RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 DUOX1Q9NRD9 1551 aa11.04□□□□□ -0.64
CHD7-206ENST00000527900 ATP5J2-PTCD1G3V325 749 aa11.04□□□□□ -0.64
CHD7-206ENST00000527900 EIF6P56537 245 aaKnown RBP11.04□□□□□ -0.64
CHD7-206ENST00000527900 CALD1Q05682 793 aaKnown RBP11.04□□□□□ -0.64
CHD7-206ENST00000527900 AOC3Q16853 763 aa11.04□□□□□ -0.64
CHD7-206ENST00000527900 CCDC27Q2M243 656 aa11.04□□□□□ -0.64
CHD7-206ENST00000527900 NCBP3Q53F19 620 aaKnown RBP11.04□□□□□ -0.64
CHD7-206ENST00000527900 DDX46Q7L014 1031 aaKnown RBP11.04□□□□□ -0.64
CHD7-206ENST00000527900 TSPYL6Q8N831 410 aa11.04□□□□□ -0.64
CHD7-206ENST00000527900 ELL2O00472 640 aaPredicted RBP11.03□□□□□ -0.64
CHD7-206ENST00000527900 PPIP5K2O43314 1243 aa11.03□□□□□ -0.64
CHD7-206ENST00000527900 EPS15P42566 896 aa11.03□□□□□ -0.64
CHD7-206ENST00000527900 CXCL9Q07325 125 aa11.03□□□□□ -0.64
CHD7-206ENST00000527900 KIAA2012Q0VF49 1180 aa11.03□□□□□ -0.64
CHD7-206ENST00000527900 TMC4Q7Z404 712 aa11.03□□□□□ -0.64
CHD7-206ENST00000527900 MPNDQ8N594 471 aa11.03□□□□□ -0.64
CHD7-206ENST00000527900 SUPT20HQ8NEM7 779 aa11.03□□□□□ -0.64
CHD7-206ENST00000527900 ZNF428Q96B54 188 aa11.03□□□□□ -0.64
CHD7-206ENST00000527900 EAPPQ56P03 285 aaPredicted RBP11.02□□□□□ -0.65
CHD7-206ENST00000527900 DPP8Q6V1X1 898 aaPredicted RBP11.02□□□□□ -0.65
CHD7-206ENST00000527900 WWC1Q8IX03 1113 aa11.02□□□□□ -0.65
CHD7-206ENST00000527900 NIM1KQ8IY84 436 aa11.02□□□□□ -0.65
CHD7-206ENST00000527900 CNTROBQ8N137 903 aa11.02□□□□□ -0.65
CHD7-206ENST00000527900 ZBTB38Q8NAP3 1195 aaPredicted RBP11.02□□□□□ -0.65
CHD7-206ENST00000527900 CELF1Q92879 486 aaKnown RBP11.02□□□□□ -0.65
CHD7-206ENST00000527900 ZNRF3Q9ULT6 936 aa11.02□□□□□ -0.65
CHD7-206ENST00000527900 GJA3Q9Y6H8 435 aa11.02□□□□□ -0.65
CHD7-206ENST00000527900 CNTNAP1P78357 1384 aa11.02□□□□□ -0.65
CHD7-206ENST00000527900 TMEM88BA6NKF7 163 aa11.01□□□□□ -0.65
CHD7-206ENST00000527900 YDJCA8MPS7 323 aa11.01□□□□□ -0.65
CHD7-206ENST00000527900 IRS4O14654 1257 aaPredicted RBP11.01□□□□□ -0.65
CHD7-206ENST00000527900 COL13A1Q5TAT6 717 aaPredicted RBP11.01□□□□□ -0.65
CHD7-206ENST00000527900 MAP1SQ66K74 1059 aaPredicted RBP11.01□□□□□ -0.65
CHD7-206ENST00000527900 USP50Q70EL3 339 aaPredicted RBP11.01□□□□□ -0.65
CHD7-206ENST00000527900 RIC3Q7Z5B4 369 aa11.01□□□□□ -0.65
CHD7-206ENST00000527900 CCDC191Q8NCU4 936 aa11.01□□□□□ -0.65
CHD7-206ENST00000527900 TMX4Q9H1E5 349 aaPredicted RBP11.01□□□□□ -0.65
CHD7-206ENST00000527900 GPRC5DQ9NZD1 345 aa11.01□□□□□ -0.65
CHD7-206ENST00000527900 PCCAP05165 728 aaPredicted RBP11□□□□□ -0.65
CHD7-206ENST00000527900 RTL5Q5HYW3 569 aaPredicted RBP11□□□□□ -0.65
CHD7-206ENST00000527900 CCDC30Q5VVM6 783 aa11□□□□□ -0.65
CHD7-206ENST00000527900 MYD88Q99836 296 aa11□□□□□ -0.65
CHD7-206ENST00000527900 METTL22Q9BUU2 404 aaPredicted RBP11□□□□□ -0.65
CHD7-206ENST00000527900 POLLQ9UGP5 575 aa11□□□□□ -0.65
CHD7-206ENST00000527900 MKRN1Q9UHC7 482 aaKnown RBP11□□□□□ -0.65
CHD7-206ENST00000527900 PGAP2Q9UHJ9 254 aa11□□□□□ -0.65
CHD7-206ENST00000527900 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
CHD7-206ENST00000527900 HSPA1AP0DMV8 641 aaKnown RBP10.99□□□□□ -0.65
CHD7-206ENST00000527900 HSPA1BP0DMV9 641 aaKnown RBP10.99□□□□□ -0.65
CHD7-206ENST00000527900 LMOD1P29536 600 aaPredicted RBP10.99□□□□□ -0.65
CHD7-206ENST00000527900 ZEB1P37275 1124 aaPredicted RBP10.99□□□□□ -0.65
CHD7-206ENST00000527900 RPS8P62241 208 aaKnown RBP10.99□□□□□ -0.65
CHD7-206ENST00000527900 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
CHD7-206ENST00000527900 TSR2Q969E8 191 aaKnown RBP10.99□□□□□ -0.65
CHD7-206ENST00000527900 CHMP4AQ9BY43 222 aa10.99□□□□□ -0.65
CHD7-206ENST00000527900 IL16Q14005 1332 aa10.99□□□□□ -0.65
CHD7-206ENST00000527900 TRPM7Q96QT4 1865 aa10.99□□□□□ -0.65
CHD7-206ENST00000527900 CACNA1FO60840 1977 aa10.98□□□□□ -0.65
CHD7-206ENST00000527900 RASSF10A6NK89 507 aa10.98□□□□□ -0.65
CHD7-206ENST00000527900 IGKV5-2P06315 115 aa10.98□□□□□ -0.65
CHD7-206ENST00000527900 VEGFBP49765 207 aa10.98□□□□□ -0.65
CHD7-206ENST00000527900 GMPSP49915 693 aaPredicted RBP10.98□□□□□ -0.65
CHD7-206ENST00000527900 HIRAP54198 1017 aaPredicted RBP10.98□□□□□ -0.65
CHD7-206ENST00000527900 GPSM2P81274 684 aa10.98□□□□□ -0.65
CHD7-206ENST00000527900 FMR1Q06787 632 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHD7-206ENST00000527900 CST9Q5W186 159 aa10.98□□□□□ -0.65
CHD7-206ENST00000527900 CIAPIN1Q6FI81 312 aa10.98□□□□□ -0.65
CHD7-206ENST00000527900 KSR2Q6VAB6 950 aa10.98□□□□□ -0.65
CHD7-206ENST00000527900 SEC31BQ9NQW1 1179 aa10.98□□□□□ -0.65
CHD7-206ENST00000527900 ADARB2Q9NS39 739 aaKnown RBP10.98□□□□□ -0.65
CHD7-206ENST00000527900 PODXL2Q9NZ53 605 aa10.98□□□□□ -0.65
CHD7-206ENST00000527900 CDHR2Q9BYE9 1310 aa10.98□□□□□ -0.65
CHD7-206ENST00000527900 PI4KAP2A4QPH2 592 aa10.97□□□□□ -0.65
CHD7-206ENST00000527900 ZNF316A6NFI3 1004 aaPredicted RBP10.97□□□□□ -0.65
CHD7-206ENST00000527900 PDE8AO60658 829 aa10.97□□□□□ -0.65
CHD7-206ENST00000527900 DDX58O95786 925 aaKnown RBP10.97□□□□□ -0.65
CHD7-206ENST00000527900 TNIP1Q15025 636 aa10.97□□□□□ -0.65
CHD7-206ENST00000527900 WASHC4Q2M389 1173 aa10.97□□□□□ -0.65
CHD7-206ENST00000527900 G2E3Q7L622 706 aa10.97□□□□□ -0.65
CHD7-206ENST00000527900 PI4KAP1Q8N8J0 262 aa10.97□□□□□ -0.65
CHD7-206ENST00000527900 TBC1D16Q8TBP0 767 aa10.97□□□□□ -0.65
CHD7-206ENST00000527900 CWC25Q9NXE8 425 aaPredicted RBP10.97□□□□□ -0.65
CHD7-206ENST00000527900 NSFL1CQ9UNZ2 370 aaKnown RBP10.97□□□□□ -0.65
CHD7-206ENST00000527900 MAP3K2Q9Y2U5 619 aa10.97□□□□□ -0.65
CHD7-206ENST00000527900 SCN9AQ15858 1988 aa10.97□□□□□ -0.65
CHD7-206ENST00000527900 RAD17O75943 681 aa10.96□□□□□ -0.65
CHD7-206ENST00000527900 HSP90B1P14625 803 aaKnown RBP10.96□□□□□ -0.65
CHD7-206ENST00000527900 TWISTNBQ3B726 338 aaPredicted RBP10.96□□□□□ -0.65
CHD7-206ENST00000527900 DPF2Q92785 391 aa10.96□□□□□ -0.65
CHD7-206ENST00000527900 JARID2Q92833 1246 aaPredicted RBP10.96□□□□□ -0.65
CHD7-206ENST00000527900 KCNQ5Q9NR82 932 aa10.96□□□□□ -0.65
CHD7-206ENST00000527900 POLR2AP24928 1970 aaKnown RBP10.96□□□□□ -0.66
CHD7-206ENST00000527900 MYH3P11055 1940 aa10.96□□□□□ -0.66
CHD7-206ENST00000527900 RTL9Q8NET4 1388 aa10.95□□□□□ -0.66
CHD7-206ENST00000527900 SHTN1A0MZ66 631 aa10.95□□□□□ -0.66
CHD7-206ENST00000527900 H7C1W4 665 aa10.95□□□□□ -0.66
CHD7-206ENST00000527900 TRAF5O00463 557 aa10.95□□□□□ -0.66
CHD7-206ENST00000527900 PSMD14O00487 310 aa10.95□□□□□ -0.66
CHD7-206ENST00000527900 VAMP4O75379 141 aa10.95□□□□□ -0.66
CHD7-206ENST00000527900 SLC4A2P04920 1241 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms