RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 EXOC1Q9NV70 894 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 TMCO5BA8MYB1 307 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 MYO1BO43795 1136 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 KIF21AQ7Z4S6 1674 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 PRAG1Q86YV5 1406 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 GOLGA6L10A0A0M3HER8 536 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 URI1O94763 535 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-221ENST00000529873 IGHDP01880 384 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 TSPY3P0CV98 308 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 TSPY8P0CW00 308 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 SETSIPP0DME0 302 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 CHMP4BP1P59074 171 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 WTAPQ15007 396 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 RHPN1Q8TCX5 695 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 ORC3Q9UBD5 711 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-221ENST00000529873 ZHX1Q9UKY1 873 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-221ENST00000529873 ASXL2Q76L83 1435 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 IFFO1Q0D2I5 559 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 MICALCLQ6ZW33 695 aa9.75□□□□□ -0.85
CTNND1-221ENST00000529873 LIG1P18858 919 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 PAFAH1B1P43034 410 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 HAND2P61296 217 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 NBPF6Q5VWK0 638 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 CADPS2Q86UW7 1296 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 NBPF5PQ86XG9 351 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-221ENST00000529873 NBPF4Q96M43 638 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 MRVI1Q9Y6F6 885 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 ALDH1L1O75891 902 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 CPLX3Q8WVH0 158 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 CTNNBL1Q8WYA6 563 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-221ENST00000529873 FEZ1Q99689 392 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 NAA15Q9BXJ9 866 aaKnown RBP9.74□□□□□ -0.85
CTNND1-221ENST00000529873 VAT1LQ9HCJ6 419 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 SLC4A4Q9Y6R1 1079 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 ZSCAN22P10073 491 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-221ENST00000529873 TAOK3Q9H2K8 898 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 IFIT1BQ5T764 474 aaKnown RBP9.74□□□□□ -0.85
CTNND1-221ENST00000529873 MICU3Q86XE3 530 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 TBC1D32Q96NH3 1257 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 CCDC113Q9H0I3 377 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 TMX1Q9H3N1 280 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 SNRKQ9NRH2 765 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 TCOF1Q13428 1488 aaKnown RBP9.74□□□□□ -0.85
CTNND1-221ENST00000529873 BMP15O95972 392 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 TNNT1P13805 278 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 SYCP3Q8IZU3 236 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 ERMNQ8TAM6 284 aa9.74□□□□□ -0.85
CTNND1-221ENST00000529873 RTL9Q8NET4 1388 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 ZNF804AQ7Z570 1209 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 SKAP1Q86WV1 359 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 TMTC2Q8N394 836 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 ADCY5O95622 1261 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 ADAMTS12P58397 1594 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 SLC4A8Q2Y0W8 1093 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 MCMDC2Q4G0Z9 681 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 TSHZ3Q63HK5 1081 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 CCDC102BQ68D86 513 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 NYXQ9GZU5 481 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 USP25Q9UHP3 1055 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 TBCAO75347 108 aaKnown RBP9.73□□□□□ -0.85
CTNND1-221ENST00000529873 TICAM2Q86XR7 235 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.73□□□□□ -0.854e-9■□□□□ 9.9
CTNND1-221ENST00000529873 CAVIN2O95810 425 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
CTNND1-221ENST00000529873 UTP14AQ9BVJ6 771 aaKnown RBP9.73□□□□□ -0.85
CTNND1-221ENST00000529873 TRPM2O94759 1503 aa9.73□□□□□ -0.85
CTNND1-221ENST00000529873 KLF18A0A0U1RQI7 1052 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 CYP7A1P22680 504 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 ATP8B2P98198 1209 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 HDAC9Q9UKV0 1011 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 MAPKBP1O60336 1514 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 BIN1O00499 593 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 ZSCAN23Q3MJ62 389 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 XAGE3Q8WTP9 111 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 CTAGE1Q96RT6 745 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 ATP10BO94823 1461 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 ERICH4A6NGS2 130 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 WDR78Q5VTH9 848 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 EHBP1Q8NDI1 1231 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 SETDB2Q96T68 719 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 MAP3K5Q99683 1374 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 CCDC172P0C7W6 258 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 SDSP20132 328 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 CTNNA2P26232 953 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 CHRNA2Q15822 529 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 JARID2Q92833 1246 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-221ENST00000529873 SAMM50Q9Y512 469 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 MAST1Q9Y2H9 1570 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 GSTTP1A0A1W2PQM5 241 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 ZBTB43O43298 467 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 PRC1O43663 620 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 RTN1Q16799 776 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 KSR2Q6VAB6 950 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 RAB11FIP4Q86YS3 637 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 TBC1D5Q92609 795 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 ESR2Q92731 530 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 SMARCC1Q92922 1105 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-221ENST00000529873 BICD1Q96G01 975 aa9.72□□□□□ -0.85
CTNND1-221ENST00000529873 ESYT1Q9BSJ8 1104 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms