RNA–Protein interactions for RNA: ENST00000527647.5

C9orf135-205, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best) BASIC

Gene C9orf135, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-205ENST00000527647 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.32
C9orf135-205ENST00000527647 CC2D2BQ6DHV5 1058 aa17.08■□□□□ 0.32
C9orf135-205ENST00000527647 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.32
C9orf135-205ENST00000527647 TMEM57Q8N5G2 664 aa17.08■□□□□ 0.32
C9orf135-205ENST00000527647 JARID2Q92833 1246 aaPredicted RBP17.08■□□□□ 0.32
C9orf135-205ENST00000527647 CLUAP1Q96AJ1 413 aa17.08■□□□□ 0.32
C9orf135-205ENST00000527647 KAZALD1Q96I82 304 aa17.08■□□□□ 0.32
C9orf135-205ENST00000527647 DCAF8L1A6NGE4 600 aa17.07■□□□□ 0.32
C9orf135-205ENST00000527647 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
C9orf135-205ENST00000527647 LAMB2P55268 1798 aa17.07■□□□□ 0.32
C9orf135-205ENST00000527647 RLBP1P12271 317 aa17.06■□□□□ 0.32
C9orf135-205ENST00000527647 GRAPQ13588 217 aa17.06■□□□□ 0.32
C9orf135-205ENST00000527647 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
C9orf135-205ENST00000527647 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
C9orf135-205ENST00000527647 GRAPLQ8TC17 118 aaPredicted RBP17.06■□□□□ 0.32
C9orf135-205ENST00000527647 CHMP4BQ9H444 224 aaKnown RBP17.06■□□□□ 0.32
C9orf135-205ENST00000527647 SRCAPQ6ZRS2 3230 aa17.06■□□□□ 0.32
C9orf135-205ENST00000527647 TNRC6CQ9HCJ0 1690 aaKnown RBP17.05■□□□□ 0.32
C9orf135-205ENST00000527647 RPS8P62241 208 aaKnown RBP17.05■□□□□ 0.32
C9orf135-205ENST00000527647 EPHA10Q5JZY3 1008 aa17.05■□□□□ 0.32
C9orf135-205ENST00000527647 SP8Q8IXZ3 490 aa17.05■□□□□ 0.32
C9orf135-205ENST00000527647 SUCLG2Q96I99 432 aa17.05■□□□□ 0.32
C9orf135-205ENST00000527647 BCS1LQ9Y276 419 aa17.05■□□□□ 0.32
C9orf135-205ENST00000527647 UBTFL1P0CB47 393 aaPredicted RBP17.04■□□□□ 0.32
C9orf135-205ENST00000527647 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
C9orf135-205ENST00000527647 GPR162Q16538 588 aa17.04■□□□□ 0.32
C9orf135-205ENST00000527647 PRPF40BQ6NWY9 871 aaKnown RBP17.04■□□□□ 0.32
C9orf135-205ENST00000527647 ARFGEF1Q9Y6D6 1849 aa17.04■□□□□ 0.32
C9orf135-205ENST00000527647 MYH3P11055 1940 aa17.04■□□□□ 0.32
C9orf135-205ENST00000527647 PLIN1O60240 522 aa17.03■□□□□ 0.32
C9orf135-205ENST00000527647 MVPQ14764 893 aaKnown RBP17.03■□□□□ 0.32
C9orf135-205ENST00000527647 LMBR1LQ6UX01 489 aa17.03■□□□□ 0.32
C9orf135-205ENST00000527647 CDC5LQ99459 802 aaKnown RBP17.03■□□□□ 0.32
C9orf135-205ENST00000527647 DDX19BQ9UMR2 479 aa17.03■□□□□ 0.32
C9orf135-205ENST00000527647 ATP6V0A2Q9Y487 856 aa17.03■□□□□ 0.32
C9orf135-205ENST00000527647 COL11A2P13942 1736 aaPredicted RBP17.03■□□□□ 0.32
C9orf135-205ENST00000527647 SLX4Q8IY92 1834 aa17.03■□□□□ 0.32
C9orf135-205ENST00000527647 MTX1Q13505 466 aa17.02■□□□□ 0.32
C9orf135-205ENST00000527647 ANKRD44Q8N8A2 993 aa17.02■□□□□ 0.32
C9orf135-205ENST00000527647 PANK1Q8TE04 598 aa17.02■□□□□ 0.32
C9orf135-205ENST00000527647 MEIS3Q99687 375 aa17.02■□□□□ 0.32
C9orf135-205ENST00000527647 GREM2Q9H772 168 aa17.02■□□□□ 0.32
C9orf135-205ENST00000527647 SEC31BQ9NQW1 1179 aa17.02■□□□□ 0.32
C9orf135-205ENST00000527647 BSDC1Q9NW68 430 aaPredicted RBP17.02■□□□□ 0.32
C9orf135-205ENST00000527647 ANKRD18BA2A2Z9 1011 aa17.01■□□□□ 0.31
C9orf135-205ENST00000527647 ITGA6P23229 1130 aa17.01■□□□□ 0.31
C9orf135-205ENST00000527647 RRP1P56182 461 aaKnown RBP17.01■□□□□ 0.31
C9orf135-205ENST00000527647 RTKN2Q8IZC4 609 aa17.01■□□□□ 0.31
C9orf135-205ENST00000527647 CELF1Q92879 486 aaKnown RBP17.01■□□□□ 0.31
C9orf135-205ENST00000527647 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
C9orf135-205ENST00000527647 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
C9orf135-205ENST00000527647 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
C9orf135-205ENST00000527647 C21orf2O43822 256 aa17■□□□□ 0.31
C9orf135-205ENST00000527647 GNAI2P04899 355 aa17■□□□□ 0.31
C9orf135-205ENST00000527647 IFIT5Q13325 482 aaKnown RBP17■□□□□ 0.31
C9orf135-205ENST00000527647 CCDC57Q2TAC2 916 aa17■□□□□ 0.31
C9orf135-205ENST00000527647 ANKRD18AQ8IVF6 992 aa17■□□□□ 0.31
C9orf135-205ENST00000527647 PPEF1O14829 653 aaPredicted RBP16.99■□□□□ 0.31
C9orf135-205ENST00000527647 ITPRIPQ8IWB1 547 aa16.99■□□□□ 0.31
C9orf135-205ENST00000527647 PSMD1Q99460 953 aa16.99■□□□□ 0.31
C9orf135-205ENST00000527647 TMX4Q9H1E5 349 aaPredicted RBP16.99■□□□□ 0.31
C9orf135-205ENST00000527647 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
C9orf135-205ENST00000527647 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
C9orf135-205ENST00000527647 SNED1Q8TER0 1413 aa16.98■□□□□ 0.31
C9orf135-205ENST00000527647 ATP8B2P98198 1209 aa16.98■□□□□ 0.31
C9orf135-205ENST00000527647 CCDC93Q567U6 631 aa16.98■□□□□ 0.31
C9orf135-205ENST00000527647 RTFDC1Q9BY42 306 aaPredicted RBP16.98■□□□□ 0.31
C9orf135-205ENST00000527647 PODXL2Q9NZ53 605 aa16.98■□□□□ 0.31
C9orf135-205ENST00000527647 COG6Q9Y2V7 657 aa16.98■□□□□ 0.31
C9orf135-205ENST00000527647 IGHMBP2P38935 993 aaKnown RBP16.97■□□□□ 0.31
C9orf135-205ENST00000527647 RFX5P48382 616 aaPredicted RBP16.97■□□□□ 0.31
C9orf135-205ENST00000527647 AAMPQ13685 434 aa16.97■□□□□ 0.31
C9orf135-205ENST00000527647 C20orf194Q5TEA3 1177 aa16.97■□□□□ 0.31
C9orf135-205ENST00000527647 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
C9orf135-205ENST00000527647 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
C9orf135-205ENST00000527647 ARHGAP27Q6ZUM4 889 aa16.96■□□□□ 0.31
C9orf135-205ENST00000527647 TAF1P21675 1872 aa16.96■□□□□ 0.31
C9orf135-205ENST00000527647 FER1L6Q2WGJ9 1857 aa16.95■□□□□ 0.3
C9orf135-205ENST00000527647 FKBP4Q02790 459 aaKnown RBP eCLIP16.95■□□□□ 0.3
C9orf135-205ENST00000527647 RPAP2Q8IXW5 612 aaPredicted RBP16.95■□□□□ 0.3
C9orf135-205ENST00000527647 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
C9orf135-205ENST00000527647 MPNDQ8N594 471 aa16.95■□□□□ 0.3
C9orf135-205ENST00000527647 CCDC85AQ96PX6 553 aaPredicted RBP16.95■□□□□ 0.3
C9orf135-205ENST00000527647 MPHOSPH8Q99549 860 aa16.95■□□□□ 0.3
C9orf135-205ENST00000527647 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
C9orf135-205ENST00000527647 MINPP1Q9UNW1 487 aa16.95■□□□□ 0.3
C9orf135-205ENST00000527647 RIPOR2Q9Y4F9 1068 aa16.95■□□□□ 0.3
C9orf135-205ENST00000527647 SUPT16HQ9Y5B9 1047 aaKnown RBP16.95■□□□□ 0.3
C9orf135-205ENST00000527647 NFKBIEO00221 500 aa16.94■□□□□ 0.3
C9orf135-205ENST00000527647 PTPN12Q05209 780 aaKnown RBP16.94■□□□□ 0.3
C9orf135-205ENST00000527647 LDHAL6AQ6ZMR3 332 aa16.94■□□□□ 0.3
C9orf135-205ENST00000527647 SUPT20HQ8NEM7 779 aa16.94■□□□□ 0.3
C9orf135-205ENST00000527647 ANKRD2Q9GZV1 360 aa16.94■□□□□ 0.3
C9orf135-205ENST00000527647 POLA2Q14181 598 aa16.93■□□□□ 0.3
C9orf135-205ENST00000527647 SSH3Q8TE77 659 aa16.93■□□□□ 0.3
C9orf135-205ENST00000527647 WWC3Q9ULE0 1092 aa16.93■□□□□ 0.3
C9orf135-205ENST00000527647 CIAO1O76071 339 aa16.92■□□□□ 0.3
C9orf135-205ENST00000527647 TAOK3Q9H2K8 898 aa16.92■□□□□ 0.3
C9orf135-205ENST00000527647 LEMD3Q9Y2U8 911 aa16.92■□□□□ 0.3
C9orf135-205ENST00000527647 CHMP3Q9Y3E7 222 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms