RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ZNRF3Q9ULT6 936 aa28.77■■■□□ 2.2
TRAPPC4-210ENST00000531290 PASKQ96RG2 1323 aa28.76■■■□□ 2.19
TRAPPC4-210ENST00000531290 ITGBL1O95965 494 aaPredicted RBP28.76■■■□□ 2.19
TRAPPC4-210ENST00000531290 IRS4O14654 1257 aaPredicted RBP28.75■■■□□ 2.19
TRAPPC4-210ENST00000531290 CNTROBQ8N137 903 aa28.75■■■□□ 2.19
TRAPPC4-210ENST00000531290 DDX58O95786 925 aaKnown RBP28.74■■■□□ 2.19
TRAPPC4-210ENST00000531290 HSP90B1P14625 803 aaKnown RBP28.74■■■□□ 2.19
TRAPPC4-210ENST00000531290 SCNN1DP51172 638 aa28.74■■■□□ 2.19
TRAPPC4-210ENST00000531290 MAP1SQ66K74 1059 aaPredicted RBP28.74■■■□□ 2.19
TRAPPC4-210ENST00000531290 MYD88Q99836 296 aa28.74■■■□□ 2.19
TRAPPC4-210ENST00000531290 MKRN1Q9UHC7 482 aaKnown RBP28.74■■■□□ 2.19
TRAPPC4-210ENST00000531290 COL4A5P29400 1685 aa28.74■■■□□ 2.19
TRAPPC4-210ENST00000531290 EPS15P42566 896 aa28.73■■■□□ 2.19
TRAPPC4-210ENST00000531290 KIAA2012Q0VF49 1180 aa28.73■■■□□ 2.19
TRAPPC4-210ENST00000531290 ZBTB38Q8NAP3 1195 aaPredicted RBP28.73■■■□□ 2.19
TRAPPC4-210ENST00000531290 SCN4AP35499 1836 aa28.72■■■□□ 2.19
TRAPPC4-210ENST00000531290 TMEM88BA6NKF7 163 aa28.72■■■□□ 2.19
TRAPPC4-210ENST00000531290 ANP32CO43423 234 aa28.72■■■□□ 2.19
TRAPPC4-210ENST00000531290 CXCL9Q07325 125 aa28.72■■■□□ 2.19
TRAPPC4-210ENST00000531290 CCDC27Q2M243 656 aa28.72■■■□□ 2.19
TRAPPC4-210ENST00000531290 CELF1Q92879 486 aaKnown RBP28.71■■■□□ 2.19
TRAPPC4-210ENST00000531290 MRS2Q9HD23 443 aa28.71■■■□□ 2.19
TRAPPC4-210ENST00000531290 ZNF316A6NFI3 1004 aaPredicted RBP28.7■■■□□ 2.18
TRAPPC4-210ENST00000531290 USP50Q70EL3 339 aaPredicted RBP28.7■■■□□ 2.18
TRAPPC4-210ENST00000531290 WWC1Q8IX03 1113 aa28.7■■■□□ 2.18
TRAPPC4-210ENST00000531290 TSPYL6Q8N831 410 aa28.7■■■□□ 2.18
TRAPPC4-210ENST00000531290 CCDC191Q8NCU4 936 aa28.7■■■□□ 2.18
TRAPPC4-210ENST00000531290 TSR2Q969E8 191 aaKnown RBP28.7■■■□□ 2.18
TRAPPC4-210ENST00000531290 NSFL1CQ9UNZ2 370 aaKnown RBP28.7■■■□□ 2.18
TRAPPC4-210ENST00000531290 CIAPIN1Q6FI81 312 aa28.69■■■□□ 2.18
TRAPPC4-210ENST00000531290 TNIP1Q15025 636 aa28.68■■■□□ 2.18
TRAPPC4-210ENST00000531290 METTL22Q9BUU2 404 aaPredicted RBP28.68■■■□□ 2.18
TRAPPC4-210ENST00000531290 STK31Q9BXU1 1019 aa28.68■■■□□ 2.18
TRAPPC4-210ENST00000531290 CWC25Q9NXE8 425 aaPredicted RBP28.68■■■□□ 2.18
TRAPPC4-210ENST00000531290 ANKRD36CQ5JPF3 1778 aa28.67■■■□□ 2.18
TRAPPC4-210ENST00000531290 HSPA1AP0DMV8 641 aaKnown RBP28.67■■■□□ 2.18
TRAPPC4-210ENST00000531290 HSPA1BP0DMV9 641 aaKnown RBP28.67■■■□□ 2.18
TRAPPC4-210ENST00000531290 RPS8P62241 208 aaKnown RBP28.67■■■□□ 2.18
TRAPPC4-210ENST00000531290 ADARB2Q9NS39 739 aaKnown RBP28.67■■■□□ 2.18
TRAPPC4-210ENST00000531290 GPRC5DQ9NZD1 345 aa28.67■■■□□ 2.18
TRAPPC4-210ENST00000531290 RAD17O75943 681 aa28.66■■■□□ 2.18
TRAPPC4-210ENST00000531290 WASHC4Q2M389 1173 aa28.66■■■□□ 2.18
TRAPPC4-210ENST00000531290 BCL2L13Q9BXK5 485 aa28.66■■■□□ 2.18
TRAPPC4-210ENST00000531290 C6orf229H3BNL8 230 aa28.65■■■□□ 2.18
TRAPPC4-210ENST00000531290 PCCAP05165 728 aaPredicted RBP28.65■■■□□ 2.18
TRAPPC4-210ENST00000531290 GMPSP49915 693 aaPredicted RBP28.65■■■□□ 2.18
TRAPPC4-210ENST00000531290 MAP3K2Q9Y2U5 619 aa28.65■■■□□ 2.18
TRAPPC4-210ENST00000531290 CNTNAP1P78357 1384 aa28.64■■■□□ 2.18
TRAPPC4-210ENST00000531290 CCDC152Q4G0S7 254 aa28.64■■■□□ 2.18
TRAPPC4-210ENST00000531290 NCBP3Q53F19 620 aaKnown RBP28.64■■■□□ 2.18
TRAPPC4-210ENST00000531290 KSR2Q6VAB6 950 aa28.64■■■□□ 2.18
TRAPPC4-210ENST00000531290 IL16Q14005 1332 aa28.64■■■□□ 2.17
TRAPPC4-210ENST00000531290 GPSM2P81274 684 aa28.63■■■□□ 2.17
TRAPPC4-210ENST00000531290 TWISTNBQ3B726 338 aaPredicted RBP28.63■■■□□ 2.17
TRAPPC4-210ENST00000531290 COL13A1Q5TAT6 717 aaPredicted RBP28.63■■■□□ 2.17
TRAPPC4-210ENST00000531290 JARID2Q92833 1246 aaPredicted RBP28.63■■■□□ 2.17
TRAPPC4-210ENST00000531290 PCNTO95613 3336 aa28.63■■■□□ 2.17
TRAPPC4-210ENST00000531290 PI4KAP2A4QPH2 592 aa28.62■■■□□ 2.17
TRAPPC4-210ENST00000531290 RIMBP2O15034 1052 aa28.62■■■□□ 2.17
TRAPPC4-210ENST00000531290 PDE8AO60658 829 aa28.62■■■□□ 2.17
TRAPPC4-210ENST00000531290 PI4KAP1Q8N8J0 262 aa28.62■■■□□ 2.17
TRAPPC4-210ENST00000531290 EYA3Q99504 573 aa28.62■■■□□ 2.17
TRAPPC4-210ENST00000531290 NEXNQ0ZGT2 675 aa28.61■■■□□ 2.17
TRAPPC4-210ENST00000531290 SEC31BQ9NQW1 1179 aa28.61■■■□□ 2.17
TRAPPC4-210ENST00000531290 POLLQ9UGP5 575 aa28.61■■■□□ 2.17
TRAPPC4-210ENST00000531290 YDJCA8MPS7 323 aa28.6■■■□□ 2.17
TRAPPC4-210ENST00000531290 ABT1Q9ULW3 272 aaKnown RBP28.6■■■□□ 2.17
TRAPPC4-210ENST00000531290 CDHR2Q9BYE9 1310 aa28.6■■■□□ 2.17
TRAPPC4-210ENST00000531290 SLC4A2P04920 1241 aa28.59■■■□□ 2.17
TRAPPC4-210ENST00000531290 VEGFBP49765 207 aa28.59■■■□□ 2.17
TRAPPC4-210ENST00000531290 DEFB115Q30KQ5 88 aa28.59■■■□□ 2.17
TRAPPC4-210ENST00000531290 SALL2Q9Y467 1007 aaPredicted RBP28.59■■■□□ 2.17
TRAPPC4-210ENST00000531290 TBC1D16Q8TBP0 767 aa28.58■■■□□ 2.17
TRAPPC4-210ENST00000531290 CCDC85AQ96PX6 553 aaPredicted RBP28.58■■■□□ 2.17
TRAPPC4-210ENST00000531290 DBNDD1Q9H9R9 158 aa28.58■■■□□ 2.17
TRAPPC4-210ENST00000531290 ANKIB1Q9P2G1 1089 aa28.58■■■□□ 2.17
TRAPPC4-210ENST00000531290 H7C1D1 291 aa28.57■■■□□ 2.16
TRAPPC4-210ENST00000531290 ZC3H12CQ9C0D7 883 aaKnown RBP28.57■■■□□ 2.16
TRAPPC4-210ENST00000531290 CNOT7Q9UIV1 285 aaKnown RBP28.57■■■□□ 2.16
TRAPPC4-210ENST00000531290 LAMB2P55268 1798 aa28.57■■■□□ 2.16
TRAPPC4-210ENST00000531290 ADAMTSL1Q8N6G6 1762 aa28.57■■■□□ 2.16
TRAPPC4-210ENST00000531290 RASSF10A6NK89 507 aa28.56■■■□□ 2.16
TRAPPC4-210ENST00000531290 IGKV5-2P06315 115 aa28.56■■■□□ 2.16
TRAPPC4-210ENST00000531290 WDR63Q8IWG1 891 aa28.56■■■□□ 2.16
TRAPPC4-210ENST00000531290 G3V3G9 751 aa28.55■■■□□ 2.16
TRAPPC4-210ENST00000531290 DOK7Q18PE1 504 aa28.55■■■□□ 2.16
TRAPPC4-210ENST00000531290 DCAF8Q5TAQ9 597 aa28.55■■■□□ 2.16
TRAPPC4-210ENST00000531290 ANKRD18AQ8IVF6 992 aa28.55■■■□□ 2.16
TRAPPC4-210ENST00000531290 PODXL2Q9NZ53 605 aa28.55■■■□□ 2.16
TRAPPC4-210ENST00000531290 LTBP1Q14766 1721 aa28.55■■■□□ 2.16
TRAPPC4-210ENST00000531290 TRAF5O00463 557 aa28.54■■■□□ 2.16
TRAPPC4-210ENST00000531290 PSMD14O00487 310 aa28.54■■■□□ 2.16
TRAPPC4-210ENST00000531290 FMR1Q06787 632 aaKnown RBP eCLIP28.54■■■□□ 2.16
TRAPPC4-210ENST00000531290 G2E3Q7L622 706 aa28.54■■■□□ 2.16
TRAPPC4-210ENST00000531290 ZC3H15Q8WU90 426 aaKnown RBP28.54■■■□□ 2.16
TRAPPC4-210ENST00000531290 GGA1Q9UJY5 639 aa28.54■■■□□ 2.16
TRAPPC4-210ENST00000531290 ZBTB12Q9Y330 459 aaPredicted RBP28.54■■■□□ 2.16
TRAPPC4-210ENST00000531290 DDX60Q8IY21 1712 aaKnown RBP28.53■■■□□ 2.16
TRAPPC4-210ENST00000531290 ECE2O60344 883 aa28.53■■■□□ 2.16
TRAPPC4-210ENST00000531290 UFL1O94874 794 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms