RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 NLRP10Q86W26 655 aa9.4□□□□□ -0.9
SOX6-211ENST00000528429 TRMT112Q9UI30 125 aaKnown RBP9.4□□□□□ -0.9
SOX6-211ENST00000528429 RFX5P48382 616 aaPredicted RBP9.39□□□□□ -0.91
SOX6-211ENST00000528429 SMIM5Q71RC9 77 aa9.39□□□□□ -0.91
SOX6-211ENST00000528429 EAF2Q96CJ1 260 aaPredicted RBP9.39□□□□□ -0.91
SOX6-211ENST00000528429 GPATCH3Q96I76 525 aa9.39□□□□□ -0.91
SOX6-211ENST00000528429 ZNF594Q96JF6 807 aaPredicted RBP9.39□□□□□ -0.91
SOX6-211ENST00000528429 COPRSQ9NQ92 184 aa9.39□□□□□ -0.91
SOX6-211ENST00000528429 TLR7Q9NYK1 1049 aaKnown RBP9.39□□□□□ -0.91
SOX6-211ENST00000528429 TFCP2Q12800 502 aa9.39□□□□□ -0.91
SOX6-211ENST00000528429 PCCAP05165 728 aaPredicted RBP9.38□□□□□ -0.91
SOX6-211ENST00000528429 ADRA2BP18089 450 aa9.38□□□□□ -0.91
SOX6-211ENST00000528429 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
SOX6-211ENST00000528429 ZBTB38Q8NAP3 1195 aaPredicted RBP9.38□□□□□ -0.91
SOX6-211ENST00000528429 LINC00116Q8NCU8 138 aa9.38□□□□□ -0.91
SOX6-211ENST00000528429 PI4K2BQ8TCG2 481 aa9.38□□□□□ -0.91
SOX6-211ENST00000528429 ECHDC1Q9NTX5 307 aa9.38□□□□□ -0.91
SOX6-211ENST00000528429 NUP188Q5SRE5 1749 aa9.38□□□□□ -0.91
SOX6-211ENST00000528429 CCDC57Q2TAC2 916 aa9.38□□□□□ -0.91
SOX6-211ENST00000528429 ERVV-1B6SEH8 477 aa9.38□□□□□ -0.91
SOX6-211ENST00000528429 ERC2O15083 957 aa9.38□□□□□ -0.91
SOX6-211ENST00000528429 GLRX3O76003 335 aaKnown RBP9.38□□□□□ -0.91
SOX6-211ENST00000528429 AOX1Q06278 1338 aa9.37□□□□□ -0.91
SOX6-211ENST00000528429 UBN2Q6ZU65 1347 aa9.37□□□□□ -0.91
SOX6-211ENST00000528429 TJP1Q07157 1748 aa9.37□□□□□ -0.91
SOX6-211ENST00000528429 COL15A1P39059 1388 aa9.37□□□□□ -0.91
SOX6-211ENST00000528429 IRS4O14654 1257 aaPredicted RBP9.37□□□□□ -0.91
SOX6-211ENST00000528429 BECN1Q14457 450 aa9.37□□□□□ -0.91
SOX6-211ENST00000528429 CCNL1Q9UK58 526 aaPredicted RBP9.37□□□□□ -0.91
SOX6-211ENST00000528429 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.37□□□□□ -0.91
SOX6-211ENST00000528429 LRRC24Q50LG9 513 aa9.37□□□□□ -0.91
SOX6-211ENST00000528429 CNTROBQ8N137 903 aa9.37□□□□□ -0.91
SOX6-211ENST00000528429 PUS3Q9BZE2 481 aaKnown RBP9.37□□□□□ -0.91
SOX6-211ENST00000528429 NIP7Q9Y221 180 aaKnown RBP eCLIP9.37□□□□□ -0.91
SOX6-211ENST00000528429 TTC41PQ6P2S7 1318 aa9.37□□□□□ -0.91
SOX6-211ENST00000528429 ATRNO75882 1429 aa9.37□□□□□ -0.91
SOX6-211ENST00000528429 CAMTA2O94983 1202 aa9.36□□□□□ -0.91
SOX6-211ENST00000528429 REC8O95072 547 aa9.36□□□□□ -0.91
SOX6-211ENST00000528429 CHMLP26374 656 aa9.36□□□□□ -0.91
SOX6-211ENST00000528429 RBM25P49756 843 aaKnown RBP9.36□□□□□ -0.91
SOX6-211ENST00000528429 IFIT5Q13325 482 aaKnown RBP9.36□□□□□ -0.91
SOX6-211ENST00000528429 TNNI3KQ59H18 835 aa9.36□□□□□ -0.91
SOX6-211ENST00000528429 BICDL1Q6ZP65 573 aa9.36□□□□□ -0.91
SOX6-211ENST00000528429 NEUROD6Q96NK8 337 aa9.36□□□□□ -0.91
SOX6-211ENST00000528429 BOLA2Q9H3K6 86 aa9.36□□□□□ -0.91
SOX6-211ENST00000528429 FPGT-TNNI3KV9GXZ4 949 aa9.36□□□□□ -0.91
SOX6-211ENST00000528429 GNPATO15228 680 aa9.36□□□□□ -0.91
SOX6-211ENST00000528429 RRP9O43818 475 aaKnown RBP9.36□□□□□ -0.91
SOX6-211ENST00000528429 HCLS1P14317 486 aaPredicted RBP9.36□□□□□ -0.91
SOX6-211ENST00000528429 ANO2Q9NQ90 1003 aa9.36□□□□□ -0.91
SOX6-211ENST00000528429 CTSWP56202 376 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 SUSD4Q5VX71 490 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 ATG9AQ7Z3C6 839 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 ZNF34Q8IZ26 560 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 SPRYD3Q8NCJ5 442 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 RGS22Q8NE09 1264 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 ESYT1Q9BSJ8 1104 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 GREM2Q9H772 168 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 DBNLQ9UJU6 430 aaKnown RBP9.35□□□□□ -0.91
SOX6-211ENST00000528429 THSD7AQ9UPZ6 1657 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 EYA2O00167 538 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 ONECUT3O60422 494 aaPredicted RBP9.35□□□□□ -0.91
SOX6-211ENST00000528429 DBNDD2Q9BQY9 259 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 TBC1D2Q9BYX2 928 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 NDUFB9Q9Y6M9 179 aa9.35□□□□□ -0.91
SOX6-211ENST00000528429 USP42Q9H9J4 1324 aaKnown RBP9.34□□□□□ -0.91
SOX6-211ENST00000528429 PHF14O94880 888 aa9.34□□□□□ -0.91
SOX6-211ENST00000528429 ITGA6P23229 1130 aa9.34□□□□□ -0.91
SOX6-211ENST00000528429 IL15P40933 162 aaPredicted RBP9.34□□□□□ -0.91
SOX6-211ENST00000528429 TIMM10P62072 90 aa9.34□□□□□ -0.91
SOX6-211ENST00000528429 TTLL11Q8NHH1 800 aa9.34□□□□□ -0.91
SOX6-211ENST00000528429 UTP14AQ9BVJ6 771 aaKnown RBP9.34□□□□□ -0.91
SOX6-211ENST00000528429 USP26Q9BXU7 913 aa9.34□□□□□ -0.91
SOX6-211ENST00000528429 DIAPH3Q9NSV4 1193 aa9.34□□□□□ -0.91
SOX6-211ENST00000528429 ZNF652Q9Y2D9 606 aa9.34□□□□□ -0.91
SOX6-211ENST00000528429 MYH14Q7Z406 1995 aaKnown RBP9.34□□□□□ -0.91
SOX6-211ENST00000528429 SH3TC1Q8TE82 1336 aa9.34□□□□□ -0.91
SOX6-211ENST00000528429 CDHR2Q9BYE9 1310 aa9.34□□□□□ -0.91
SOX6-211ENST00000528429 CWC27Q6UX04 472 aaKnown RBP9.34□□□□□ -0.91
SOX6-211ENST00000528429 KRT27Q7Z3Y8 459 aa9.34□□□□□ -0.91
SOX6-211ENST00000528429 CEP126Q9P2H0 1117 aa9.34□□□□□ -0.91
SOX6-211ENST00000528429 PDE8AO60658 829 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 TRIM37O94972 964 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 LDHAL6AQ6ZMR3 332 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 EDC3Q96F86 508 aaKnown RBP9.33□□□□□ -0.92
SOX6-211ENST00000528429 DNAJC2Q99543 621 aaKnown RBP9.33□□□□□ -0.92
SOX6-211ENST00000528429 PLA2G12BQ9BX93 195 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 IL25Q9H293 177 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 SLKQ9H2G2 1235 aaPredicted RBP9.33□□□□□ -0.92
SOX6-211ENST00000528429 SRP68Q9UHB9 627 aaKnown RBP9.33□□□□□ -0.92
SOX6-211ENST00000528429 CNTNAP4Q9C0A0 1308 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 ANKRD18BA2A2Z9 1011 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 VGLL3A8MV65 326 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 CSF1RP07333 972 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 HSCBQ8IWL3 235 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 KIF2CQ99661 725 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 CNNM1Q9NRU3 951 aa9.33□□□□□ -0.92
SOX6-211ENST00000528429 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
SOX6-211ENST00000528429 PARP10Q53GL7 1025 aa9.32□□□□□ -0.92
SOX6-211ENST00000528429 GORABQ5T7V8 394 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms