RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 L3MBTL3Q96JM7 780 aaPredicted RBP16.07■□□□□ 0.16
C11orf54-210ENST00000531516 HACL1Q9UJ83 578 aa16.07■□□□□ 0.16
C11orf54-210ENST00000531516 SBF1O95248 1867 aa16.07■□□□□ 0.16
C11orf54-210ENST00000531516 FER1L6Q2WGJ9 1857 aa16.06■□□□□ 0.16
C11orf54-210ENST00000531516 PDE8AO60658 829 aa16.06■□□□□ 0.16
C11orf54-210ENST00000531516 FKBP5Q13451 457 aaPredicted RBP16.06■□□□□ 0.16
C11orf54-210ENST00000531516 PNMA8AQ86V59 439 aaPredicted RBP16.06■□□□□ 0.16
C11orf54-210ENST00000531516 GJA3Q9Y6H8 435 aa16.06■□□□□ 0.16
C11orf54-210ENST00000531516 EXOSC9Q06265 439 aaKnown RBP16.05■□□□□ 0.16
C11orf54-210ENST00000531516 CHADLQ6NUI6 762 aa16.05■□□□□ 0.16
C11orf54-210ENST00000531516 RTFDC1Q9BY42 306 aaPredicted RBP16.05■□□□□ 0.16
C11orf54-210ENST00000531516 CLEC11AQ9Y240 323 aa16.05■□□□□ 0.16
C11orf54-210ENST00000531516 TIAM2Q8IVF5 1701 aa16.05■□□□□ 0.16
C11orf54-210ENST00000531516 ZNF541Q9H0D2 1346 aa16.04■□□□□ 0.16
C11orf54-210ENST00000531516 RPS8P62241 208 aaKnown RBP16.04■□□□□ 0.16
C11orf54-210ENST00000531516 FLIIQ13045 1269 aa16.04■□□□□ 0.16
C11orf54-210ENST00000531516 LDHDQ86WU2 507 aa16.04■□□□□ 0.16
C11orf54-210ENST00000531516 EYA3Q99504 573 aa16.04■□□□□ 0.16
C11orf54-210ENST00000531516 ZNRF3Q9ULT6 936 aa16.04■□□□□ 0.16
C11orf54-210ENST00000531516 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
C11orf54-210ENST00000531516 G3V3G9 751 aa16.03■□□□□ 0.16
C11orf54-210ENST00000531516 C6orf229H3BNL8 230 aa16.03■□□□□ 0.16
C11orf54-210ENST00000531516 VAMP4O75379 141 aa16.03■□□□□ 0.16
C11orf54-210ENST00000531516 AOC3Q16853 763 aa16.03■□□□□ 0.16
C11orf54-210ENST00000531516 EAPPQ56P03 285 aaPredicted RBP16.03■□□□□ 0.16
C11orf54-210ENST00000531516 DCAF8Q5TAQ9 597 aa16.03■□□□□ 0.16
C11orf54-210ENST00000531516 CDC5LQ99459 802 aaKnown RBP16.03■□□□□ 0.16
C11orf54-210ENST00000531516 TAF1DQ9H5J8 278 aaPredicted RBP16.03■□□□□ 0.16
C11orf54-210ENST00000531516 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
C11orf54-210ENST00000531516 CDHR2Q9BYE9 1310 aa16.02■□□□□ 0.16
C11orf54-210ENST00000531516 CACNA1SQ13698 1873 aa16.02■□□□□ 0.16
C11orf54-210ENST00000531516 POTECB2RU33 542 aa16.02■□□□□ 0.16
C11orf54-210ENST00000531516 EPHX2P34913 555 aa16.02■□□□□ 0.16
C11orf54-210ENST00000531516 KIAA2012Q0VF49 1180 aa16.02■□□□□ 0.16
C11orf54-210ENST00000531516 TNIP1Q15025 636 aa16.02■□□□□ 0.16
C11orf54-210ENST00000531516 WASHC4Q2M389 1173 aa16.02■□□□□ 0.16
C11orf54-210ENST00000531516 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
C11orf54-210ENST00000531516 DNAAF4Q8WXU2 420 aa16.01■□□□□ 0.15
C11orf54-210ENST00000531516 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
C11orf54-210ENST00000531516 ANKIB1Q9P2G1 1089 aa16.01■□□□□ 0.15
C11orf54-210ENST00000531516 WDR90Q96KV7 1748 aa16.01■□□□□ 0.15
C11orf54-210ENST00000531516 NEURL1BA8MQ27 555 aa16■□□□□ 0.15
C11orf54-210ENST00000531516 LINS1Q8NG48 757 aa16■□□□□ 0.15
C11orf54-210ENST00000531516 BCL2L13Q9BXK5 485 aa16■□□□□ 0.15
C11orf54-210ENST00000531516 ZC3H12CQ9C0D7 883 aaKnown RBP16■□□□□ 0.15
C11orf54-210ENST00000531516 SNED1Q8TER0 1413 aa16■□□□□ 0.15
C11orf54-210ENST00000531516 E9PSI1 815 aa15.99■□□□□ 0.15
C11orf54-210ENST00000531516 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
C11orf54-210ENST00000531516 IGKV5-2P06315 115 aa15.99■□□□□ 0.15
C11orf54-210ENST00000531516 CTSWP56202 376 aa15.99■□□□□ 0.15
C11orf54-210ENST00000531516 CWF19L2Q2TBE0 894 aaKnown RBP15.99■□□□□ 0.15
C11orf54-210ENST00000531516 CIAPIN1Q6FI81 312 aa15.99■□□□□ 0.15
C11orf54-210ENST00000531516 G2E3Q7L622 706 aa15.99■□□□□ 0.15
C11orf54-210ENST00000531516 DICER1Q9UPY3 1922 aaKnown RBP15.98■□□□□ 0.15
C11orf54-210ENST00000531516 GCKRQ14397 625 aa15.98■□□□□ 0.15
C11orf54-210ENST00000531516 UBE3BQ7Z3V4 1068 aa15.98■□□□□ 0.15
C11orf54-210ENST00000531516 JARID2Q92833 1246 aaPredicted RBP15.98■□□□□ 0.15
C11orf54-210ENST00000531516 CCDC85AQ96PX6 553 aaPredicted RBP15.98■□□□□ 0.15
C11orf54-210ENST00000531516 GGA1Q9UJY5 639 aa15.98■□□□□ 0.15
C11orf54-210ENST00000531516 CCDC88AQ3V6T2 1871 aa15.97■□□□□ 0.15
C11orf54-210ENST00000531516 IGHMBP2P38935 993 aaKnown RBP15.97■□□□□ 0.15
C11orf54-210ENST00000531516 CXCL9Q07325 125 aa15.97■□□□□ 0.15
C11orf54-210ENST00000531516 USP50Q70EL3 339 aaPredicted RBP15.97■□□□□ 0.15
C11orf54-210ENST00000531516 CEP350Q5VT06 3117 aa15.96■□□□□ 0.15
C11orf54-210ENST00000531516 H7C1W4 665 aa15.96■□□□□ 0.15
C11orf54-210ENST00000531516 RIMBP2O15034 1052 aa15.96■□□□□ 0.15
C11orf54-210ENST00000531516 UFL1O94874 794 aa15.96■□□□□ 0.15
C11orf54-210ENST00000531516 GPSM2P81274 684 aa15.96■□□□□ 0.15
C11orf54-210ENST00000531516 KLRG1Q96E93 195 aa15.96■□□□□ 0.15
C11orf54-210ENST00000531516 SEC31BQ9NQW1 1179 aa15.96■□□□□ 0.15
C11orf54-210ENST00000531516 ADARB2Q9NS39 739 aaKnown RBP15.96■□□□□ 0.15
C11orf54-210ENST00000531516 PODXL2Q9NZ53 605 aa15.96■□□□□ 0.15
C11orf54-210ENST00000531516 XDHP47989 1333 aa15.95■□□□□ 0.14
C11orf54-210ENST00000531516 H7C1D1 291 aa15.95■□□□□ 0.14
C11orf54-210ENST00000531516 RAD17O75943 681 aa15.95■□□□□ 0.14
C11orf54-210ENST00000531516 TTLL11Q8NHH1 800 aa15.95■□□□□ 0.14
C11orf54-210ENST00000531516 TBC1D16Q8TBP0 767 aa15.95■□□□□ 0.14
C11orf54-210ENST00000531516 MPHOSPH8Q99549 860 aa15.95■□□□□ 0.14
C11orf54-210ENST00000531516 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
C11orf54-210ENST00000531516 CREBZFQ9NS37 354 aa15.95■□□□□ 0.14
C11orf54-210ENST00000531516 ATP2B4P23634 1241 aa15.94■□□□□ 0.14
C11orf54-210ENST00000531516 SCNN1DP51172 638 aa15.94■□□□□ 0.14
C11orf54-210ENST00000531516 CNTROBQ8N137 903 aa15.94■□□□□ 0.14
C11orf54-210ENST00000531516 DNAJC5GQ8N7S2 189 aa15.94■□□□□ 0.14
C11orf54-210ENST00000531516 BSDC1Q9NW68 430 aaPredicted RBP15.94■□□□□ 0.14
C11orf54-210ENST00000531516 C9orf78Q9NZ63 289 aaPredicted RBP15.94■□□□□ 0.14
C11orf54-210ENST00000531516 GPRC5DQ9NZD1 345 aa15.94■□□□□ 0.14
C11orf54-210ENST00000531516 RTL9Q8NET4 1388 aa15.93■□□□□ 0.14
C11orf54-210ENST00000531516 POTEIP0CG38 1075 aa15.93■□□□□ 0.14
C11orf54-210ENST00000531516 POTEJP0CG39 1038 aa15.93■□□□□ 0.14
C11orf54-210ENST00000531516 EPS15P42566 896 aa15.93■□□□□ 0.14
C11orf54-210ENST00000531516 GMPSP49915 693 aaPredicted RBP15.93■□□□□ 0.14
C11orf54-210ENST00000531516 SLC4A10Q6U841 1118 aa15.93■□□□□ 0.14
C11orf54-210ENST00000531516 PLA2G12BQ9BX93 195 aa15.93■□□□□ 0.14
C11orf54-210ENST00000531516 GREM2Q9H772 168 aa15.93■□□□□ 0.14
C11orf54-210ENST00000531516 DBNDD1Q9H9R9 158 aa15.93■□□□□ 0.14
C11orf54-210ENST00000531516 POLLQ9UGP5 575 aa15.93■□□□□ 0.14
C11orf54-210ENST00000531516 SCN4AP35499 1836 aa15.93■□□□□ 0.14
C11orf54-210ENST00000531516 ZNF521Q96K83 1311 aa15.93■□□□□ 0.14
C11orf54-210ENST00000531516 ECE2O60344 883 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms