RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 TMEM63CQ9P1W3 806 aa8.48□□□□□ -1.05
CTR9-204ENST00000529355 PRR12Q9ULL5 1215 aa8.48□□□□□ -1.05
CTR9-204ENST00000529355 NEURL1BA8MQ27 555 aa8.47□□□□□ -1.05
CTR9-204ENST00000529355 IGHA2P01877 340 aa8.47□□□□□ -1.05
CTR9-204ENST00000529355 EPB42P16452 691 aa8.47□□□□□ -1.05
CTR9-204ENST00000529355 SRSF11Q05519 484 aaKnown RBP8.47□□□□□ -1.05
CTR9-204ENST00000529355 FCHSD1Q86WN1 690 aa8.47□□□□□ -1.05
CTR9-204ENST00000529355 IGFLR1Q9H665 355 aa8.47□□□□□ -1.05
CTR9-204ENST00000529355 GGA1Q9UJY5 639 aa8.47□□□□□ -1.05
CTR9-204ENST00000529355 BRPF3Q9ULD4 1205 aa8.47□□□□□ -1.05
CTR9-204ENST00000529355 ZBTB7CA1YPR0 619 aa8.46□□□□□ -1.06
CTR9-204ENST00000529355 PATL2C9JE40 543 aaKnown RBP8.46□□□□□ -1.06
CTR9-204ENST00000529355 EGFRP00533 1210 aa8.46□□□□□ -1.06
CTR9-204ENST00000529355 CYP2E1P05181 493 aaPredicted RBP8.46□□□□□ -1.06
CTR9-204ENST00000529355 ZNF468Q5VIY5 522 aaPredicted RBP8.46□□□□□ -1.06
CTR9-204ENST00000529355 GJD3Q8N144 294 aa8.46□□□□□ -1.06
CTR9-204ENST00000529355 CNTN3Q9P232 1028 aa8.46□□□□□ -1.06
CTR9-204ENST00000529355 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.46□□□□□ -1.06
CTR9-204ENST00000529355 ZBTB42B2RXF5 422 aa8.45□□□□□ -1.06
CTR9-204ENST00000529355 MSTNO14793 375 aa8.45□□□□□ -1.06
CTR9-204ENST00000529355 MMP20O60882 483 aa8.45□□□□□ -1.06
CTR9-204ENST00000529355 SLURP2P0DP57 97 aa8.45□□□□□ -1.06
CTR9-204ENST00000529355 MAPK1P28482 360 aa8.45□□□□□ -1.06
CTR9-204ENST00000529355 FOXD3Q9UJU5 478 aaPredicted RBP8.45□□□□□ -1.06
CTR9-204ENST00000529355 GPR182O15218 404 aa8.44□□□□□ -1.06
CTR9-204ENST00000529355 RARAP10276 462 aa8.44□□□□□ -1.06
CTR9-204ENST00000529355 MAP2K3P46734 347 aa8.44□□□□□ -1.06
CTR9-204ENST00000529355 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
CTR9-204ENST00000529355 TBC1D8BQ0IIM8 1120 aa8.44□□□□□ -1.06
CTR9-204ENST00000529355 COL13A1Q5TAT6 717 aaPredicted RBP8.44□□□□□ -1.06
CTR9-204ENST00000529355 TMC7Q7Z402 723 aa8.44□□□□□ -1.06
CTR9-204ENST00000529355 SVOPQ8N4V2 548 aa8.44□□□□□ -1.06
CTR9-204ENST00000529355 PNMA5Q96PV4 448 aa8.44□□□□□ -1.06
CTR9-204ENST00000529355 OXCT2Q9BYC2 517 aaPredicted RBP8.44□□□□□ -1.06
CTR9-204ENST00000529355 ELP3Q9H9T3 547 aa8.44□□□□□ -1.06
CTR9-204ENST00000529355 FAM13BQ9NYF5 915 aa8.44□□□□□ -1.06
CTR9-204ENST00000529355 DCTN4Q9UJW0 460 aa8.44□□□□□ -1.06
CTR9-204ENST00000529355 CELA2BP08218 269 aaPredicted RBP8.43□□□□□ -1.06
CTR9-204ENST00000529355 ARAFP10398 606 aa8.43□□□□□ -1.06
CTR9-204ENST00000529355 MARSP56192 900 aaKnown RBP8.43□□□□□ -1.06
CTR9-204ENST00000529355 ZNF385CQ66K41 422 aaPredicted RBP8.43□□□□□ -1.06
CTR9-204ENST00000529355 HFE2Q6ZVN8 426 aa8.43□□□□□ -1.06
CTR9-204ENST00000529355 NLRP13Q86W25 1043 aa8.43□□□□□ -1.06
CTR9-204ENST00000529355 C1orf127Q8N9H9 656 aa8.43□□□□□ -1.06
CTR9-204ENST00000529355 SCARF2Q96GP6 870 aaPredicted RBP8.43□□□□□ -1.06
CTR9-204ENST00000529355 SHISA8B8ZZ34 492 aa8.42□□□□□ -1.06
CTR9-204ENST00000529355 NDUFB5O43674 189 aa8.42□□□□□ -1.06
CTR9-204ENST00000529355 ZNF438Q7Z4V0 828 aa8.42□□□□□ -1.06
CTR9-204ENST00000529355 TMC1Q8TDI8 760 aa8.42□□□□□ -1.06
CTR9-204ENST00000529355 FAM129BQ96TA1 746 aa8.42□□□□□ -1.06
CTR9-204ENST00000529355 MDFIQ99750 246 aa8.42□□□□□ -1.06
CTR9-204ENST00000529355 NIF3L1Q9GZT8 377 aa8.42□□□□□ -1.06
CTR9-204ENST00000529355 CHRDQ9H2X0 955 aa8.42□□□□□ -1.06
CTR9-204ENST00000529355 J3QW42 95 aa8.41□□□□□ -1.06
CTR9-204ENST00000529355 ORC1Q13415 861 aa8.41□□□□□ -1.06
CTR9-204ENST00000529355 USPL1Q5W0Q7 1092 aa8.41□□□□□ -1.06
CTR9-204ENST00000529355 DHX32Q7L7V1 743 aaKnown RBP8.41□□□□□ -1.06
CTR9-204ENST00000529355 Q8N3U1 123 aa8.41□□□□□ -1.06
CTR9-204ENST00000529355 RBCK1Q9BYM8 510 aa8.41□□□□□ -1.06
CTR9-204ENST00000529355 DNAJB12Q9NXW2 375 aaKnown RBP8.41□□□□□ -1.06
CTR9-204ENST00000529355 NSFL1CQ9UNZ2 370 aaKnown RBP8.41□□□□□ -1.06
CTR9-204ENST00000529355 SIN3BO75182 1162 aa8.4□□□□□ -1.06
CTR9-204ENST00000529355 TNFRSF21O75509 655 aa8.4□□□□□ -1.06
CTR9-204ENST00000529355 ADH6P28332 368 aa8.4□□□□□ -1.06
CTR9-204ENST00000529355 XKR5Q6UX68 686 aa8.4□□□□□ -1.06
CTR9-204ENST00000529355 GALNT6Q8NCL4 622 aa8.4□□□□□ -1.06
CTR9-204ENST00000529355 NSUN5Q96P11 429 aaKnown RBP8.4□□□□□ -1.06
CTR9-204ENST00000529355 UBE2OQ9C0C9 1292 aaKnown RBP8.4□□□□□ -1.06
CTR9-204ENST00000529355 ABI2Q9NYB9 513 aaPredicted RBP8.4□□□□□ -1.06
CTR9-204ENST00000529355 TLR7Q9NYK1 1049 aaKnown RBP8.4□□□□□ -1.06
CTR9-204ENST00000529355 KANSL3Q9P2N6 904 aa8.4□□□□□ -1.06
CTR9-204ENST00000529355 FNDC3AQ9Y2H6 1198 aaKnown RBP8.4□□□□□ -1.06
CTR9-204ENST00000529355 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
CTR9-204ENST00000529355 EPXP11678 715 aa8.39□□□□□ -1.07
CTR9-204ENST00000529355 ACPPP15309 386 aa8.39□□□□□ -1.07
CTR9-204ENST00000529355 PCSK2P16519 638 aa8.39□□□□□ -1.07
CTR9-204ENST00000529355 PLAURQ03405 335 aa8.39□□□□□ -1.07
CTR9-204ENST00000529355 PDE12Q6L8Q7 609 aaKnown RBP8.39□□□□□ -1.07
CTR9-204ENST00000529355 DNAJC14Q6Y2X3 702 aaPredicted RBP8.39□□□□□ -1.07
CTR9-204ENST00000529355 EDARADDQ8WWZ3 215 aa8.39□□□□□ -1.07
CTR9-204ENST00000529355 SETDB2Q96T68 719 aa8.39□□□□□ -1.07
CTR9-204ENST00000529355 C11orf16Q9NQ32 467 aa8.39□□□□□ -1.07
CTR9-204ENST00000529355 NAGPAQ9UK23 515 aa8.39□□□□□ -1.07
CTR9-204ENST00000529355 EREGO14944 169 aa8.38□□□□□ -1.07
CTR9-204ENST00000529355 OIP5O43482 229 aa8.38□□□□□ -1.07
CTR9-204ENST00000529355 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
CTR9-204ENST00000529355 LCE3BQ5TA77 95 aa8.38□□□□□ -1.07
CTR9-204ENST00000529355 TTC39BQ5VTQ0 682 aaPredicted RBP8.38□□□□□ -1.07
CTR9-204ENST00000529355 C8orf86Q6ZUL3 223 aa8.38□□□□□ -1.07
CTR9-204ENST00000529355 TNFRSF25Q93038 417 aa8.38□□□□□ -1.07
CTR9-204ENST00000529355 STARD13Q9Y3M8 1113 aa8.38□□□□□ -1.07
CTR9-204ENST00000529355 TRPA1O75762 1119 aa8.37□□□□□ -1.07
CTR9-204ENST00000529355 BCRP11274 1271 aa8.37□□□□□ -1.07
CTR9-204ENST00000529355 ADH7P40394 386 aa8.37□□□□□ -1.07
CTR9-204ENST00000529355 USP5P45974 858 aa8.37□□□□□ -1.07
CTR9-204ENST00000529355 DSC3Q14574 896 aa8.37□□□□□ -1.07
CTR9-204ENST00000529355 CCDC27Q2M243 656 aa8.37□□□□□ -1.07
CTR9-204ENST00000529355 SLCO4C1Q6ZQN7 724 aa8.37□□□□□ -1.07
CTR9-204ENST00000529355 GOLGA6L1Q8N7Z2 621 aa8.37□□□□□ -1.07
CTR9-204ENST00000529355 TTC16Q8NEE8 873 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms