RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TANGO6Q9C0B7 1094 aa13.15□□□□□ -0.3
PTPRK-221ENST00000532331 NLRP5P59047 1200 aa13.15□□□□□ -0.3
PTPRK-221ENST00000532331 RHPN1Q8TCX5 695 aa13.15□□□□□ -0.3
PTPRK-221ENST00000532331 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
PTPRK-221ENST00000532331 ALDH1B1P30837 517 aa13.15□□□□□ -0.3
PTPRK-221ENST00000532331 PDE6BP35913 854 aa13.15□□□□□ -0.3
PTPRK-221ENST00000532331 SSRP1Q08945 709 aaKnown RBP13.15□□□□□ -0.3
PTPRK-221ENST00000532331 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
PTPRK-221ENST00000532331 CCDC194A0A1B0GVG4 234 aa13.15□□□□□ -0.31
PTPRK-221ENST00000532331 TRIM37O94972 964 aa13.15□□□□□ -0.31
PTPRK-221ENST00000532331 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.31
PTPRK-221ENST00000532331 DNAJC10Q8IXB1 793 aa13.15□□□□□ -0.31
PTPRK-221ENST00000532331 SAMD9LQ8IVG5 1584 aa13.14□□□□□ -0.31
PTPRK-221ENST00000532331 TMEM266Q2M3C6 531 aa13.14□□□□□ -0.31
PTPRK-221ENST00000532331 CWF19L2Q2TBE0 894 aaKnown RBP13.14□□□□□ -0.31
PTPRK-221ENST00000532331 CEP57L1Q8IYX8 460 aa13.14□□□□□ -0.31
PTPRK-221ENST00000532331 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
PTPRK-221ENST00000532331 PHACTR3Q96KR7 559 aa13.14□□□□□ -0.31
PTPRK-221ENST00000532331 MAGEB6P1A0A0J9YX57 407 aa13.13□□□□□ -0.31
PTPRK-221ENST00000532331 CBFA2T2O43439 604 aa13.13□□□□□ -0.31
PTPRK-221ENST00000532331 NIM1KQ8IY84 436 aa13.13□□□□□ -0.31
PTPRK-221ENST00000532331 HCLS1P14317 486 aaPredicted RBP13.13□□□□□ -0.31
PTPRK-221ENST00000532331 FAM89AQ96GI7 184 aa13.13□□□□□ -0.31
PTPRK-221ENST00000532331 MEIS3Q99687 375 aa13.13□□□□□ -0.31
PTPRK-221ENST00000532331 BABAM1Q9NWV8 329 aa13.13□□□□□ -0.31
PTPRK-221ENST00000532331 SPC24Q8NBT2 197 aa13.13□□□□□ -0.31
PTPRK-221ENST00000532331 BIN2Q9UBW5 565 aaPredicted RBP13.13□□□□□ -0.31
PTPRK-221ENST00000532331 HAND2P61296 217 aa13.13□□□□□ -0.31
PTPRK-221ENST00000532331 TXLNBQ8N3L3 684 aa13.13□□□□□ -0.31
PTPRK-221ENST00000532331 B4DLN1 442 aa13.12□□□□□ -0.31
PTPRK-221ENST00000532331 A1BGP04217 495 aa13.12□□□□□ -0.31
PTPRK-221ENST00000532331 MRPL12P52815 198 aaKnown RBP13.12□□□□□ -0.31
PTPRK-221ENST00000532331 PLS1Q14651 629 aa13.12□□□□□ -0.31
PTPRK-221ENST00000532331 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
PTPRK-221ENST00000532331 NUP62CLQ9H1M0 184 aa13.12□□□□□ -0.31
PTPRK-221ENST00000532331 PDE8AO60658 829 aa13.12□□□□□ -0.31
PTPRK-221ENST00000532331 IL13P35225 146 aa13.12□□□□□ -0.31
PTPRK-221ENST00000532331 SLC9C2Q5TAH2 1124 aa13.12□□□□□ -0.31
PTPRK-221ENST00000532331 NCOA7Q8NI08 942 aa13.12□□□□□ -0.31
PTPRK-221ENST00000532331 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
PTPRK-221ENST00000532331 DEF6Q9H4E7 631 aa13.12□□□□□ -0.31
PTPRK-221ENST00000532331 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
PTPRK-221ENST00000532331 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
PTPRK-221ENST00000532331 METP08581 1390 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 PATL2C9JE40 543 aaKnown RBP13.11□□□□□ -0.31
PTPRK-221ENST00000532331 UNC5CLQ8IV45 518 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 ARHGAP27Q6ZUM4 889 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 KRT23Q9C075 422 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 DENND2AQ9ULE3 1009 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 KIAA0232Q92628 1395 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 ESR2Q92731 530 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 JAG2Q9Y219 1238 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 TTC37Q6PGP7 1564 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 MAGI3Q5TCQ9 1506 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 EAPPQ56P03 285 aaPredicted RBP13.11□□□□□ -0.31
PTPRK-221ENST00000532331 HOOK2Q96ED9 719 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 C8orf76Q96K31 380 aa13.11□□□□□ -0.31
PTPRK-221ENST00000532331 DESP17661 470 aa13.1□□□□□ -0.31
PTPRK-221ENST00000532331 SAMM50Q9Y512 469 aa13.1□□□□□ -0.31
PTPRK-221ENST00000532331 MAST3O60307 1309 aa13.1□□□□□ -0.31
PTPRK-221ENST00000532331 PICK1Q9NRD5 415 aa13.1□□□□□ -0.31
PTPRK-221ENST00000532331 ERVK-7P63135 1459 aa13.1□□□□□ -0.31
PTPRK-221ENST00000532331 PPP1R12BO60237 982 aaPredicted RBP13.1□□□□□ -0.31
PTPRK-221ENST00000532331 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
PTPRK-221ENST00000532331 HIBADHP31937 336 aaKnown RBP13.1□□□□□ -0.31
PTPRK-221ENST00000532331 KDM5CP41229 1560 aa13.1□□□□□ -0.31
PTPRK-221ENST00000532331 ATP8B2P98198 1209 aa13.1□□□□□ -0.31
PTPRK-221ENST00000532331 ITGA6P23229 1130 aa13.1□□□□□ -0.31
PTPRK-221ENST00000532331 CCDC83Q8IWF9 413 aa13.1□□□□□ -0.31
PTPRK-221ENST00000532331 CCDC24Q8N4L8 307 aa13.1□□□□□ -0.31
PTPRK-221ENST00000532331 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
PTPRK-221ENST00000532331 C20orf194Q5TEA3 1177 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 NLGN1Q8N2Q7 840 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 CARD10Q9BWT7 1032 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 METTL22Q9BUU2 404 aaPredicted RBP13.09□□□□□ -0.31
PTPRK-221ENST00000532331 CNNM2Q9H8M5 875 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 HOXB7P09629 217 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 MCM9Q9NXL9 1143 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 SMTNL1A8MU46 457 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 GNAT2P19087 354 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 KRT24Q2M2I5 525 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 SEPT12Q8IYM1 358 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 PA2G4Q9UQ80 394 aaKnown RBP13.09□□□□□ -0.31
PTPRK-221ENST00000532331 WTAPQ15007 396 aa13.09□□□□□ -0.31
PTPRK-221ENST00000532331 UPF3BQ9BZI7 483 aaKnown RBP13.09□□□□□ -0.31
PTPRK-221ENST00000532331 ADGBQ8N7X0 1667 aa13.08□□□□□ -0.31
PTPRK-221ENST00000532331 H7C1D1 291 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 PPIP5K2O43314 1243 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 MCM4P33991 863 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 HMGN5P82970 282 aaKnown RBP13.08□□□□□ -0.32
PTPRK-221ENST00000532331 MPNDQ8N594 471 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 IFIT1BQ5T764 474 aaKnown RBP13.08□□□□□ -0.32
PTPRK-221ENST00000532331 TTC6Q86TZ1 520 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 C2CD5Q86YS7 1000 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 CCDC144CPQ8IYA2 1237 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 ERCC6L2Q5T890 1561 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 PHKG2P15735 406 aa13.08□□□□□ -0.32
PTPRK-221ENST00000532331 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms