RNA–Protein interactions for RNA: ENST00000527103.1

PITPNM1-208, Transcript of phosphatidylinositol transfer protein membrane associated 1, human

TSL 4

Gene PITPNM1, Length 308 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PITPNM1-208	ENST00000527103	ZBED9	Q6R2W3	1325 aa		28.32	■■■□□ 2.12
PITPNM1-208	ENST00000527103	SP8	Q8IXZ3	490 aa		28.31	■■■□□ 2.12
PITPNM1-208	ENST00000527103	DDX60	Q8IY21	1712 aa	Known RBP	28.31	■■■□□ 2.12
PITPNM1-208	ENST00000527103	CCDC152	Q4G0S7	254 aa		28.3	■■■□□ 2.12
PITPNM1-208	ENST00000527103	GRIPAP1	Q4V328	841 aa		28.3	■■■□□ 2.12
PITPNM1-208	ENST00000527103	ZNF526	Q8TF50	670 aa	Predicted RBP	28.3	■■■□□ 2.12
PITPNM1-208	ENST00000527103	LAMB2	P55268	1798 aa		28.29	■■■□□ 2.12
PITPNM1-208	ENST00000527103	RARS	P54136	660 aa	Known RBP	28.29	■■■□□ 2.12
PITPNM1-208	ENST00000527103	CASP7	P55210	303 aa		28.29	■■■□□ 2.12
PITPNM1-208	ENST00000527103	SLC51A	Q86UW1	340 aa		28.29	■■■□□ 2.12
PITPNM1-208	ENST00000527103	CELF1	Q92879	486 aa	Known RBP	28.29	■■■□□ 2.12
PITPNM1-208	ENST00000527103	CCDC85A	Q96PX6	553 aa	Predicted RBP	28.29	■■■□□ 2.12
PITPNM1-208	ENST00000527103	SRCIN1	Q9C0H9	1055 aa		28.29	■■■□□ 2.12
PITPNM1-208	ENST00000527103	SBF1	O95248	1867 aa		28.28	■■■□□ 2.12
PITPNM1-208	ENST00000527103	FER1L6	Q2WGJ9	1857 aa		28.28	■■■□□ 2.12
PITPNM1-208	ENST00000527103	ALDH1L1	O75891	902 aa		28.28	■■■□□ 2.12
PITPNM1-208	ENST00000527103	ZNF277	Q9NRM2	450 aa	Predicted RBP	28.28	■■■□□ 2.12
PITPNM1-208	ENST00000527103	RPS8	P62241	208 aa	Known RBP	28.27	■■■□□ 2.12
PITPNM1-208	ENST00000527103	TMC4	Q7Z404	712 aa		28.27	■■■□□ 2.12
PITPNM1-208	ENST00000527103	PSMD1	Q99460	953 aa		28.27	■■■□□ 2.12
PITPNM1-208	ENST00000527103	SEC31B	Q9NQW1	1179 aa		28.27	■■■□□ 2.12
PITPNM1-208	ENST00000527103	BRPF1	P55201	1214 aa	Predicted RBP	28.26	■■■□□ 2.11
PITPNM1-208	ENST00000527103	CTSW	P56202	376 aa		28.26	■■■□□ 2.11
PITPNM1-208	ENST00000527103	TTLL11	Q8NHH1	800 aa		28.26	■■■□□ 2.11
PITPNM1-208	ENST00000527103	PLA2G12B	Q9BX93	195 aa		28.26	■■■□□ 2.11
PITPNM1-208	ENST00000527103	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.26	■■■□□ 2.11
PITPNM1-208	ENST00000527103	NOB1	Q9ULX3	412 aa	Known RBP	28.26	■■■□□ 2.11
PITPNM1-208	ENST00000527103	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.25	■■■□□ 2.11
PITPNM1-208	ENST00000527103	SNED1	Q8TER0	1413 aa		28.25	■■■□□ 2.11
PITPNM1-208	ENST00000527103	ZC3H4	Q9UPT8	1303 aa	Known RBP	28.23	■■■□□ 2.11
PITPNM1-208	ENST00000527103	GRM8	O00222	908 aa		28.23	■■■□□ 2.11
PITPNM1-208	ENST00000527103	IARS	P41252	1262 aa	Known RBP	28.23	■■■□□ 2.11
PITPNM1-208	ENST00000527103	MPND	Q8N594	471 aa		28.23	■■■□□ 2.11
PITPNM1-208	ENST00000527103	DPP8	Q6V1X1	898 aa	Predicted RBP	28.21	■■■□□ 2.11
PITPNM1-208	ENST00000527103	GREM2	Q9H772	168 aa		28.21	■■■□□ 2.11
PITPNM1-208	ENST00000527103	CSF1R	P07333	972 aa		28.2	■■■□□ 2.1
PITPNM1-208	ENST00000527103	TAF1	P21675	1872 aa		28.2	■■■□□ 2.1
PITPNM1-208	ENST00000527103	CCDC88A	Q3V6T2	1871 aa		28.19	■■■□□ 2.1
PITPNM1-208	ENST00000527103	ANKRD18A	Q8IVF6	992 aa		28.19	■■■□□ 2.1
PITPNM1-208	ENST00000527103	API5	Q9BZZ5	524 aa	Known RBP	28.19	■■■□□ 2.1
PITPNM1-208	ENST00000527103	KDM2B	Q8NHM5	1336 aa		28.18	■■■□□ 2.1
PITPNM1-208	ENST00000527103	BCAR3	O75815	825 aa		28.18	■■■□□ 2.1
PITPNM1-208	ENST00000527103	FOXO4	P98177	505 aa		28.18	■■■□□ 2.1
PITPNM1-208	ENST00000527103	SUPT20H	Q8NEM7	779 aa		28.18	■■■□□ 2.1
PITPNM1-208	ENST00000527103	CDC5L	Q99459	802 aa	Known RBP	28.18	■■■□□ 2.1
PITPNM1-208	ENST00000527103	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.18	■■■□□ 2.1
PITPNM1-208	ENST00000527103	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.18	■■■□□ 2.1
PITPNM1-208	ENST00000527103	RTL9	Q8NET4	1388 aa		28.17	■■■□□ 2.1
PITPNM1-208	ENST00000527103	GLTPD2	A6NH11	291 aa		28.17	■■■□□ 2.1
PITPNM1-208	ENST00000527103	DPY19L2	Q6NUT2	758 aa		28.17	■■■□□ 2.1
PITPNM1-208	ENST00000527103	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.16	■■■□□ 2.1
PITPNM1-208	ENST00000527103	ARHGAP45	Q92619	1136 aa		28.16	■■■□□ 2.1
PITPNM1-208	ENST00000527103	COL4A1	P02462	1669 aa		28.16	■■■□□ 2.1
PITPNM1-208	ENST00000527103	GPSM2	P81274	684 aa		28.15	■■■□□ 2.1
PITPNM1-208	ENST00000527103	LARGE2	Q8N3Y3	721 aa		28.15	■■■□□ 2.1
PITPNM1-208	ENST00000527103	JDP2	Q8WYK2	163 aa		28.15	■■■□□ 2.1
PITPNM1-208	ENST00000527103	VPS33B	Q9H267	617 aa		28.15	■■■□□ 2.1
PITPNM1-208	ENST00000527103	NMRK2	Q9NPI5	230 aa		28.15	■■■□□ 2.1
PITPNM1-208	ENST00000527103	UTY	O14607	1347 aa		28.15	■■■□□ 2.1
PITPNM1-208	ENST00000527103	KIF16B	Q96L93	1317 aa		28.15	■■■□□ 2.1
PITPNM1-208	ENST00000527103	IPO8	O15397	1037 aa	Known RBP	28.14	■■■□□ 2.1
PITPNM1-208	ENST00000527103	ITGA6	P23229	1130 aa		28.14	■■■□□ 2.1
PITPNM1-208	ENST00000527103	CCT4	P50991	539 aa	Known RBP	28.14	■■■□□ 2.1
PITPNM1-208	ENST00000527103	FAM161A	Q3B820	660 aa		28.14	■■■□□ 2.1
PITPNM1-208	ENST00000527103	EPHA10	Q5JZY3	1008 aa		28.14	■■■□□ 2.1
PITPNM1-208	ENST00000527103	PPIP5K2	O43314	1243 aa		28.13	■■■□□ 2.09
PITPNM1-208	ENST00000527103	LMBR1L	Q6UX01	489 aa		28.13	■■■□□ 2.09
PITPNM1-208	ENST00000527103	USP44	Q9H0E7	712 aa		28.13	■■■□□ 2.09
PITPNM1-208	ENST00000527103	RRAGC	Q9HB90	399 aa		28.13	■■■□□ 2.09
PITPNM1-208	ENST00000527103	AOC3	Q16853	763 aa		28.12	■■■□□ 2.09
PITPNM1-208	ENST00000527103	FRAT1	Q92837	279 aa	Predicted RBP	28.12	■■■□□ 2.09
PITPNM1-208	ENST00000527103	SUCLG2	Q96I99	432 aa		28.12	■■■□□ 2.09
PITPNM1-208	ENST00000527103	BSDC1	Q9NW68	430 aa	Predicted RBP	28.12	■■■□□ 2.09
PITPNM1-208	ENST00000527103	CHMP3	Q9Y3E7	222 aa		28.12	■■■□□ 2.09
PITPNM1-208	ENST00000527103	DICER1	Q9UPY3	1922 aa	Known RBP	28.12	■■■□□ 2.09
PITPNM1-208	ENST00000527103	ANKRD18B	A2A2Z9	1011 aa		28.11	■■■□□ 2.09
PITPNM1-208	ENST00000527103	FZD9	O00144	591 aa		28.11	■■■□□ 2.09
PITPNM1-208	ENST00000527103	KIF3C	O14782	793 aa		28.11	■■■□□ 2.09
PITPNM1-208	ENST00000527103	IGHMBP2	P38935	993 aa	Known RBP	28.11	■■■□□ 2.09
PITPNM1-208	ENST00000527103	KAZALD1	Q96I82	304 aa		28.11	■■■□□ 2.09
PITPNM1-208	ENST00000527103	C6orf229	H3BNL8	230 aa		28.1	■■■□□ 2.09
PITPNM1-208	ENST00000527103	DDN	O94850	711 aa	Predicted RBP	28.1	■■■□□ 2.09
PITPNM1-208	ENST00000527103	IFIT5	Q13325	482 aa	Known RBP	28.1	■■■□□ 2.09
PITPNM1-208	ENST00000527103	PODXL2	Q9NZ53	605 aa		28.1	■■■□□ 2.09
PITPNM1-208	ENST00000527103	ANKIB1	Q9P2G1	1089 aa		28.1	■■■□□ 2.09
PITPNM1-208	ENST00000527103	POLL	Q9UGP5	575 aa		28.1	■■■□□ 2.09
PITPNM1-208	ENST00000527103	KIAA2012	Q0VF49	1180 aa		28.09	■■■□□ 2.09
PITPNM1-208	ENST00000527103	NIM1K	Q8IY84	436 aa		28.09	■■■□□ 2.09
PITPNM1-208	ENST00000527103	TBC1D16	Q8TBP0	767 aa		28.09	■■■□□ 2.09
PITPNM1-208	ENST00000527103	MINPP1	Q9UNW1	487 aa		28.09	■■■□□ 2.09
PITPNM1-208	ENST00000527103	WASHC4	Q2M389	1173 aa		28.08	■■■□□ 2.09
PITPNM1-208	ENST00000527103	TIAM2	Q8IVF5	1701 aa		28.08	■■■□□ 2.09
PITPNM1-208	ENST00000527103	MYH3	P11055	1940 aa		28.08	■■■□□ 2.09
PITPNM1-208	ENST00000527103	EIF6	P56537	245 aa	Known RBP	28.07	■■■□□ 2.08
PITPNM1-208	ENST00000527103	C1QTNF8	P60827	252 aa		28.07	■■■□□ 2.08
PITPNM1-208	ENST00000527103	CCDC57	Q2TAC2	916 aa		28.07	■■■□□ 2.08
PITPNM1-208	ENST00000527103	ATF7IP	Q6VMQ6	1270 aa		28.07	■■■□□ 2.08
PITPNM1-208	ENST00000527103	MPHOSPH8	Q99549	860 aa		28.07	■■■□□ 2.08
PITPNM1-208	ENST00000527103	GGA1	Q9UJY5	639 aa		28.06	■■■□□ 2.08
PITPNM1-208	ENST00000527103	ZNF541	Q9H0D2	1346 aa		28.06	■■■□□ 2.08

Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms