RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 NUTM1Q86Y26 1132 aa25.16■■□□□ 1.62
SMCO4-203ENST00000526869 SYNE4Q8N205 404 aa25.16■■□□□ 1.62
SMCO4-203ENST00000526869 GPR108Q9NPR9 543 aa25.16■■□□□ 1.62
SMCO4-203ENST00000526869 LRP5O75197 1615 aa25.15■■□□□ 1.62
SMCO4-203ENST00000526869 IFIT2P09913 472 aaKnown RBP25.15■■□□□ 1.62
SMCO4-203ENST00000526869 SDSP20132 328 aa25.15■■□□□ 1.62
SMCO4-203ENST00000526869 SSFA2P28290 1259 aa25.15■■□□□ 1.62
SMCO4-203ENST00000526869 ATG9AQ7Z3C6 839 aa25.15■■□□□ 1.62
SMCO4-203ENST00000526869 BCL11AQ9H165 835 aa25.15■■□□□ 1.62
SMCO4-203ENST00000526869 RFC4P35249 363 aa25.14■■□□□ 1.62
SMCO4-203ENST00000526869 AACSQ86V21 672 aa25.14■■□□□ 1.62
SMCO4-203ENST00000526869 AMIGO3Q86WK7 504 aa25.14■■□□□ 1.62
SMCO4-203ENST00000526869 NYXQ9GZU5 481 aa25.14■■□□□ 1.62
SMCO4-203ENST00000526869 UPF2Q9HAU5 1272 aaKnown RBP25.14■■□□□ 1.62
SMCO4-203ENST00000526869 ERC2O15083 957 aa25.13■■□□□ 1.61
SMCO4-203ENST00000526869 APBA3O96018 575 aa25.13■■□□□ 1.61
SMCO4-203ENST00000526869 PROM2Q8N271 834 aa25.13■■□□□ 1.61
SMCO4-203ENST00000526869 PI4K2BQ8TCG2 481 aa25.13■■□□□ 1.61
SMCO4-203ENST00000526869 EAF2Q96CJ1 260 aaPredicted RBP25.13■■□□□ 1.61
SMCO4-203ENST00000526869 ECHDC1Q9NTX5 307 aa25.13■■□□□ 1.61
SMCO4-203ENST00000526869 SRP68Q9UHB9 627 aaKnown RBP25.13■■□□□ 1.61
SMCO4-203ENST00000526869 ANKRD18BA2A2Z9 1011 aa25.12■■□□□ 1.61
SMCO4-203ENST00000526869 GLRX3O76003 335 aaKnown RBP25.12■■□□□ 1.61
SMCO4-203ENST00000526869 TFCP2Q12800 502 aa25.12■■□□□ 1.61
SMCO4-203ENST00000526869 TBC1D9BQ66K14 1250 aa25.12■■□□□ 1.61
SMCO4-203ENST00000526869 TBC1D9Q6ZT07 1266 aa25.12■■□□□ 1.61
SMCO4-203ENST00000526869 EP400Q96L91 3159 aa25.11■■□□□ 1.61
SMCO4-203ENST00000526869 SEC24BO95487 1268 aa25.11■■□□□ 1.61
SMCO4-203ENST00000526869 ANP32AP39687 249 aaKnown RBP25.11■■□□□ 1.61
SMCO4-203ENST00000526869 TNNI3KQ59H18 835 aa25.11■■□□□ 1.61
SMCO4-203ENST00000526869 SETDB2Q96T68 719 aa25.11■■□□□ 1.61
SMCO4-203ENST00000526869 GREM2Q9H772 168 aa25.11■■□□□ 1.61
SMCO4-203ENST00000526869 FPGT-TNNI3KV9GXZ4 949 aa25.11■■□□□ 1.61
SMCO4-203ENST00000526869 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.1■■□□□ 1.61
SMCO4-203ENST00000526869 ITGA6P23229 1130 aa25.1■■□□□ 1.61
SMCO4-203ENST00000526869 TAF7LQ5H9L4 462 aa25.1■■□□□ 1.61
SMCO4-203ENST00000526869 SLC10A5Q5PT55 438 aa25.1■■□□□ 1.61
SMCO4-203ENST00000526869 CCDC152Q4G0S7 254 aa25.09■■□□□ 1.61
SMCO4-203ENST00000526869 TSHZ3Q63HK5 1081 aa25.09■■□□□ 1.61
SMCO4-203ENST00000526869 CASC1Q6TDU7 716 aa25.09■■□□□ 1.61
SMCO4-203ENST00000526869 SMIM5Q71RC9 77 aa25.09■■□□□ 1.61
SMCO4-203ENST00000526869 ZNF594Q96JF6 807 aaPredicted RBP25.09■■□□□ 1.61
SMCO4-203ENST00000526869 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.09■■□□□ 1.61
SMCO4-203ENST00000526869 PHF14O94880 888 aa25.08■■□□□ 1.61
SMCO4-203ENST00000526869 HCLS1P14317 486 aaPredicted RBP25.08■■□□□ 1.61
SMCO4-203ENST00000526869 ZNF609O15014 1411 aa25.08■■□□□ 1.61
SMCO4-203ENST00000526869 CARMIL3Q8ND23 1372 aa25.07■■□□□ 1.6
SMCO4-203ENST00000526869 FAM177BA6PVY3 158 aa25.07■■□□□ 1.6
SMCO4-203ENST00000526869 LRRC24Q50LG9 513 aa25.07■■□□□ 1.6
SMCO4-203ENST00000526869 SF3B3Q15393 1217 aaKnown RBP25.06■■□□□ 1.6
SMCO4-203ENST00000526869 CCDC8Q9H0W5 538 aaPredicted RBP25.06■■□□□ 1.6
SMCO4-203ENST00000526869 CEP126Q9P2H0 1117 aa25.06■■□□□ 1.6
SMCO4-203ENST00000526869 RIC1Q4ADV7 1423 aa25.05■■□□□ 1.6
SMCO4-203ENST00000526869 ERFEQ4G0M1 354 aa25.05■■□□□ 1.6
SMCO4-203ENST00000526869 AKT1S1Q96B36 256 aa25.05■■□□□ 1.6
SMCO4-203ENST00000526869 CCDC85AQ96PX6 553 aaPredicted RBP25.05■■□□□ 1.6
SMCO4-203ENST00000526869 PUS3Q9BZE2 481 aaKnown RBP25.05■■□□□ 1.6
SMCO4-203ENST00000526869 AKAP2Q9Y2D5 859 aa25.05■■□□□ 1.6
SMCO4-203ENST00000526869 RIPOR2Q9Y4F9 1068 aa25.05■■□□□ 1.6
SMCO4-203ENST00000526869 TPTE2Q6XPS3 522 aa25.04■■□□□ 1.6
SMCO4-203ENST00000526869 LDHAL6AQ6ZMR3 332 aa25.04■■□□□ 1.6
SMCO4-203ENST00000526869 BICDL1Q6ZP65 573 aa25.04■■□□□ 1.6
SMCO4-203ENST00000526869 NBPF5PQ86XG9 351 aaPredicted RBP25.04■■□□□ 1.6
SMCO4-203ENST00000526869 CNTROBQ8N137 903 aa25.04■■□□□ 1.6
SMCO4-203ENST00000526869 TBC1D32Q96NH3 1257 aa25.04■■□□□ 1.6
SMCO4-203ENST00000526869 TLR7Q9NYK1 1049 aaKnown RBP25.04■■□□□ 1.6
SMCO4-203ENST00000526869 DBNLQ9UJU6 430 aaKnown RBP25.04■■□□□ 1.6
SMCO4-203ENST00000526869 AK9Q5TCS8 1911 aa25.04■■□□□ 1.6
SMCO4-203ENST00000526869 TRIM6-TRIM34B2RNG4 842 aa25.03■■□□□ 1.6
SMCO4-203ENST00000526869 FLAD1Q8NFF5 587 aa25.03■■□□□ 1.6
SMCO4-203ENST00000526869 ABCC12Q96J65 1359 aa25.03■■□□□ 1.6
SMCO4-203ENST00000526869 CASZ1Q86V15 1759 aa25.03■■□□□ 1.6
SMCO4-203ENST00000526869 GYS1P13807 737 aa25.02■■□□□ 1.6
SMCO4-203ENST00000526869 ATP5JP18859 108 aa25.02■■□□□ 1.6
SMCO4-203ENST00000526869 MFAP1P55081 439 aaKnown RBP25.02■■□□□ 1.6
SMCO4-203ENST00000526869 GTF2E1P29083 439 aaPredicted RBP25.01■■□□□ 1.59
SMCO4-203ENST00000526869 NFIXQ14938 502 aa25.01■■□□□ 1.59
SMCO4-203ENST00000526869 CNNM1Q9NRU3 951 aa25.01■■□□□ 1.59
SMCO4-203ENST00000526869 MROH5Q6ZUA9 1318 aa25.01■■□□□ 1.59
SMCO4-203ENST00000526869 RILPL2Q969X0 211 aa25■■□□□ 1.59
SMCO4-203ENST00000526869 CDC5LQ99459 802 aaKnown RBP25■■□□□ 1.59
SMCO4-203ENST00000526869 ZNF827Q17R98 1081 aa24.99■■□□□ 1.59
SMCO4-203ENST00000526869 METTL24Q5JXM2 366 aa24.99■■□□□ 1.59
SMCO4-203ENST00000526869 EVI5LQ96CN4 794 aa24.99■■□□□ 1.59
SMCO4-203ENST00000526869 DBNDD2Q9BQY9 259 aa24.99■■□□□ 1.59
SMCO4-203ENST00000526869 A0A1B0GUL7 405 aa24.98■■□□□ 1.59
SMCO4-203ENST00000526869 CHMLP26374 656 aa24.98■■□□□ 1.59
SMCO4-203ENST00000526869 C22orf23Q9BZE7 217 aa24.98■■□□□ 1.59
SMCO4-203ENST00000526869 TM4SF1P30408 202 aa24.97■■□□□ 1.59
SMCO4-203ENST00000526869 IGHMBP2P38935 993 aaKnown RBP24.97■■□□□ 1.59
SMCO4-203ENST00000526869 VGLL2Q8N8G2 317 aa24.97■■□□□ 1.59
SMCO4-203ENST00000526869 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.97■■□□□ 1.59
SMCO4-203ENST00000526869 NLRP3Q96P20 1036 aa24.97■■□□□ 1.59
SMCO4-203ENST00000526869 TFCP2L1Q9NZI6 479 aa24.97■■□□□ 1.59
SMCO4-203ENST00000526869 ARAP2Q8WZ64 1704 aa24.97■■□□□ 1.59
SMCO4-203ENST00000526869 RBM25P49756 843 aaKnown RBP24.96■■□□□ 1.59
SMCO4-203ENST00000526869 TICAM2Q86XR7 235 aa24.96■■□□□ 1.59
SMCO4-203ENST00000526869 DDRGK1Q96HY6 314 aa24.96■■□□□ 1.59
SMCO4-203ENST00000526869 MPHOSPH8Q99549 860 aa24.96■■□□□ 1.59
SMCO4-203ENST00000526869 SEC31BQ9NQW1 1179 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms