RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 ANKRD13DQ6ZTN6 518 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 TMC6Q7Z403 805 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 ERMNQ8TAM6 284 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 RHPN1Q8TCX5 695 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 ZNF219Q9P2Y4 722 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-219ENST00000528621 RTL9Q8NET4 1388 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 DNMT1P26358 1616 aaKnown RBP9.76□□□□□ -0.85
CTNND1-219ENST00000528621 GNAQP50148 359 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 MAP2K1Q02750 393 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-219ENST00000528621 TDRD12Q587J7 1177 aaKnown RBP9.76□□□□□ -0.85
CTNND1-219ENST00000528621 DYDC1Q8WWB3 177 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 NYXQ9GZU5 481 aa9.76□□□□□ -0.85
CTNND1-219ENST00000528621 TUBB4AP04350 444 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 ZSCAN22P10073 491 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-219ENST00000528621 CCDC102BQ68D86 513 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 MICALCLQ6ZW33 695 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 UBE3BQ7Z3V4 1068 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 CALM1P0DP23 149 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 CALM2P0DP24 149 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 CALM3P0DP25 149 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 ZCRB1Q8TBF4 217 aaKnown RBP9.75□□□□□ -0.85
CTNND1-219ENST00000528621 LARP6Q9BRS8 491 aaKnown RBP9.75□□□□□ -0.85
CTNND1-219ENST00000528621 EXOC1Q9NV70 894 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 MYO1BO43795 1136 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 KCNG4Q8TDN1 519 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 SNX21Q969T3 373 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 FAM107BQ9H098 131 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 RBM27Q9P2N5 1060 aaKnown RBP9.75□□□□□ -0.85
CTNND1-219ENST00000528621 URI1O94763 535 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-219ENST00000528621 IGHDP01880 384 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 TSPY3P0CV98 308 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 TSPY8P0CW00 308 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 IL15P40933 162 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-219ENST00000528621 CHMP4BP1P59074 171 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 WTAPQ15007 396 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 KLHL40Q2TBA0 621 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 ANKRD44Q8N8A2 993 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 ORC3Q9UBD5 711 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-219ENST00000528621 FLT4P35916 1363 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 NPHP3Q7Z494 1330 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 IFFO1Q0D2I5 559 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 MCMDC2Q4G0Z9 681 aa9.75□□□□□ -0.85
CTNND1-219ENST00000528621 CCDC171Q6TFL3 1326 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 LIG1P18858 919 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 HAND2P61296 217 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 NBPF6Q5VWK0 638 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 KSR2Q6VAB6 950 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 NBPF5PQ86XG9 351 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-219ENST00000528621 NBPF4Q96M43 638 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 PAXBP1Q9Y5B6 917 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 CPLX3Q8WVH0 158 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 CTNNBL1Q8WYA6 563 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-219ENST00000528621 FEZ1Q99689 392 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 VAT1LQ9HCJ6 419 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 SLC4A4Q9Y6R1 1079 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 ZNF622Q969S3 477 aaKnown RBP eCLIP9.74□□□□□ -0.853e-7■□□□□ 10.1
CTNND1-219ENST00000528621 MAP3K5Q99683 1374 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 GOLGA6L10A0A0M3HER8 536 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 NBPF7P0C2Y1 421 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-219ENST00000528621 RBM25P49756 843 aaKnown RBP9.74□□□□□ -0.85
CTNND1-219ENST00000528621 IFIT1BQ5T764 474 aaKnown RBP9.74□□□□□ -0.85
CTNND1-219ENST00000528621 MICU3Q86XE3 530 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 CCDC113Q9H0I3 377 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 TMX1Q9H3N1 280 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 SNRKQ9NRH2 765 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 RAD50Q92878 1312 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 TNNT1P13805 278 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 USP37Q86T82 979 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 SYCP3Q8IZU3 236 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 BABAM1Q9NWV8 329 aa9.74□□□□□ -0.85
CTNND1-219ENST00000528621 ZNF804AQ7Z570 1209 aa9.73□□□□□ -0.85
CTNND1-219ENST00000528621 SKAP1Q86WV1 359 aa9.73□□□□□ -0.85
CTNND1-219ENST00000528621 ESR2Q92731 530 aa9.73□□□□□ -0.85
CTNND1-219ENST00000528621 TTC12Q9H892 705 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-219ENST00000528621 EIF4G3O43432 1585 aaKnown RBP9.73□□□□□ -0.85
CTNND1-219ENST00000528621 ADCY5O95622 1261 aa9.73□□□□□ -0.85
CTNND1-219ENST00000528621 NPATQ14207 1427 aa9.73□□□□□ -0.85
CTNND1-219ENST00000528621 SLC4A8Q2Y0W8 1093 aa9.73□□□□□ -0.85
CTNND1-219ENST00000528621 TSHZ3Q63HK5 1081 aa9.73□□□□□ -0.85
CTNND1-219ENST00000528621 ESYT1Q9BSJ8 1104 aa9.73□□□□□ -0.85
CTNND1-219ENST00000528621 USP25Q9UHP3 1055 aa9.73□□□□□ -0.85
CTNND1-219ENST00000528621 TBCAO75347 108 aaKnown RBP9.73□□□□□ -0.85
CTNND1-219ENST00000528621 LRSAM1Q6UWE0 723 aa9.73□□□□□ -0.85
CTNND1-219ENST00000528621 UTP14AQ9BVJ6 771 aaKnown RBP9.73□□□□□ -0.85
CTNND1-219ENST00000528621 KLF18A0A0U1RQI7 1052 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 CYP7A1P22680 504 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 CKAP4Q07065 602 aaKnown RBP9.72□□□□□ -0.85
CTNND1-219ENST00000528621 HDAC9Q9UKV0 1011 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 CFAP74Q9C0B2 1584 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 PBRM1Q86U86 1689 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 BIN1O00499 593 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 ZSCAN23Q3MJ62 389 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 XAGE3Q8WTP9 111 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 NAP1L4Q99733 375 aaKnown RBP9.72□□□□□ -0.85
CTNND1-219ENST00000528621 FERMT1Q9BQL6 677 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 ERICH4A6NGS2 130 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 GRM8O00222 908 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 ZBTB43O43298 467 aa9.72□□□□□ -0.85
CTNND1-219ENST00000528621 SPAG1Q07617 926 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms