RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 L3MBTL3Q96JM7 780 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-221ENST00000531068 RTFDC1Q9BY42 306 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-221ENST00000531068 PDE8AO60658 829 aa14.03□□□□□ -0.16
CAPN1-221ENST00000531068 RPS8P62241 208 aaKnown RBP14.03□□□□□ -0.16
CAPN1-221ENST00000531068 FLIIQ13045 1269 aa14.03□□□□□ -0.16
CAPN1-221ENST00000531068 NIM1KQ8IY84 436 aa14.03□□□□□ -0.16
CAPN1-221ENST00000531068 GPC2Q8N158 579 aa14.03□□□□□ -0.16
CAPN1-221ENST00000531068 DLEC1Q9Y238 1755 aa14.03□□□□□ -0.16
CAPN1-221ENST00000531068 SLX4Q8IY92 1834 aa14.02□□□□□ -0.16
CAPN1-221ENST00000531068 ZNF521Q96K83 1311 aa14.02□□□□□ -0.17
CAPN1-221ENST00000531068 PPIP5K2O43314 1243 aa14.02□□□□□ -0.17
CAPN1-221ENST00000531068 CCDC152Q4G0S7 254 aa14.02□□□□□ -0.17
CAPN1-221ENST00000531068 IGKV5-2P06315 115 aa14.01□□□□□ -0.17
CAPN1-221ENST00000531068 FKBP5Q13451 457 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-221ENST00000531068 G2E3Q7L622 706 aa14.01□□□□□ -0.17
CAPN1-221ENST00000531068 PNMA8AQ86V59 439 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-221ENST00000531068 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-221ENST00000531068 HACL1Q9UJ83 578 aa14.01□□□□□ -0.17
CAPN1-221ENST00000531068 COL11A2P13942 1736 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-221ENST00000531068 SNED1Q8TER0 1413 aa14□□□□□ -0.17
CAPN1-221ENST00000531068 CDHR2Q9BYE9 1310 aa14□□□□□ -0.17
CAPN1-221ENST00000531068 ZNF541Q9H0D2 1346 aa14□□□□□ -0.17
CAPN1-221ENST00000531068 NEURL1BA8MQ27 555 aa14□□□□□ -0.17
CAPN1-221ENST00000531068 AOC3Q16853 763 aa14□□□□□ -0.17
CAPN1-221ENST00000531068 DNAAF4Q8WXU2 420 aa14□□□□□ -0.17
CAPN1-221ENST00000531068 CELF1Q92879 486 aaKnown RBP14□□□□□ -0.17
CAPN1-221ENST00000531068 ZNRF3Q9ULT6 936 aa14□□□□□ -0.17
CAPN1-221ENST00000531068 NSFL1CQ9UNZ2 370 aaKnown RBP14□□□□□ -0.17
CAPN1-221ENST00000531068 NUP98P52948 1817 aa13.99□□□□□ -0.17
CAPN1-221ENST00000531068 E9PSI1 815 aa13.99□□□□□ -0.17
CAPN1-221ENST00000531068 KIAA2012Q0VF49 1180 aa13.99□□□□□ -0.17
CAPN1-221ENST00000531068 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
CAPN1-221ENST00000531068 LINS1Q8NG48 757 aa13.99□□□□□ -0.17
CAPN1-221ENST00000531068 TAF1DQ9H5J8 278 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-221ENST00000531068 GJA3Q9Y6H8 435 aa13.99□□□□□ -0.17
CAPN1-221ENST00000531068 H7C1W4 665 aa13.98□□□□□ -0.17
CAPN1-221ENST00000531068 LMOD1P29536 600 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-221ENST00000531068 EPHX2P34913 555 aa13.98□□□□□ -0.17
CAPN1-221ENST00000531068 GCKRQ14397 625 aa13.98□□□□□ -0.17
CAPN1-221ENST00000531068 WASHC4Q2M389 1173 aa13.98□□□□□ -0.17
CAPN1-221ENST00000531068 CWF19L2Q2TBE0 894 aaKnown RBP13.98□□□□□ -0.17
CAPN1-221ENST00000531068 LDHDQ86WU2 507 aa13.98□□□□□ -0.17
CAPN1-221ENST00000531068 JARID2Q92833 1246 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-221ENST00000531068 CDC5LQ99459 802 aaKnown RBP13.98□□□□□ -0.17
CAPN1-221ENST00000531068 EYA3Q99504 573 aa13.98□□□□□ -0.17
CAPN1-221ENST00000531068 C6orf229H3BNL8 230 aa13.97□□□□□ -0.17
CAPN1-221ENST00000531068 TNIP1Q15025 636 aa13.97□□□□□ -0.17
CAPN1-221ENST00000531068 ANKRD18AQ8IVF6 992 aa13.97□□□□□ -0.17
CAPN1-221ENST00000531068 SEC31BQ9NQW1 1179 aa13.97□□□□□ -0.17
CAPN1-221ENST00000531068 TNRC6CQ9HCJ0 1690 aaKnown RBP13.96□□□□□ -0.17
CAPN1-221ENST00000531068 CTSWP56202 376 aa13.96□□□□□ -0.17
CAPN1-221ENST00000531068 EAPPQ56P03 285 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-221ENST00000531068 UBE3BQ7Z3V4 1068 aa13.96□□□□□ -0.17
CAPN1-221ENST00000531068 SLC51AQ86UW1 340 aa13.96□□□□□ -0.17
CAPN1-221ENST00000531068 TTLL11Q8NHH1 800 aa13.96□□□□□ -0.17
CAPN1-221ENST00000531068 PODXL2Q9NZ53 605 aa13.96□□□□□ -0.17
CAPN1-221ENST00000531068 ANKIB1Q9P2G1 1089 aa13.96□□□□□ -0.17
CAPN1-221ENST00000531068 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
CAPN1-221ENST00000531068 GPSM2P81274 684 aa13.95□□□□□ -0.18
CAPN1-221ENST00000531068 CXCL9Q07325 125 aa13.95□□□□□ -0.18
CAPN1-221ENST00000531068 CIAPIN1Q6FI81 312 aa13.95□□□□□ -0.18
CAPN1-221ENST00000531068 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-221ENST00000531068 PLA2G12BQ9BX93 195 aa13.95□□□□□ -0.18
CAPN1-221ENST00000531068 ZC3H12CQ9C0D7 883 aaKnown RBP13.95□□□□□ -0.18
CAPN1-221ENST00000531068 SBF1O95248 1867 aa13.95□□□□□ -0.18
CAPN1-221ENST00000531068 FER1L6Q2WGJ9 1857 aa13.95□□□□□ -0.18
CAPN1-221ENST00000531068 G3V3G9 751 aa13.94□□□□□ -0.18
CAPN1-221ENST00000531068 SLFN5Q08AF3 891 aa13.94□□□□□ -0.18
CAPN1-221ENST00000531068 BEND3Q5T5X7 828 aa13.94□□□□□ -0.18
CAPN1-221ENST00000531068 DCAF8Q5TAQ9 597 aa13.94□□□□□ -0.18
CAPN1-221ENST00000531068 DNAJC5GQ8N7S2 189 aa13.94□□□□□ -0.18
CAPN1-221ENST00000531068 TBC1D16Q8TBP0 767 aa13.94□□□□□ -0.18
CAPN1-221ENST00000531068 POLLQ9UGP5 575 aa13.94□□□□□ -0.18
CAPN1-221ENST00000531068 GGA1Q9UJY5 639 aa13.94□□□□□ -0.18
CAPN1-221ENST00000531068 RIMBP2O15034 1052 aa13.93□□□□□ -0.18
CAPN1-221ENST00000531068 POTEIP0CG38 1075 aa13.93□□□□□ -0.18
CAPN1-221ENST00000531068 POTEJP0CG39 1038 aa13.93□□□□□ -0.18
CAPN1-221ENST00000531068 USP50Q70EL3 339 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-221ENST00000531068 TRMT2AQ8IZ69 625 aaKnown RBP13.93□□□□□ -0.18
CAPN1-221ENST00000531068 BCL2L13Q9BXK5 485 aa13.93□□□□□ -0.18
CAPN1-221ENST00000531068 BSDC1Q9NW68 430 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-221ENST00000531068 F6X3S4 739 aa13.92□□□□□ -0.18
CAPN1-221ENST00000531068 ALDH1L1O75891 902 aa13.92□□□□□ -0.18
CAPN1-221ENST00000531068 RAD17O75943 681 aa13.92□□□□□ -0.18
CAPN1-221ENST00000531068 UFL1O94874 794 aa13.92□□□□□ -0.18
CAPN1-221ENST00000531068 CSF1RP07333 972 aa13.92□□□□□ -0.18
CAPN1-221ENST00000531068 ATP2B4P23634 1241 aa13.92□□□□□ -0.18
CAPN1-221ENST00000531068 IGHMBP2P38935 993 aaKnown RBP13.92□□□□□ -0.18
CAPN1-221ENST00000531068 EPS15P42566 896 aa13.92□□□□□ -0.18
CAPN1-221ENST00000531068 SCNN1DP51172 638 aa13.92□□□□□ -0.18
CAPN1-221ENST00000531068 GREM2Q9H772 168 aa13.92□□□□□ -0.18
CAPN1-221ENST00000531068 GPRC5DQ9NZD1 345 aa13.92□□□□□ -0.18
CAPN1-221ENST00000531068 RTL9Q8NET4 1388 aa13.92□□□□□ -0.18
CAPN1-221ENST00000531068 XDHP47989 1333 aa13.91□□□□□ -0.18
CAPN1-221ENST00000531068 ARFGEF2Q9Y6D5 1785 aa13.91□□□□□ -0.18
CAPN1-221ENST00000531068 WDR90Q96KV7 1748 aa13.91□□□□□ -0.18
CAPN1-221ENST00000531068 CASP7P55210 303 aa13.91□□□□□ -0.18
CAPN1-221ENST00000531068 CNTROBQ8N137 903 aa13.91□□□□□ -0.18
CAPN1-221ENST00000531068 KLRG1Q96E93 195 aa13.91□□□□□ -0.18
CAPN1-221ENST00000531068 SRCIN1Q9C0H9 1055 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms