RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 SF3B3Q15393 1217 aaKnown RBP20.9■□□□□ 0.94
TRIM3-209ENST00000529529 PASKQ96RG2 1323 aa20.89■□□□□ 0.93
TRIM3-209ENST00000529529 IRS4O14654 1257 aaPredicted RBP20.89■□□□□ 0.93
TRIM3-209ENST00000529529 CNTROBQ8N137 903 aa20.89■□□□□ 0.93
TRIM3-209ENST00000529529 CHMP4AQ9BY43 222 aa20.89■□□□□ 0.93
TRIM3-209ENST00000529529 MKRN1Q9UHC7 482 aaKnown RBP20.89■□□□□ 0.93
TRIM3-209ENST00000529529 ZNRF3Q9ULT6 936 aa20.89■□□□□ 0.93
TRIM3-209ENST00000529529 EPS15P42566 896 aa20.88■□□□□ 0.93
TRIM3-209ENST00000529529 CCDC30Q5VVM6 783 aa20.88■□□□□ 0.93
TRIM3-209ENST00000529529 MAP1SQ66K74 1059 aaPredicted RBP20.88■□□□□ 0.93
TRIM3-209ENST00000529529 TMC4Q7Z404 712 aa20.88■□□□□ 0.93
TRIM3-209ENST00000529529 TSPYL6Q8N831 410 aa20.88■□□□□ 0.93
TRIM3-209ENST00000529529 MYD88Q99836 296 aa20.88■□□□□ 0.93
TRIM3-209ENST00000529529 ZNF316A6NFI3 1004 aaPredicted RBP20.87■□□□□ 0.93
TRIM3-209ENST00000529529 SCNN1DP51172 638 aa20.87■□□□□ 0.93
TRIM3-209ENST00000529529 CXCL9Q07325 125 aa20.87■□□□□ 0.93
TRIM3-209ENST00000529529 CELF1Q92879 486 aaKnown RBP20.87■□□□□ 0.93
TRIM3-209ENST00000529529 TSR2Q969E8 191 aaKnown RBP20.87■□□□□ 0.93
TRIM3-209ENST00000529529 KIAA2012Q0VF49 1180 aa20.86■□□□□ 0.93
TRIM3-209ENST00000529529 CCDC27Q2M243 656 aa20.86■□□□□ 0.93
TRIM3-209ENST00000529529 WWC1Q8IX03 1113 aa20.86■□□□□ 0.93
TRIM3-209ENST00000529529 ZBTB38Q8NAP3 1195 aaPredicted RBP20.86■□□□□ 0.93
TRIM3-209ENST00000529529 MRS2Q9HD23 443 aa20.86■□□□□ 0.93
TRIM3-209ENST00000529529 TMEM88BA6NKF7 163 aa20.85■□□□□ 0.93
TRIM3-209ENST00000529529 ANP32CO43423 234 aa20.85■□□□□ 0.93
TRIM3-209ENST00000529529 DDX58O95786 925 aaKnown RBP20.85■□□□□ 0.93
TRIM3-209ENST00000529529 NSFL1CQ9UNZ2 370 aaKnown RBP20.85■□□□□ 0.93
TRIM3-209ENST00000529529 CCDC191Q8NCU4 936 aa20.84■□□□□ 0.93
TRIM3-209ENST00000529529 JARID2Q92833 1246 aaPredicted RBP20.84■□□□□ 0.93
TRIM3-209ENST00000529529 METTL22Q9BUU2 404 aaPredicted RBP20.84■□□□□ 0.93
TRIM3-209ENST00000529529 LAMB2P55268 1798 aa20.84■□□□□ 0.93
TRIM3-209ENST00000529529 RAD17O75943 681 aa20.83■□□□□ 0.93
TRIM3-209ENST00000529529 HSP90B1P14625 803 aaKnown RBP20.83■□□□□ 0.93
TRIM3-209ENST00000529529 RPS8P62241 208 aaKnown RBP20.83■□□□□ 0.93
TRIM3-209ENST00000529529 CIAPIN1Q6FI81 312 aa20.83■□□□□ 0.93
TRIM3-209ENST00000529529 USP50Q70EL3 339 aaPredicted RBP20.83■□□□□ 0.93
TRIM3-209ENST00000529529 CWC25Q9NXE8 425 aaPredicted RBP20.83■□□□□ 0.93
TRIM3-209ENST00000529529 GPRC5DQ9NZD1 345 aa20.83■□□□□ 0.93
TRIM3-209ENST00000529529 TNIP1Q15025 636 aa20.82■□□□□ 0.92
TRIM3-209ENST00000529529 MAP3K2Q9Y2U5 619 aa20.82■□□□□ 0.92
TRIM3-209ENST00000529529 C6orf229H3BNL8 230 aa20.81■□□□□ 0.92
TRIM3-209ENST00000529529 RIMBP2O15034 1052 aa20.81■□□□□ 0.92
TRIM3-209ENST00000529529 PCCAP05165 728 aaPredicted RBP20.81■□□□□ 0.92
TRIM3-209ENST00000529529 HSPA1AP0DMV8 641 aaKnown RBP20.81■□□□□ 0.92
TRIM3-209ENST00000529529 HSPA1BP0DMV9 641 aaKnown RBP20.81■□□□□ 0.92
TRIM3-209ENST00000529529 GMPSP49915 693 aaPredicted RBP20.81■□□□□ 0.92
TRIM3-209ENST00000529529 GPSM2P81274 684 aa20.81■□□□□ 0.92
TRIM3-209ENST00000529529 WASHC4Q2M389 1173 aa20.81■□□□□ 0.92
TRIM3-209ENST00000529529 COL13A1Q5TAT6 717 aaPredicted RBP20.81■□□□□ 0.92
TRIM3-209ENST00000529529 KSR2Q6VAB6 950 aa20.81■□□□□ 0.92
TRIM3-209ENST00000529529 BCL2L13Q9BXK5 485 aa20.81■□□□□ 0.92
TRIM3-209ENST00000529529 STK31Q9BXU1 1019 aa20.81■□□□□ 0.92
TRIM3-209ENST00000529529 SEC31BQ9NQW1 1179 aa20.81■□□□□ 0.92
TRIM3-209ENST00000529529 SALL2Q9Y467 1007 aaPredicted RBP20.81■□□□□ 0.92
TRIM3-209ENST00000529529 TWISTNBQ3B726 338 aaPredicted RBP20.8■□□□□ 0.92
TRIM3-209ENST00000529529 ADARB2Q9NS39 739 aaKnown RBP20.8■□□□□ 0.92
TRIM3-209ENST00000529529 POLLQ9UGP5 575 aa20.8■□□□□ 0.92
TRIM3-209ENST00000529529 TAF1P21675 1872 aa20.79■□□□□ 0.92
TRIM3-209ENST00000529529 DDX60Q8IY21 1712 aaKnown RBP20.79■□□□□ 0.92
TRIM3-209ENST00000529529 PI4KAP2A4QPH2 592 aa20.79■□□□□ 0.92
TRIM3-209ENST00000529529 YDJCA8MPS7 323 aa20.79■□□□□ 0.92
TRIM3-209ENST00000529529 PDE8AO60658 829 aa20.79■□□□□ 0.92
TRIM3-209ENST00000529529 NCBP3Q53F19 620 aaKnown RBP20.79■□□□□ 0.92
TRIM3-209ENST00000529529 PI4KAP1Q8N8J0 262 aa20.79■□□□□ 0.92
TRIM3-209ENST00000529529 CNTNAP1P78357 1384 aa20.79■□□□□ 0.92
TRIM3-209ENST00000529529 ADAMTSL1Q8N6G6 1762 aa20.79■□□□□ 0.92
TRIM3-209ENST00000529529 IL16Q14005 1332 aa20.78■□□□□ 0.92
TRIM3-209ENST00000529529 LTBP1Q14766 1721 aa20.78■□□□□ 0.92
TRIM3-209ENST00000529529 SLC4A2P04920 1241 aa20.78■□□□□ 0.92
TRIM3-209ENST00000529529 VEGFBP49765 207 aa20.78■□□□□ 0.92
TRIM3-209ENST00000529529 CCDC152Q4G0S7 254 aa20.78■□□□□ 0.92
TRIM3-209ENST00000529529 CCDC85AQ96PX6 553 aaPredicted RBP20.78■□□□□ 0.92
TRIM3-209ENST00000529529 FMR1Q06787 632 aaKnown RBP eCLIP20.77■□□□□ 0.92
TRIM3-209ENST00000529529 NEXNQ0ZGT2 675 aa20.77■□□□□ 0.92
TRIM3-209ENST00000529529 DEFB115Q30KQ5 88 aa20.77■□□□□ 0.92
TRIM3-209ENST00000529529 G2E3Q7L622 706 aa20.77■□□□□ 0.92
TRIM3-209ENST00000529529 TBC1D16Q8TBP0 767 aa20.77■□□□□ 0.92
TRIM3-209ENST00000529529 EYA3Q99504 573 aa20.77■□□□□ 0.92
TRIM3-209ENST00000529529 DBNDD1Q9H9R9 158 aa20.77■□□□□ 0.92
TRIM3-209ENST00000529529 IGKV5-2P06315 115 aa20.76■□□□□ 0.91
TRIM3-209ENST00000529529 DOK7Q18PE1 504 aa20.76■□□□□ 0.91
TRIM3-209ENST00000529529 CNOT7Q9UIV1 285 aaKnown RBP20.76■□□□□ 0.91
TRIM3-209ENST00000529529 TRAF5O00463 557 aa20.75■□□□□ 0.91
TRIM3-209ENST00000529529 GPR101Q96P66 508 aaPredicted RBP20.75■□□□□ 0.91
TRIM3-209ENST00000529529 ZC3H12CQ9C0D7 883 aaKnown RBP20.75■□□□□ 0.91
TRIM3-209ENST00000529529 ANKIB1Q9P2G1 1089 aa20.75■□□□□ 0.91
TRIM3-209ENST00000529529 ABT1Q9ULW3 272 aaKnown RBP20.75■□□□□ 0.91
TRIM3-209ENST00000529529 COL4A1P02462 1669 aa20.74■□□□□ 0.91
TRIM3-209ENST00000529529 H7C1D1 291 aa20.74■□□□□ 0.91
TRIM3-209ENST00000529529 WDR63Q8IWG1 891 aa20.74■□□□□ 0.91
TRIM3-209ENST00000529529 KCNQ5Q9NR82 932 aa20.74■□□□□ 0.91
TRIM3-209ENST00000529529 DUOX1Q9NRD9 1551 aa20.74■□□□□ 0.91
TRIM3-209ENST00000529529 ZBTB12Q9Y330 459 aaPredicted RBP20.74■□□□□ 0.91
TRIM3-209ENST00000529529 CDHR2Q9BYE9 1310 aa20.74■□□□□ 0.91
TRIM3-209ENST00000529529 RASSF10A6NK89 507 aa20.73■□□□□ 0.91
TRIM3-209ENST00000529529 PSMD14O00487 310 aa20.73■□□□□ 0.91
TRIM3-209ENST00000529529 HIRAP54198 1017 aaPredicted RBP20.73■□□□□ 0.91
TRIM3-209ENST00000529529 CWF19L2Q2TBE0 894 aaKnown RBP20.73■□□□□ 0.91
TRIM3-209ENST00000529529 PODXL2Q9NZ53 605 aa20.73■□□□□ 0.91
TRIM3-209ENST00000529529 PCNTO95613 3336 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms