RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 LTBP1Q14766 1721 aa20.3■□□□□ 0.84
CTSB-215ENST00000528965 CDHR2Q9BYE9 1310 aa20.29■□□□□ 0.84
CTSB-215ENST00000528965 RASSF10A6NK89 507 aa20.29■□□□□ 0.84
CTSB-215ENST00000528965 CAPN15O75808 1086 aa20.29■□□□□ 0.84
CTSB-215ENST00000528965 VEGFBP49765 207 aa20.29■□□□□ 0.84
CTSB-215ENST00000528965 KIAA2012Q0VF49 1180 aa20.29■□□□□ 0.84
CTSB-215ENST00000528965 ADARB2Q9NS39 739 aaKnown RBP20.29■□□□□ 0.84
CTSB-215ENST00000528965 DEFB115Q30KQ5 88 aa20.28■□□□□ 0.84
CTSB-215ENST00000528965 DUSP27Q5VZP5 1158 aa20.28■□□□□ 0.84
CTSB-215ENST00000528965 PRKRIP1Q9H875 184 aaPredicted RBP20.28■□□□□ 0.84
CTSB-215ENST00000528965 GPRC5DQ9NZD1 345 aa20.28■□□□□ 0.84
CTSB-215ENST00000528965 GOLGA2Q08379 1002 aa20.27■□□□□ 0.84
CTSB-215ENST00000528965 TNIP1Q15025 636 aa20.27■□□□□ 0.84
CTSB-215ENST00000528965 CIAPIN1Q6FI81 312 aa20.27■□□□□ 0.84
CTSB-215ENST00000528965 MBIPQ9NS73 344 aa20.27■□□□□ 0.84
CTSB-215ENST00000528965 HSP90B1P14625 803 aaKnown RBP20.26■□□□□ 0.83
CTSB-215ENST00000528965 CTCFP49711 727 aaPredicted RBP20.26■□□□□ 0.83
CTSB-215ENST00000528965 CXCL9Q07325 125 aa20.26■□□□□ 0.83
CTSB-215ENST00000528965 ISCA1Q9BUE6 129 aa20.26■□□□□ 0.83
CTSB-215ENST00000528965 CHMP4AQ9BY43 222 aa20.26■□□□□ 0.83
CTSB-215ENST00000528965 IFT57Q9NWB7 429 aa20.26■□□□□ 0.83
CTSB-215ENST00000528965 LRRC37AA6NMS7 1700 aa20.25■□□□□ 0.83
CTSB-215ENST00000528965 FOXN1O15353 648 aa20.25■□□□□ 0.83
CTSB-215ENST00000528965 GNAI1P63096 354 aa20.25■□□□□ 0.83
CTSB-215ENST00000528965 BCL2L13Q9BXK5 485 aa20.25■□□□□ 0.83
CTSB-215ENST00000528965 ATP5J2-PTCD1G3V325 749 aa20.24■□□□□ 0.83
CTSB-215ENST00000528965 GMPSP49915 693 aaPredicted RBP20.24■□□□□ 0.83
CTSB-215ENST00000528965 SF3B3Q15393 1217 aaKnown RBP20.24■□□□□ 0.83
CTSB-215ENST00000528965 FAM89AQ96GI7 184 aa20.24■□□□□ 0.83
CTSB-215ENST00000528965 PRDM10Q9NQV6 1147 aa20.24■□□□□ 0.83
CTSB-215ENST00000528965 DDX60Q8IY21 1712 aaKnown RBP20.24■□□□□ 0.83
CTSB-215ENST00000528965 ECE1P42892 770 aa20.23■□□□□ 0.83
CTSB-215ENST00000528965 MAP2K1Q02750 393 aaPredicted RBP20.23■□□□□ 0.83
CTSB-215ENST00000528965 TRIM28Q13263 835 aaKnown RBP20.23■□□□□ 0.83
CTSB-215ENST00000528965 PAXIP1Q6ZW49 1069 aaPredicted RBP20.23■□□□□ 0.83
CTSB-215ENST00000528965 WDR33Q9C0J8 1336 aaKnown RBP20.23■□□□□ 0.83
CTSB-215ENST00000528965 DUOX1Q9NRD9 1551 aa20.22■□□□□ 0.83
CTSB-215ENST00000528965 IRS4O14654 1257 aaPredicted RBP20.22■□□□□ 0.83
CTSB-215ENST00000528965 RAD17O75943 681 aa20.22■□□□□ 0.83
CTSB-215ENST00000528965 ZNF853P0CG23 659 aa20.22■□□□□ 0.83
CTSB-215ENST00000528965 RIC3Q7Z5B4 369 aa20.22■□□□□ 0.83
CTSB-215ENST00000528965 WBP1LQ9NX94 342 aa20.22■□□□□ 0.83
CTSB-215ENST00000528965 APAF1O14727 1248 aa20.21■□□□□ 0.83
CTSB-215ENST00000528965 ZNF428Q96B54 188 aa20.21■□□□□ 0.83
CTSB-215ENST00000528965 EYA3Q99504 573 aa20.21■□□□□ 0.83
CTSB-215ENST00000528965 NSFL1CQ9UNZ2 370 aaKnown RBP20.21■□□□□ 0.83
CTSB-215ENST00000528965 WASHC4Q2M389 1173 aa20.2■□□□□ 0.82
CTSB-215ENST00000528965 ZC3H15Q8WU90 426 aaKnown RBP20.2■□□□□ 0.82
CTSB-215ENST00000528965 CELF1Q92879 486 aaKnown RBP20.2■□□□□ 0.82
CTSB-215ENST00000528965 H7C1D1 291 aa20.19■□□□□ 0.82
CTSB-215ENST00000528965 DDX58O95786 925 aaKnown RBP20.19■□□□□ 0.82
CTSB-215ENST00000528965 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
CTSB-215ENST00000528965 ZBTB38Q8NAP3 1195 aaPredicted RBP20.19■□□□□ 0.82
CTSB-215ENST00000528965 TRPM7Q96QT4 1865 aa20.19■□□□□ 0.82
CTSB-215ENST00000528965 THSD7BQ9C0I4 1608 aa20.19■□□□□ 0.82
CTSB-215ENST00000528965 C6orf229H3BNL8 230 aa20.18■□□□□ 0.82
CTSB-215ENST00000528965 TRAF5O00463 557 aa20.18■□□□□ 0.82
CTSB-215ENST00000528965 ZEB1P37275 1124 aaPredicted RBP20.18■□□□□ 0.82
CTSB-215ENST00000528965 CAPNS2Q96L46 248 aa20.18■□□□□ 0.82
CTSB-215ENST00000528965 BEGAINQ9BUH8 593 aa20.18■□□□□ 0.82
CTSB-215ENST00000528965 TLL2Q9Y6L7 1015 aa20.18■□□□□ 0.82
CTSB-215ENST00000528965 CCDC30Q5VVM6 783 aa20.17■□□□□ 0.82
CTSB-215ENST00000528965 CCDC191Q8NCU4 936 aa20.17■□□□□ 0.82
CTSB-215ENST00000528965 YDJCA8MPS7 323 aa20.16■□□□□ 0.82
CTSB-215ENST00000528965 ELL2O00472 640 aaPredicted RBP20.16■□□□□ 0.82
CTSB-215ENST00000528965 CELF2O95319 508 aaKnown RBP20.16■□□□□ 0.82
CTSB-215ENST00000528965 RPS12P25398 132 aaKnown RBP20.16■□□□□ 0.82
CTSB-215ENST00000528965 RPS8P62241 208 aaKnown RBP20.16■□□□□ 0.82
CTSB-215ENST00000528965 CCDC152Q4G0S7 254 aa20.16■□□□□ 0.82
CTSB-215ENST00000528965 DPF2Q92785 391 aa20.16■□□□□ 0.82
CTSB-215ENST00000528965 MYD88Q99836 296 aa20.16■□□□□ 0.82
CTSB-215ENST00000528965 PHAXQ9H814 394 aaKnown RBP20.16■□□□□ 0.82
CTSB-215ENST00000528965 DBNDD1Q9H9R9 158 aa20.16■□□□□ 0.82
CTSB-215ENST00000528965 PGAP2Q9UHJ9 254 aa20.16■□□□□ 0.82
CTSB-215ENST00000528965 CNOT7Q9UIV1 285 aaKnown RBP20.16■□□□□ 0.82
CTSB-215ENST00000528965 TAF1P21675 1872 aa20.16■□□□□ 0.82
CTSB-215ENST00000528965 LBX1P52954 281 aa20.15■□□□□ 0.82
CTSB-215ENST00000528965 GPSM2P81274 684 aa20.15■□□□□ 0.82
CTSB-215ENST00000528965 FMR1Q06787 632 aaKnown RBP eCLIP20.15■□□□□ 0.82
CTSB-215ENST00000528965 GRM1Q13255 1194 aa20.15■□□□□ 0.82
CTSB-215ENST00000528965 CST9Q5W186 159 aa20.15■□□□□ 0.82
CTSB-215ENST00000528965 CDC37L1Q7L3B6 337 aa20.15■□□□□ 0.82
CTSB-215ENST00000528965 MICALL2Q8IY33 904 aa20.15■□□□□ 0.82
CTSB-215ENST00000528965 TRPM4Q8TD43 1214 aa20.15■□□□□ 0.82
CTSB-215ENST00000528965 GLIS2Q9BZE0 524 aaPredicted RBP20.15■□□□□ 0.82
CTSB-215ENST00000528965 CWC25Q9NXE8 425 aaPredicted RBP20.15■□□□□ 0.82
CTSB-215ENST00000528965 RIMBP2O15034 1052 aa20.14■□□□□ 0.81
CTSB-215ENST00000528965 ECE2O60344 883 aa20.14■□□□□ 0.81
CTSB-215ENST00000528965 PCCAP05165 728 aaPredicted RBP20.14■□□□□ 0.81
CTSB-215ENST00000528965 CYP4F22Q6NT55 531 aa20.14■□□□□ 0.81
CTSB-215ENST00000528965 GPR101Q96P66 508 aaPredicted RBP20.14■□□□□ 0.81
CTSB-215ENST00000528965 POLLQ9UGP5 575 aa20.14■□□□□ 0.81
CTSB-215ENST00000528965 G3V3G9 751 aa20.13■□□□□ 0.81
CTSB-215ENST00000528965 PSMD14O00487 310 aa20.13■□□□□ 0.81
CTSB-215ENST00000528965 PDE8AO60658 829 aa20.13■□□□□ 0.81
CTSB-215ENST00000528965 HSPA8P11142 646 aaKnown RBP20.13■□□□□ 0.81
CTSB-215ENST00000528965 DCAF8Q5TAQ9 597 aa20.13■□□□□ 0.81
CTSB-215ENST00000528965 TBC1D16Q8TBP0 767 aa20.13■□□□□ 0.81
CTSB-215ENST00000528965 HHIPL1Q96JK4 782 aa20.13■□□□□ 0.81
CTSB-215ENST00000528965 METTL22Q9BUU2 404 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms