RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 DDX60Q8IY21 1712 aaKnown RBP23.19■■□□□ 1.3
PTPN11-204ENST00000531326 CXCL9Q07325 125 aa23.18■■□□□ 1.3
PTPN11-204ENST00000531326 DEFB115Q30KQ5 88 aa23.18■■□□□ 1.3
PTPN11-204ENST00000531326 HDGFL1Q5TGJ6 251 aa23.17■■□□□ 1.3
PTPN11-204ENST00000531326 DPP8Q6V1X1 898 aaPredicted RBP23.17■■□□□ 1.3
PTPN11-204ENST00000531326 USP50Q70EL3 339 aaPredicted RBP23.17■■□□□ 1.3
PTPN11-204ENST00000531326 SUPT20HQ8NEM7 779 aa23.17■■□□□ 1.3
PTPN11-204ENST00000531326 ZNRF3Q9ULT6 936 aa23.17■■□□□ 1.3
PTPN11-204ENST00000531326 DUOX1Q9NRD9 1551 aa23.16■■□□□ 1.3
PTPN11-204ENST00000531326 GRAPQ13588 217 aa23.16■■□□□ 1.3
PTPN11-204ENST00000531326 NCBP3Q53F19 620 aaKnown RBP23.16■■□□□ 1.3
PTPN11-204ENST00000531326 DDX46Q7L014 1031 aaKnown RBP23.16■■□□□ 1.3
PTPN11-204ENST00000531326 MPNDQ8N594 471 aa23.16■■□□□ 1.3
PTPN11-204ENST00000531326 PLBD2Q8NHP8 589 aa23.16■■□□□ 1.3
PTPN11-204ENST00000531326 GRAPLQ8TC17 118 aaPredicted RBP23.16■■□□□ 1.3
PTPN11-204ENST00000531326 WBP1LQ9NX94 342 aa23.16■■□□□ 1.3
PTPN11-204ENST00000531326 GPRC5DQ9NZD1 345 aa23.16■■□□□ 1.3
PTPN11-204ENST00000531326 HOXB7P09629 217 aa23.15■■□□□ 1.3
PTPN11-204ENST00000531326 KIAA2012Q0VF49 1180 aa23.15■■□□□ 1.3
PTPN11-204ENST00000531326 ABT1Q9ULW3 272 aaKnown RBP23.15■■□□□ 1.3
PTPN11-204ENST00000531326 LRRC37AA6NMS7 1700 aa23.15■■□□□ 1.3
PTPN11-204ENST00000531326 TRPM7Q96QT4 1865 aa23.15■■□□□ 1.3
PTPN11-204ENST00000531326 CCDC27Q2M243 656 aa23.14■■□□□ 1.29
PTPN11-204ENST00000531326 ANKRD13DQ6ZTN6 518 aa23.14■■□□□ 1.29
PTPN11-204ENST00000531326 ISCA1Q9BUE6 129 aa23.14■■□□□ 1.29
PTPN11-204ENST00000531326 ADARB2Q9NS39 739 aaKnown RBP23.14■■□□□ 1.29
PTPN11-204ENST00000531326 WDR33Q9C0J8 1336 aaKnown RBP23.13■■□□□ 1.29
PTPN11-204ENST00000531326 COL4A1P02462 1669 aa23.13■■□□□ 1.29
PTPN11-204ENST00000531326 TRAF5O00463 557 aa23.13■■□□□ 1.29
PTPN11-204ENST00000531326 GMPSP49915 693 aaPredicted RBP23.13■■□□□ 1.29
PTPN11-204ENST00000531326 CST9Q5W186 159 aa23.13■■□□□ 1.29
PTPN11-204ENST00000531326 CFAP44Q96MT7 982 aa23.13■■□□□ 1.29
PTPN11-204ENST00000531326 PRDM10Q9NQV6 1147 aa23.13■■□□□ 1.29
PTPN11-204ENST00000531326 DBF4Q9UBU7 674 aaPredicted RBP23.13■■□□□ 1.29
PTPN11-204ENST00000531326 ATP5J2-PTCD1G3V325 749 aa23.12■■□□□ 1.29
PTPN11-204ENST00000531326 CTCFP49711 727 aaPredicted RBP23.12■■□□□ 1.29
PTPN11-204ENST00000531326 DUSP27Q5VZP5 1158 aa23.12■■□□□ 1.29
PTPN11-204ENST00000531326 AIDAQ96BJ3 306 aa23.12■■□□□ 1.29
PTPN11-204ENST00000531326 FAM89AQ96GI7 184 aa23.12■■□□□ 1.29
PTPN11-204ENST00000531326 YDJCA8MPS7 323 aa23.11■■□□□ 1.29
PTPN11-204ENST00000531326 CIAPIN1Q6FI81 312 aa23.11■■□□□ 1.29
PTPN11-204ENST00000531326 WWC1Q8IX03 1113 aa23.11■■□□□ 1.29
PTPN11-204ENST00000531326 MBIPQ9NS73 344 aa23.11■■□□□ 1.29
PTPN11-204ENST00000531326 RAD17O75943 681 aa23.1■■□□□ 1.29
PTPN11-204ENST00000531326 SALL2Q9Y467 1007 aaPredicted RBP23.1■■□□□ 1.29
PTPN11-204ENST00000531326 THSD7BQ9C0I4 1608 aa23.1■■□□□ 1.29
PTPN11-204ENST00000531326 ZNF853P0CG23 659 aa23.09■■□□□ 1.29
PTPN11-204ENST00000531326 SF3B3Q15393 1217 aaKnown RBP23.09■■□□□ 1.29
PTPN11-204ENST00000531326 TMC4Q7Z404 712 aa23.09■■□□□ 1.29
PTPN11-204ENST00000531326 CELF1Q92879 486 aaKnown RBP23.09■■□□□ 1.29
PTPN11-204ENST00000531326 HYPKQ9NX55 129 aa23.09■■□□□ 1.29
PTPN11-204ENST00000531326 LBX1P52954 281 aa23.08■■□□□ 1.29
PTPN11-204ENST00000531326 RTL5Q5HYW3 569 aaPredicted RBP23.08■■□□□ 1.29
PTPN11-204ENST00000531326 CDHR2Q9BYE9 1310 aa23.08■■□□□ 1.28
PTPN11-204ENST00000531326 HIRAP54198 1017 aaPredicted RBP23.07■■□□□ 1.28
PTPN11-204ENST00000531326 TNIP1Q15025 636 aa23.07■■□□□ 1.28
PTPN11-204ENST00000531326 CAPNS2Q96L46 248 aa23.07■■□□□ 1.28
PTPN11-204ENST00000531326 PGAP2Q9UHJ9 254 aa23.07■■□□□ 1.28
PTPN11-204ENST00000531326 SHTN1A0MZ66 631 aa23.06■■□□□ 1.28
PTPN11-204ENST00000531326 HSPA8P11142 646 aaKnown RBP23.06■■□□□ 1.28
PTPN11-204ENST00000531326 TRIM28Q13263 835 aaKnown RBP23.06■■□□□ 1.28
PTPN11-204ENST00000531326 CYP4F22Q6NT55 531 aa23.06■■□□□ 1.28
PTPN11-204ENST00000531326 TRPM4Q8TD43 1214 aa23.06■■□□□ 1.28
PTPN11-204ENST00000531326 BCL2L13Q9BXK5 485 aa23.06■■□□□ 1.28
PTPN11-204ENST00000531326 TLL2Q9Y6L7 1015 aa23.06■■□□□ 1.28
PTPN11-204ENST00000531326 MAP2K1Q02750 393 aaPredicted RBP23.05■■□□□ 1.28
PTPN11-204ENST00000531326 CALD1Q05682 793 aaKnown RBP23.05■■□□□ 1.28
PTPN11-204ENST00000531326 GLIS2Q9BZE0 524 aaPredicted RBP23.05■■□□□ 1.28
PTPN11-204ENST00000531326 PHAXQ9H814 394 aaKnown RBP23.05■■□□□ 1.28
PTPN11-204ENST00000531326 NSFL1CQ9UNZ2 370 aaKnown RBP23.05■■□□□ 1.28
PTPN11-204ENST00000531326 IRS4O14654 1257 aaPredicted RBP23.04■■□□□ 1.28
PTPN11-204ENST00000531326 PAXIP1Q6ZW49 1069 aaPredicted RBP23.04■■□□□ 1.28
PTPN11-204ENST00000531326 IFT57Q9NWB7 429 aa23.04■■□□□ 1.28
PTPN11-204ENST00000531326 POLLQ9UGP5 575 aa23.04■■□□□ 1.28
PTPN11-204ENST00000531326 CNOT7Q9UIV1 285 aaKnown RBP23.04■■□□□ 1.28
PTPN11-204ENST00000531326 ZNF521Q96K83 1311 aa23.04■■□□□ 1.28
PTPN11-204ENST00000531326 GPSM2P81274 684 aa23.03■■□□□ 1.28
PTPN11-204ENST00000531326 WASHC4Q2M389 1173 aa23.03■■□□□ 1.28
PTPN11-204ENST00000531326 DBNDD1Q9H9R9 158 aa23.03■■□□□ 1.28
PTPN11-204ENST00000531326 ZBTB12Q9Y330 459 aaPredicted RBP23.03■■□□□ 1.28
PTPN11-204ENST00000531326 ELL2O00472 640 aaPredicted RBP23.02■■□□□ 1.28
PTPN11-204ENST00000531326 CELF2O95319 508 aaKnown RBP23.02■■□□□ 1.28
PTPN11-204ENST00000531326 ECE1P42892 770 aa23.02■■□□□ 1.28
PTPN11-204ENST00000531326 GRM1Q13255 1194 aa23.02■■□□□ 1.28
PTPN11-204ENST00000531326 RIC3Q7Z5B4 369 aa23.02■■□□□ 1.28
PTPN11-204ENST00000531326 WDR63Q8IWG1 891 aa23.02■■□□□ 1.28
PTPN11-204ENST00000531326 ZC3H15Q8WU90 426 aaKnown RBP23.02■■□□□ 1.28
PTPN11-204ENST00000531326 GPR101Q96P66 508 aaPredicted RBP23.02■■□□□ 1.28
PTPN11-204ENST00000531326 IL16Q14005 1332 aa23.02■■□□□ 1.28
PTPN11-204ENST00000531326 PSMD14O00487 310 aa23.01■■□□□ 1.27
PTPN11-204ENST00000531326 RIMBP2O15034 1052 aa23.01■■□□□ 1.27
PTPN11-204ENST00000531326 GNAI1P63096 354 aa23.01■■□□□ 1.27
PTPN11-204ENST00000531326 SAPCD2Q86UD0 394 aa23.01■■□□□ 1.27
PTPN11-204ENST00000531326 MICALL2Q8IY33 904 aa23.01■■□□□ 1.27
PTPN11-204ENST00000531326 C6orf229H3BNL8 230 aa23■■□□□ 1.27
PTPN11-204ENST00000531326 RPS8P62241 208 aaKnown RBP23■■□□□ 1.27
PTPN11-204ENST00000531326 GOLGA2Q08379 1002 aa23■■□□□ 1.27
PTPN11-204ENST00000531326 ZBTB38Q8NAP3 1195 aaPredicted RBP23■■□□□ 1.27
PTPN11-204ENST00000531326 C8orf58Q8NAV2 365 aa23■■□□□ 1.27
PTPN11-204ENST00000531326 KCNQ5Q9NR82 932 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms