RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 ATP6V0A2Q9Y487 856 aa18.28■□□□□ 0.52
NXF1-204ENST00000527064 TIAM2Q8IVF5 1701 aa18.28■□□□□ 0.52
NXF1-204ENST00000527064 BEND3Q5T5X7 828 aa18.27■□□□□ 0.52
NXF1-204ENST00000527064 UBE3BQ7Z3V4 1068 aa18.27■□□□□ 0.52
NXF1-204ENST00000527064 PSMD1Q99460 953 aa18.27■□□□□ 0.52
NXF1-204ENST00000527064 BCL2L13Q9BXK5 485 aa18.27■□□□□ 0.52
NXF1-204ENST00000527064 GPBP1L1Q9HC44 474 aaPredicted RBP18.27■□□□□ 0.52
NXF1-204ENST00000527064 SNED1Q8TER0 1413 aa18.26■□□□□ 0.51
NXF1-204ENST00000527064 H7C1W4 665 aa18.26■□□□□ 0.51
NXF1-204ENST00000527064 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
NXF1-204ENST00000527064 CTSWP56202 376 aa18.26■□□□□ 0.51
NXF1-204ENST00000527064 SLC4A10Q6U841 1118 aa18.26■□□□□ 0.51
NXF1-204ENST00000527064 OLFM4Q6UX06 510 aa18.26■□□□□ 0.51
NXF1-204ENST00000527064 JARID2Q92833 1246 aaPredicted RBP18.26■□□□□ 0.51
NXF1-204ENST00000527064 PRELPP51888 382 aa18.25■□□□□ 0.51
NXF1-204ENST00000527064 SP8Q8IXZ3 490 aa18.25■□□□□ 0.51
NXF1-204ENST00000527064 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
NXF1-204ENST00000527064 BRPF1P55201 1214 aaPredicted RBP18.24■□□□□ 0.51
NXF1-204ENST00000527064 ZNF526Q8TF50 670 aaPredicted RBP18.24■□□□□ 0.51
NXF1-204ENST00000527064 PLA2G12BQ9BX93 195 aa18.24■□□□□ 0.51
NXF1-204ENST00000527064 KDM2BQ8NHM5 1336 aa18.23■□□□□ 0.51
NXF1-204ENST00000527064 KIF16BQ96L93 1317 aa18.23■□□□□ 0.51
NXF1-204ENST00000527064 LRRC37AA6NMS7 1700 aa18.23■□□□□ 0.51
NXF1-204ENST00000527064 MYH3P11055 1940 aa18.23■□□□□ 0.51
NXF1-204ENST00000527064 DICER1Q9UPY3 1922 aaKnown RBP18.23■□□□□ 0.51
NXF1-204ENST00000527064 CCDC88AQ3V6T2 1871 aa18.23■□□□□ 0.51
NXF1-204ENST00000527064 RTL9Q8NET4 1388 aa18.23■□□□□ 0.51
NXF1-204ENST00000527064 RARSP54136 660 aaKnown RBP18.23■□□□□ 0.51
NXF1-204ENST00000527064 SUPT20HQ8NEM7 779 aa18.23■□□□□ 0.51
NXF1-204ENST00000527064 ZNF277Q9NRM2 450 aaPredicted RBP18.23■□□□□ 0.51
NXF1-204ENST00000527064 IARSP41252 1262 aaKnown RBP18.22■□□□□ 0.51
NXF1-204ENST00000527064 CASP7P55210 303 aa18.22■□□□□ 0.51
NXF1-204ENST00000527064 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
NXF1-204ENST00000527064 CDC5LQ99459 802 aaKnown RBP18.22■□□□□ 0.51
NXF1-204ENST00000527064 C9orf78Q9NZ63 289 aaPredicted RBP18.22■□□□□ 0.51
NXF1-204ENST00000527064 GRM8O00222 908 aa18.21■□□□□ 0.51
NXF1-204ENST00000527064 RPS8P62241 208 aaKnown RBP18.21■□□□□ 0.51
NXF1-204ENST00000527064 DPP8Q6V1X1 898 aaPredicted RBP18.21■□□□□ 0.51
NXF1-204ENST00000527064 TTLL11Q8NHH1 800 aa18.21■□□□□ 0.51
NXF1-204ENST00000527064 DPY19L2Q6NUT2 758 aa18.2■□□□□ 0.5
NXF1-204ENST00000527064 ANKRD18AQ8IVF6 992 aa18.2■□□□□ 0.5
NXF1-204ENST00000527064 MPNDQ8N594 471 aa18.2■□□□□ 0.5
NXF1-204ENST00000527064 CCDC85AQ96PX6 553 aaPredicted RBP18.2■□□□□ 0.5
NXF1-204ENST00000527064 API5Q9BZZ5 524 aaKnown RBP18.2■□□□□ 0.5
NXF1-204ENST00000527064 VPS33BQ9H267 617 aa18.2■□□□□ 0.5
NXF1-204ENST00000527064 SEC31BQ9NQW1 1179 aa18.2■□□□□ 0.5
NXF1-204ENST00000527064 GLTPD2A6NH11 291 aa18.19■□□□□ 0.5
NXF1-204ENST00000527064 TAF1P21675 1872 aa18.19■□□□□ 0.5
NXF1-204ENST00000527064 JDP2Q8WYK2 163 aa18.19■□□□□ 0.5
NXF1-204ENST00000527064 RTFDC1Q9BY42 306 aaPredicted RBP18.19■□□□□ 0.5
NXF1-204ENST00000527064 GREM2Q9H772 168 aa18.19■□□□□ 0.5
NXF1-204ENST00000527064 NOB1Q9ULX3 412 aaKnown RBP18.19■□□□□ 0.5
NXF1-204ENST00000527064 ARHGAP45Q92619 1136 aa18.18■□□□□ 0.5
NXF1-204ENST00000527064 IPO8O15397 1037 aaKnown RBP18.17■□□□□ 0.5
NXF1-204ENST00000527064 CCT4P50991 539 aaKnown RBP18.17■□□□□ 0.5
NXF1-204ENST00000527064 SLC51AQ86UW1 340 aa18.17■□□□□ 0.5
NXF1-204ENST00000527064 LARGE2Q8N3Y3 721 aa18.17■□□□□ 0.5
NXF1-204ENST00000527064 COL4A1P02462 1669 aa18.17■□□□□ 0.5
NXF1-204ENST00000527064 UTYO14607 1347 aa18.17■□□□□ 0.5
NXF1-204ENST00000527064 PPIP5K2O43314 1243 aa18.16■□□□□ 0.5
NXF1-204ENST00000527064 CSF1RP07333 972 aa18.16■□□□□ 0.5
NXF1-204ENST00000527064 ITGA6P23229 1130 aa18.16■□□□□ 0.5
NXF1-204ENST00000527064 IGHMBP2P38935 993 aaKnown RBP18.16■□□□□ 0.5
NXF1-204ENST00000527064 FAM161AQ3B820 660 aa18.16■□□□□ 0.5
NXF1-204ENST00000527064 NSFL1CQ9UNZ2 370 aaKnown RBP18.16■□□□□ 0.5
NXF1-204ENST00000527064 DUOX1Q9NRD9 1551 aa18.16■□□□□ 0.5
NXF1-204ENST00000527064 NIM1KQ8IY84 436 aa18.15■□□□□ 0.5
NXF1-204ENST00000527064 BSDC1Q9NW68 430 aaPredicted RBP18.15■□□□□ 0.5
NXF1-204ENST00000527064 LTBP1Q14766 1721 aa18.15■□□□□ 0.5
NXF1-204ENST00000527064 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 FZD9O00144 591 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 GPSM2P81274 684 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 FOXO4P98177 505 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 KIAA2012Q0VF49 1180 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 IFIT5Q13325 482 aaKnown RBP18.14■□□□□ 0.49
NXF1-204ENST00000527064 AOC3Q16853 763 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 EYA3Q99504 573 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 MPHOSPH8Q99549 860 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 NMRK2Q9NPI5 230 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 PODXL2Q9NZ53 605 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 ANKIB1Q9P2G1 1089 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 CHMP3Q9Y3E7 222 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 WDR90Q96KV7 1748 aa18.14■□□□□ 0.49
NXF1-204ENST00000527064 NBPF7P0C2Y1 421 aaPredicted RBP18.13■□□□□ 0.49
NXF1-204ENST00000527064 EIF6P56537 245 aaKnown RBP18.13■□□□□ 0.49
NXF1-204ENST00000527064 XDHP47989 1333 aa18.13■□□□□ 0.49
NXF1-204ENST00000527064 SPEF2Q9C093 1822 aa18.12■□□□□ 0.49
NXF1-204ENST00000527064 C6orf229H3BNL8 230 aa18.12■□□□□ 0.49
NXF1-204ENST00000527064 KIF3CO14782 793 aa18.12■□□□□ 0.49
NXF1-204ENST00000527064 BCAR3O75815 825 aa18.12■□□□□ 0.49
NXF1-204ENST00000527064 WASHC4Q2M389 1173 aa18.12■□□□□ 0.49
NXF1-204ENST00000527064 CCDC57Q2TAC2 916 aa18.12■□□□□ 0.49
NXF1-204ENST00000527064 LMBR1LQ6UX01 489 aa18.12■□□□□ 0.49
NXF1-204ENST00000527064 C16orf71Q8IYS4 520 aaPredicted RBP18.12■□□□□ 0.49
NXF1-204ENST00000527064 FRAT1Q92837 279 aaPredicted RBP18.12■□□□□ 0.49
NXF1-204ENST00000527064 SUCLG2Q96I99 432 aa18.12■□□□□ 0.49
NXF1-204ENST00000527064 GGA1Q9UJY5 639 aa18.12■□□□□ 0.49
NXF1-204ENST00000527064 COL4A5P29400 1685 aa18.12■□□□□ 0.49
NXF1-204ENST00000527064 UFL1O94874 794 aa18.11■□□□□ 0.49
NXF1-204ENST00000527064 TAF7LQ5H9L4 462 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms