RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 IFT57Q9NWB7 429 aa33.59■■■□□ 2.97
TRIM3-206ENST00000528227 MPNDQ8N594 471 aa33.58■■■□□ 2.97
TRIM3-206ENST00000528227 TAF1P21675 1872 aa33.58■■■□□ 2.97
TRIM3-206ENST00000528227 ATP5J2-PTCD1G3V325 749 aa33.57■■■□□ 2.96
TRIM3-206ENST00000528227 EPS15P42566 896 aa33.57■■■□□ 2.96
TRIM3-206ENST00000528227 CALD1Q05682 793 aaKnown RBP33.56■■■□□ 2.96
TRIM3-206ENST00000528227 FAM89AQ96GI7 184 aa33.56■■■□□ 2.96
TRIM3-206ENST00000528227 ZNRF3Q9ULT6 936 aa33.56■■■□□ 2.96
TRIM3-206ENST00000528227 LRRC37AA6NMS7 1700 aa33.56■■■□□ 2.96
TRIM3-206ENST00000528227 GNAI1P63096 354 aa33.55■■■□□ 2.96
TRIM3-206ENST00000528227 TMC4Q7Z404 712 aa33.54■■■□□ 2.96
TRIM3-206ENST00000528227 KIAA2012Q0VF49 1180 aa33.53■■■□□ 2.96
TRIM3-206ENST00000528227 DUOX1Q9NRD9 1551 aa33.52■■■□□ 2.96
TRIM3-206ENST00000528227 CXCL9Q07325 125 aa33.52■■■□□ 2.96
TRIM3-206ENST00000528227 TRIM28Q13263 835 aaKnown RBP33.52■■■□□ 2.96
TRIM3-206ENST00000528227 SF3B3Q15393 1217 aaKnown RBP33.52■■■□□ 2.96
TRIM3-206ENST00000528227 USP50Q70EL3 339 aaPredicted RBP33.52■■■□□ 2.96
TRIM3-206ENST00000528227 ELL2O00472 640 aaPredicted RBP33.5■■■□□ 2.95
TRIM3-206ENST00000528227 GPRC5DQ9NZD1 345 aa33.5■■■□□ 2.95
TRIM3-206ENST00000528227 VEGFBP49765 207 aa33.49■■■□□ 2.95
TRIM3-206ENST00000528227 PHAXQ9H814 394 aaKnown RBP33.49■■■□□ 2.95
TRIM3-206ENST00000528227 GOLGA2Q08379 1002 aa33.48■■■□□ 2.95
TRIM3-206ENST00000528227 RTL5Q5HYW3 569 aaPredicted RBP33.48■■■□□ 2.95
TRIM3-206ENST00000528227 RIC3Q7Z5B4 369 aa33.48■■■□□ 2.95
TRIM3-206ENST00000528227 CELF1Q92879 486 aaKnown RBP33.48■■■□□ 2.95
TRIM3-206ENST00000528227 TNS4Q8IZW8 715 aa33.47■■■□□ 2.95
TRIM3-206ENST00000528227 C8orf58Q8NAV2 365 aa33.47■■■□□ 2.95
TRIM3-206ENST00000528227 ADARB2Q9NS39 739 aaKnown RBP33.47■■■□□ 2.95
TRIM3-206ENST00000528227 COL4A1P02462 1669 aa33.47■■■□□ 2.95
TRIM3-206ENST00000528227 RASSF10A6NK89 507 aa33.46■■■□□ 2.95
TRIM3-206ENST00000528227 IRS4O14654 1257 aaPredicted RBP33.46■■■□□ 2.95
TRIM3-206ENST00000528227 CIAPIN1Q6FI81 312 aa33.46■■■□□ 2.95
TRIM3-206ENST00000528227 GMPSP49915 693 aaPredicted RBP33.45■■■□□ 2.95
TRIM3-206ENST00000528227 RAD17O75943 681 aa33.43■■■□□ 2.94
TRIM3-206ENST00000528227 DEFB115Q30KQ5 88 aa33.43■■■□□ 2.94
TRIM3-206ENST00000528227 ZBTB38Q8NAP3 1195 aaPredicted RBP33.43■■■□□ 2.94
TRIM3-206ENST00000528227 CDHR2Q9BYE9 1310 aa33.43■■■□□ 2.94
TRIM3-206ENST00000528227 YDJCA8MPS7 323 aa33.42■■■□□ 2.94
TRIM3-206ENST00000528227 FMR1Q06787 632 aaKnown RBP eCLIP33.42■■■□□ 2.94
TRIM3-206ENST00000528227 TNIP1Q15025 636 aa33.42■■■□□ 2.94
TRIM3-206ENST00000528227 CCDC184Q52MB2 194 aa33.42■■■□□ 2.94
TRIM3-206ENST00000528227 MYD88Q99836 296 aa33.42■■■□□ 2.94
TRIM3-206ENST00000528227 ABT1Q9ULW3 272 aaKnown RBP33.41■■■□□ 2.94
TRIM3-206ENST00000528227 NSFL1CQ9UNZ2 370 aaKnown RBP33.41■■■□□ 2.94
TRIM3-206ENST00000528227 FOXN1O15353 648 aa33.39■■■□□ 2.94
TRIM3-206ENST00000528227 WASHC4Q2M389 1173 aa33.39■■■□□ 2.94
TRIM3-206ENST00000528227 CCDC30Q5VVM6 783 aa33.39■■■□□ 2.94
TRIM3-206ENST00000528227 CCDC191Q8NCU4 936 aa33.39■■■□□ 2.94
TRIM3-206ENST00000528227 BCL2L13Q9BXK5 485 aa33.39■■■□□ 2.94
TRIM3-206ENST00000528227 TRPM7Q96QT4 1865 aa33.39■■■□□ 2.94
TRIM3-206ENST00000528227 TRAF5O00463 557 aa33.38■■■□□ 2.93
TRIM3-206ENST00000528227 GPSM2P81274 684 aa33.38■■■□□ 2.93
TRIM3-206ENST00000528227 CHMP4AQ9BY43 222 aa33.38■■■□□ 2.93
TRIM3-206ENST00000528227 POLLQ9UGP5 575 aa33.38■■■□□ 2.93
TRIM3-206ENST00000528227 HSP90B1P14625 803 aaKnown RBP33.37■■■□□ 2.93
TRIM3-206ENST00000528227 RPS8P62241 208 aaKnown RBP33.37■■■□□ 2.93
TRIM3-206ENST00000528227 TSPYL6Q8N831 410 aa33.37■■■□□ 2.93
TRIM3-206ENST00000528227 PCCAP05165 728 aaPredicted RBP33.36■■■□□ 2.93
TRIM3-206ENST00000528227 METTL22Q9BUU2 404 aaPredicted RBP33.36■■■□□ 2.93
TRIM3-206ENST00000528227 WDR33Q9C0J8 1336 aaKnown RBP33.35■■■□□ 2.93
TRIM3-206ENST00000528227 C6orf229H3BNL8 230 aa33.35■■■□□ 2.93
TRIM3-206ENST00000528227 DDX58O95786 925 aaKnown RBP33.35■■■□□ 2.93
TRIM3-206ENST00000528227 CST9Q5W186 159 aa33.35■■■□□ 2.93
TRIM3-206ENST00000528227 CWC25Q9NXE8 425 aaPredicted RBP33.35■■■□□ 2.93
TRIM3-206ENST00000528227 PGAP2Q9UHJ9 254 aa33.35■■■□□ 2.93
TRIM3-206ENST00000528227 CCDC27Q2M243 656 aa33.34■■■□□ 2.93
TRIM3-206ENST00000528227 TSR2Q969E8 191 aaKnown RBP33.34■■■□□ 2.93
TRIM3-206ENST00000528227 AIDAQ96BJ3 306 aa33.34■■■□□ 2.93
TRIM3-206ENST00000528227 DBNDD1Q9H9R9 158 aa33.34■■■□□ 2.93
TRIM3-206ENST00000528227 SEC31BQ9NQW1 1179 aa33.34■■■□□ 2.93
TRIM3-206ENST00000528227 WBP1LQ9NX94 342 aa33.34■■■□□ 2.93
TRIM3-206ENST00000528227 RIMBP2O15034 1052 aa33.33■■■□□ 2.93
TRIM3-206ENST00000528227 HIRAP54198 1017 aaPredicted RBP33.33■■■□□ 2.93
TRIM3-206ENST00000528227 CNOT7Q9UIV1 285 aaKnown RBP33.33■■■□□ 2.93
TRIM3-206ENST00000528227 TBC1D16Q8TBP0 767 aa33.32■■■□□ 2.92
TRIM3-206ENST00000528227 TRPM4Q8TD43 1214 aa33.32■■■□□ 2.92
TRIM3-206ENST00000528227 ZC3H15Q8WU90 426 aaKnown RBP33.32■■■□□ 2.92
TRIM3-206ENST00000528227 EYA3Q99504 573 aa33.32■■■□□ 2.92
TRIM3-206ENST00000528227 SHTN1A0MZ66 631 aa33.31■■■□□ 2.92
TRIM3-206ENST00000528227 PSMD14O00487 310 aa33.31■■■□□ 2.92
TRIM3-206ENST00000528227 PDE8AO60658 829 aa33.31■■■□□ 2.92
TRIM3-206ENST00000528227 CCDC152Q4G0S7 254 aa33.31■■■□□ 2.92
TRIM3-206ENST00000528227 JARID2Q92833 1246 aaPredicted RBP33.31■■■□□ 2.92
TRIM3-206ENST00000528227 MAP3K2Q9Y2U5 619 aa33.31■■■□□ 2.92
TRIM3-206ENST00000528227 ZBTB12Q9Y330 459 aaPredicted RBP33.31■■■□□ 2.92
TRIM3-206ENST00000528227 THSD7BQ9C0I4 1608 aa33.31■■■□□ 2.92
TRIM3-206ENST00000528227 CAPN15O75808 1086 aa33.3■■■□□ 2.92
TRIM3-206ENST00000528227 CTCFP49711 727 aaPredicted RBP33.3■■■□□ 2.92
TRIM3-206ENST00000528227 WWC1Q8IX03 1113 aa33.3■■■□□ 2.92
TRIM3-206ENST00000528227 MICALL2Q8IY33 904 aa33.3■■■□□ 2.92
TRIM3-206ENST00000528227 GLIS2Q9BZE0 524 aaPredicted RBP33.3■■■□□ 2.92
TRIM3-206ENST00000528227 PODXL2Q9NZ53 605 aa33.3■■■□□ 2.92
TRIM3-206ENST00000528227 ECE2O60344 883 aa33.29■■■□□ 2.92
TRIM3-206ENST00000528227 DPF2Q92785 391 aa33.29■■■□□ 2.92
TRIM3-206ENST00000528227 GPR101Q96P66 508 aaPredicted RBP33.29■■■□□ 2.92
TRIM3-206ENST00000528227 PRDM10Q9NQV6 1147 aa33.29■■■□□ 2.92
TRIM3-206ENST00000528227 TLL2Q9Y6L7 1015 aa33.29■■■□□ 2.92
TRIM3-206ENST00000528227 H7C1D1 291 aa33.28■■■□□ 2.92
TRIM3-206ENST00000528227 DOK7Q18PE1 504 aa33.28■■■□□ 2.92
TRIM3-206ENST00000528227 KSR2Q6VAB6 950 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms