 aa18.47■□□□□ 0.55
CTSB-224ENST00000532392 SP8Q8IXZ3 490 aa18.46■□□□□ 0.55
CTSB-224ENST00000532392 PSMD1Q99460 953 aa18.46■□□□□ 0.55
CTSB-224ENST00000532392 ZNF277Q9NRM2 450 aaPredicted RBP18.46■□□□□ 0.55
CTSB-224ENST00000532392 SNED1Q8TER0 1413 aa18.46■□□□□ 0.55
CTSB-224ENST00000532392 CCDC152Q4G0S7 254 aa18.45■□□□□ 0.54
CTSB-224ENST00000532392 UBE3BQ7Z3V4 1068 aa18.45■□□□□ 0.54
CTSB-224ENST00000532392 TMC4Q7Z404 712 aa18.45■□□□□ 0.54
CTSB-224ENST00000532392 SLC51AQ86UW1 340 aa18.45■□□□□ 0.54
CTSB-224ENST00000532392 BCL2L13Q9BXK5 485 aa18.45■□□□□ 0.54
CTSB-224ENST00000532392 SLC4A10Q6U841 1118 aa18.44■□□□□ 0.54
CTSB-224ENST00000532392 CELF1Q92879 486 aaKnown RBP18.44■□□□□ 0.54
CTSB-224ENST00000532392 SMC4Q9NTJ3 1288 aa18.44■□□□□ 0.54
CTSB-224ENST00000532392 PTPRCP08575 1304 aa18.44■□□□□ 0.54
CTSB-224ENST00000532392 IARSP41252 1262 aaKnown RBP18.43■□□□□ 0.54
CTSB-224ENST00000532392 CASP7P55210 303 aa18.43■□□□□ 0.54
CTSB-224ENST00000532392 CTSWP56202 376 aa18.43■□□□□ 0.54
CTSB-224ENST00000532392 RPS8P62241 208 aaKnown RBP18.43■□□□□ 0.54
CTSB-224ENST00000532392 SEC31BQ9NQW1 1179 aa18.43■□□□□ 0.54
CTSB-224ENST00000532392 CCDC88AQ3V6T2 1871 aa18.43■□□□□ 0.54
CTSB-224ENST00000532392 KDM2BQ8NHM5 1336 aa18.43■□□□□ 0.54
CTSB-224ENST00000532392 GLTPD2A6NH11 291 aa18.42■□□□□ 0.54
CTSB-224ENST00000532392 ALDH1L1O75891 902 aa18.42■□□□□ 0.54
CTSB-224ENST00000532392 TTLL11Q8NHH1 800 aa18.42■□□□□ 0.54
CTSB-224ENST00000532392 PLA2G12BQ9BX93 195 aa18.42■□□□□ 0.54
CTSB-224ENST00000532392 DPY19L2Q6NUT2 758 aa18.41■□□□□ 0.54
CTSB-224ENST00000532392 MPNDQ8N594 471 aa18.41■□□□□ 0.54
CTSB-224ENST00000532392 CCDC85AQ96PX6 553 aaPredicted RBP18.41■□□□□ 0.54
CTSB-224ENST00000532392 SRCIN1Q9C0H9 1055 aa18.41■□□□□ 0.54
CTSB-224ENST00000532392 RARSP54136 660 aaKnown RBP18.4■□□□□ 0.54
CTSB-224ENST00000532392 BRPF1P55201 1214 aaPredicted RBP18.4■□□□□ 0.54
CTSB-224ENST00000532392 DPP8Q6V1X1 898 aaPredicted RBP18.4■□□□□ 0.54
CTSB-224ENST00000532392 SUPT20HQ8NEM7 779 aa18.4■□□□□ 0.54
CTSB-224ENST00000532392 RTFDC1Q9BY42 306 aaPredicted RBP18.4■□□□□ 0.54
CTSB-224ENST00000532392 NMRK2Q9NPI5 230 aa18.4■□□□□ 0.54
CTSB-224ENST00000532392 ZBED9Q6R2W3 1325 aa18.4■□□□□ 0.54
CTSB-224ENST00000532392 TAF1P21675 1872 aa18.39■□□□□ 0.54
CTSB-224ENST00000532392 DICER1Q9UPY3 1922 aaKnown RBP18.39■□□□□ 0.53
CTSB-224ENST00000532392 GRM8O00222 908 aa18.39■□□□□ 0.53
CTSB-224ENST00000532392 KIF3CO14782 793 aa18.39■□□□□ 0.53
CTSB-224ENST00000532392 VPS33BQ9H267 617 aa18.39■□□□□ 0.53
CTSB-224ENST00000532392 GREM2Q9H772 168 aa18.39■□□□□ 0.53
CTSB-224ENST00000532392 CSF1RP07333 972 aa18.38■□□□□ 0.53
CTSB-224ENST00000532392 ANKRD18AQ8IVF6 992 aa18.38■□□□□ 0.53
CTSB-224ENST00000532392 JDP2Q8WYK2 163 aa18.38■□□□□ 0.53
CTSB-224ENST00000532392 CDC5LQ99459 802 aaKnown RBP18.38■□□□□ 0.53
CTSB-224ENST00000532392 C9orf78Q9NZ63 289 aaPredicted RBP18.38■□□□□ 0.53
CTSB-224ENST00000532392 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
CTSB-224ENST00000532392 LARGE2Q8N3Y3 721 aa18.37■□□□□ 0.53
CTSB-224ENST00000532392 RRAGCQ9HB90 399 aa18.37■□□□□ 0.53
CTSB-224ENST00000532392 NSFL1CQ9UNZ2 370 aaKnown RBP18.37■□□□□ 0.53
CTSB-224ENST00000532392 RTL9Q8NET4 1388 aa18.37■□□□□ 0.53
CTSB-224ENST00000532392 COL4A1P02462 1669 aa18.37■□□□□ 0.53
CTSB-224ENST00000532392 TIAM2Q8IVF5 1701 aa18.37■□□□□ 0.53
CTSB-224ENST00000532392 FZD9O00144 591 aa18.36■□□□□ 0.53
CTSB-224ENST00000532392 PPIP5K2O43314 1243 aa18.36■□□□□ 0.53
CTSB-224ENST00000532392 GPSM2P81274 684 aa18.36■□□□□ 0.53
CTSB-224ENST00000532392 FOXO4P98177 505 aa18.36■□□□□ 0.53
CTSB-224ENST00000532392 AOC3Q16853 763 aa18.36■□□□□ 0.53
CTSB-224ENST00000532392 DDNO94850 711 aaPredicted RBP18.35■□□□□ 0.53
CTSB-224ENST00000532392 C1QTNF8P60827 252 aa18.35■□□□□ 0.53
CTSB-224ENST00000532392 UTYO14607 1347 aa18.34■□□□□ 0.53
CTSB-224ENST00000532392 ITGA6P23229 1130 aa18.34■□□□□ 0.53
CTSB-224ENST00000532392 API5Q9BZZ5 524 aaKnown RBP18.34■□□□□ 0.53
CTSB-224ENST00000532392 BSDC1Q9NW68 430 aaPredicted RBP18.34■□□□□ 0.53
CTSB-224ENST00000532392 PODXL2Q9NZ53 605 aa18.34■□□□□ 0.53
CTSB-224ENST00000532392 MYH3P11055 1940 aa18.33■□□□□ 0.53
CTSB-224ENST00000532392 KIF16BQ96L93 1317 aa18.33■□□□□ 0.53
CTSB-224ENST00000532392 LRRC37AA6NMS7 1700 aa18.33■□□□□ 0.52
CTSB-224ENST00000532392 NBPF7P0C2Y1 421 aaPredicted RBP18.33■□□□□ 0.52
CTSB-224ENST00000532392 VEGFAP15692 232 aaPredicted RBP18.33■□□□□ 0.52
CTSB-224ENST00000532392 EIF6P56537 245 aaKnown RBP18.33■□□□□ 0.52
CTSB-224ENST00000532392 KIAA2012Q0VF49 1180 aa18.33■□□□□ 0.52
CTSB-224ENST00000532392 FAM161AQ3B820 660 aa18.33■□□□□ 0.52
CTSB-224ENST00000532392 NIM1KQ8IY84 436 aa18.33■□□□□ 0.52
CTSB-224ENST00000532392 ARHGAP45Q92619 1136 aa18.33■□□□□ 0.52
CTSB-224ENST00000532392 POLLQ9UGP5 575 aa18.33■□□□□ 0.52
CTSB-224ENST00000532392 ZNF541Q9H0D2 1346 aa18.32■□□□□ 0.52
CTSB-224ENST00000532392 C6orf229H3BNL8 230 aa18.32■□□□□ 0.52
CTSB-224ENST00000532392 TOMM70O94826 608 aa18.32■□□□□ 0.52
CTSB-224ENST00000532392 IGHMBP2P38935 993 aaKnown RBP18.32■□□□□ 0.52
CTSB-224ENST00000532392 WASHC4Q2M389 1173 aa18.32■□□□□ 0.52
CTSB-224ENST00000532392 EPHA10Q5JZY3 1008 aa18.32■□□□□ 0.52
CTSB-224ENST00000532392 LMBR1LQ6UX01 489 aa18.32■□□□□ 0.52
CTSB-224ENST00000532392 ANKIB1Q9P2G1 1089 aa18.32■□□□□ 0.52
CTSB-224ENST00000532392 COL4A5P29400 1685 aa18.31■□□□□ 0.52
CTSB-224ENST00000532392 ANKRD18BA2A2Z9 1011 aa18.31■□□□□ 0.52
CTSB-224ENST00000532392 POTECB2RU33 542 aa18.31■□□□□ 0.52
CTSB-224ENST00000532392 BCAR3O75815 825 aa18.31■□□□□ 0.52
CTSB-224ENST00000532392 CCT4P50991 539 aaKnown RBP18.31■□□□□ 0.52
CTSB-224ENST00000532392 C16orf71Q8IYS4 520 aaPredicted RBP18.31■□□□□ 0.52
CTSB-224ENST00000532392 TBC1D16Q8TBP0 767 aa18.31■□□□□ 0.52
CTSB-224ENST00000532392 SUCLG2Q96I99 432 aa18.31■□□□□ 0.52
CTSB-224ENST00000532392 USP44Q9H0E7 712 aa18.31■□□□□ 0.52
CTSB-224ENST00000532392 MINPP1Q9UNW1 487 aa18.31■□□□□ 0.52
CTSB-224ENST00000532392 CHMP3Q9Y3E7 222 aa18.31■□□□□ 0.52
CTSB-224ENST00000532392 DUOX1Q9NRD9 1551 aa18.3■□□□□ 0.52
CTSB-224ENST00000532392 IPO8O15397 1037 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms