RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 MIER1Q8N108 512 aa24.29■■□□□ 1.48
UBXN1-211ENST00000531056 CDHR2Q9BYE9 1310 aa24.29■■□□□ 1.48
UBXN1-211ENST00000531056 MYH3P11055 1940 aa24.28■■□□□ 1.48
UBXN1-211ENST00000531056 NEURL1BA8MQ27 555 aa24.28■■□□□ 1.48
UBXN1-211ENST00000531056 CWF19L2Q2TBE0 894 aaKnown RBP24.28■■□□□ 1.48
UBXN1-211ENST00000531056 SP8Q8IXZ3 490 aa24.27■■□□□ 1.48
UBXN1-211ENST00000531056 DNAAF4Q8WXU2 420 aa24.27■■□□□ 1.48
UBXN1-211ENST00000531056 JARID2Q92833 1246 aaPredicted RBP24.27■■□□□ 1.48
UBXN1-211ENST00000531056 RRAGCQ9HB90 399 aa24.27■■□□□ 1.48
UBXN1-211ENST00000531056 DUOX1Q9NRD9 1551 aa24.26■■□□□ 1.47
UBXN1-211ENST00000531056 PDE8AO60658 829 aa24.26■■□□□ 1.47
UBXN1-211ENST00000531056 HSP90B1P14625 803 aaKnown RBP24.26■■□□□ 1.47
UBXN1-211ENST00000531056 LTBP1Q14766 1721 aa24.25■■□□□ 1.47
UBXN1-211ENST00000531056 DPY19L2Q6NUT2 758 aa24.25■■□□□ 1.47
UBXN1-211ENST00000531056 TMC4Q7Z404 712 aa24.25■■□□□ 1.47
UBXN1-211ENST00000531056 CELF1Q92879 486 aaKnown RBP24.25■■□□□ 1.47
UBXN1-211ENST00000531056 CDCA7LQ96GN5 454 aa24.25■■□□□ 1.47
UBXN1-211ENST00000531056 TOMM70O94826 608 aa24.24■■□□□ 1.47
UBXN1-211ENST00000531056 TRMT2AQ8IZ69 625 aaKnown RBP24.24■■□□□ 1.47
UBXN1-211ENST00000531056 RTFDC1Q9BY42 306 aaPredicted RBP24.24■■□□□ 1.47
UBXN1-211ENST00000531056 POTECB2RU33 542 aa24.23■■□□□ 1.47
UBXN1-211ENST00000531056 LINS1Q8NG48 757 aa24.23■■□□□ 1.47
UBXN1-211ENST00000531056 TMX4Q9H1E5 349 aaPredicted RBP24.23■■□□□ 1.47
UBXN1-211ENST00000531056 ZNF541Q9H0D2 1346 aa24.23■■□□□ 1.47
UBXN1-211ENST00000531056 F6X3S4 739 aa24.22■■□□□ 1.47
UBXN1-211ENST00000531056 H7C1W4 665 aa24.22■■□□□ 1.47
UBXN1-211ENST00000531056 FZD9O00144 591 aa24.22■■□□□ 1.47
UBXN1-211ENST00000531056 GCKRQ14397 625 aa24.22■■□□□ 1.47
UBXN1-211ENST00000531056 DDNO94850 711 aaPredicted RBP24.21■■□□□ 1.47
UBXN1-211ENST00000531056 CCDC152Q4G0S7 254 aa24.21■■□□□ 1.47
UBXN1-211ENST00000531056 SEC31BQ9NQW1 1179 aa24.21■■□□□ 1.47
UBXN1-211ENST00000531056 VEGFAP15692 232 aaPredicted RBP24.2■■□□□ 1.46
UBXN1-211ENST00000531056 CASP7P55210 303 aa24.2■■□□□ 1.46
UBXN1-211ENST00000531056 CTSWP56202 376 aa24.2■■□□□ 1.46
UBXN1-211ENST00000531056 DPP8Q6V1X1 898 aaPredicted RBP24.2■■□□□ 1.46
UBXN1-211ENST00000531056 UBE3BQ7Z3V4 1068 aa24.2■■□□□ 1.46
UBXN1-211ENST00000531056 MPNDQ8N594 471 aa24.2■■□□□ 1.46
UBXN1-211ENST00000531056 RBM46Q8TBY0 533 aaKnown RBP24.2■■□□□ 1.46
UBXN1-211ENST00000531056 SCN4AP35499 1836 aa24.19■■□□□ 1.46
UBXN1-211ENST00000531056 BEND3Q5T5X7 828 aa24.19■■□□□ 1.46
UBXN1-211ENST00000531056 C16orf71Q8IYS4 520 aaPredicted RBP24.19■■□□□ 1.46
UBXN1-211ENST00000531056 MRPL50Q8N5N7 158 aaKnown RBP24.19■■□□□ 1.46
UBXN1-211ENST00000531056 SUPT20HQ8NEM7 779 aa24.19■■□□□ 1.46
UBXN1-211ENST00000531056 JDP2Q8WYK2 163 aa24.19■■□□□ 1.46
UBXN1-211ENST00000531056 VPS33BQ9H267 617 aa24.19■■□□□ 1.46
UBXN1-211ENST00000531056 RPS8P62241 208 aaKnown RBP24.18■■□□□ 1.46
UBXN1-211ENST00000531056 AOC3Q16853 763 aa24.18■■□□□ 1.46
UBXN1-211ENST00000531056 LARGE2Q8N3Y3 721 aa24.18■■□□□ 1.46
UBXN1-211ENST00000531056 L3MBTL3Q96JM7 780 aaPredicted RBP24.18■■□□□ 1.46
UBXN1-211ENST00000531056 PLA2G12BQ9BX93 195 aa24.18■■□□□ 1.46
UBXN1-211ENST00000531056 SPEF2Q9C093 1822 aa24.18■■□□□ 1.46
UBXN1-211ENST00000531056 RTL9Q8NET4 1388 aa24.17■■□□□ 1.46
UBXN1-211ENST00000531056 PPIP5K2O43314 1243 aa24.17■■□□□ 1.46
UBXN1-211ENST00000531056 TTLL11Q8NHH1 800 aa24.17■■□□□ 1.46
UBXN1-211ENST00000531056 CCDC85AQ96PX6 553 aaPredicted RBP24.17■■□□□ 1.46
UBXN1-211ENST00000531056 SSH1Q8WYL5 1049 aa24.16■■□□□ 1.46
UBXN1-211ENST00000531056 KIAA2012Q0VF49 1180 aa24.15■■□□□ 1.46
UBXN1-211ENST00000531056 HSPA6P17066 643 aa24.14■■□□□ 1.45
UBXN1-211ENST00000531056 GPSM2P81274 684 aa24.14■■□□□ 1.45
UBXN1-211ENST00000531056 NIM1KQ8IY84 436 aa24.14■■□□□ 1.45
UBXN1-211ENST00000531056 GREM2Q9H772 168 aa24.14■■□□□ 1.45
UBXN1-211ENST00000531056 EIF6P56537 245 aaKnown RBP24.13■■□□□ 1.45
UBXN1-211ENST00000531056 FSTL1Q12841 308 aa24.13■■□□□ 1.45
UBXN1-211ENST00000531056 ALDH1L2Q3SY69 923 aa24.13■■□□□ 1.45
UBXN1-211ENST00000531056 GPC2Q8N158 579 aa24.13■■□□□ 1.45
UBXN1-211ENST00000531056 PTPRCP08575 1304 aa24.12■■□□□ 1.45
UBXN1-211ENST00000531056 CT47B1P0C2W7 299 aaPredicted RBP24.12■■□□□ 1.45
UBXN1-211ENST00000531056 ANKRD18AQ8IVF6 992 aa24.12■■□□□ 1.45
UBXN1-211ENST00000531056 NSFL1CQ9UNZ2 370 aaKnown RBP24.12■■□□□ 1.45
UBXN1-211ENST00000531056 ALDH1L1O75891 902 aa24.11■■□□□ 1.45
UBXN1-211ENST00000531056 CDC5LQ99459 802 aaKnown RBP24.11■■□□□ 1.45
UBXN1-211ENST00000531056 BCL2L13Q9BXK5 485 aa24.11■■□□□ 1.45
UBXN1-211ENST00000531056 PODXL2Q9NZ53 605 aa24.11■■□□□ 1.45
UBXN1-211ENST00000531056 POLLQ9UGP5 575 aa24.11■■□□□ 1.45
UBXN1-211ENST00000531056 ADAMTSL1Q8N6G6 1762 aa24.11■■□□□ 1.45
UBXN1-211ENST00000531056 IQCA1LA6NCM1 817 aa24.1■■□□□ 1.45
UBXN1-211ENST00000531056 CSF1RP07333 972 aa24.1■■□□□ 1.45
UBXN1-211ENST00000531056 SLC4A10Q6U841 1118 aa24.1■■□□□ 1.45
UBXN1-211ENST00000531056 SMC1BQ8NDV3 1235 aa24.1■■□□□ 1.45
UBXN1-211ENST00000531056 TBC1D16Q8TBP0 767 aa24.09■■□□□ 1.45
UBXN1-211ENST00000531056 SRCIN1Q9C0H9 1055 aa24.09■■□□□ 1.45
UBXN1-211ENST00000531056 ZNRF3Q9ULT6 936 aa24.09■■□□□ 1.45
UBXN1-211ENST00000531056 GRM8O00222 908 aa24.08■■□□□ 1.45
UBXN1-211ENST00000531056 FOXO4P98177 505 aa24.08■■□□□ 1.45
UBXN1-211ENST00000531056 FAM161AQ3B820 660 aa24.08■■□□□ 1.45
UBXN1-211ENST00000531056 TAF1DQ9H5J8 278 aaPredicted RBP24.08■■□□□ 1.45
UBXN1-211ENST00000531056 WASHC4Q2M389 1173 aa24.07■■□□□ 1.44
UBXN1-211ENST00000531056 SMC4Q9NTJ3 1288 aa24.07■■□□□ 1.44
UBXN1-211ENST00000531056 BSDC1Q9NW68 430 aaPredicted RBP24.07■■□□□ 1.44
UBXN1-211ENST00000531056 HACL1Q9UJ83 578 aa24.07■■□□□ 1.44
UBXN1-211ENST00000531056 GJA3Q9Y6H8 435 aa24.07■■□□□ 1.44
UBXN1-211ENST00000531056 YDJCA8MPS7 323 aa24.06■■□□□ 1.44
UBXN1-211ENST00000531056 C6orf229H3BNL8 230 aa24.06■■□□□ 1.44
UBXN1-211ENST00000531056 POTEIP0CG38 1075 aa24.06■■□□□ 1.44
UBXN1-211ENST00000531056 POTEJP0CG39 1038 aa24.06■■□□□ 1.44
UBXN1-211ENST00000531056 ITGA6P23229 1130 aa24.06■■□□□ 1.44
UBXN1-211ENST00000531056 CXCL9Q07325 125 aa24.06■■□□□ 1.44
UBXN1-211ENST00000531056 A0A1B0GUL6 1792 aa24.06■■□□□ 1.44
UBXN1-211ENST00000531056 SCNN1DP51172 638 aa24.05■■□□□ 1.44
UBXN1-211ENST00000531056 HNRNPUQ00839 825 aaKnown RBP eCLIP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms