RNA–Protein interactions for RNA: ENST00000526664.5

PDE4DIP-223, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-223	ENST00000526664	MYH3	P11055	1940 aa		12.44	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	PDE8A	O60658	829 aa		12.43	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	GRAP	Q13588	217 aa		12.43	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	GRAPL	Q8TC17	118 aa	Predicted RBP	12.43	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	PSMD1	Q99460	953 aa		12.43	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	TAOK3	Q9H2K8	898 aa		12.43	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	SEC31B	Q9NQW1	1179 aa		12.43	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	ZBED9	Q6R2W3	1325 aa		12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	PPEF1	O14829	653 aa	Predicted RBP	12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	BBOX1	O75936	387 aa		12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	RARS	P54136	660 aa	Known RBP	12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	NEXN	Q0ZGT2	675 aa		12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	CC2D2B	Q6DHV5	1058 aa		12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	SP8	Q8IXZ3	490 aa		12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	TTLL11	Q8NHH1	800 aa		12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	BCL2L13	Q9BXK5	485 aa		12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	RTL9	Q8NET4	1388 aa		12.42	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	KIF3C	O14782	793 aa		12.41	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	CSF1R	P07333	972 aa		12.41	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	DDX46	Q7L014	1031 aa	Known RBP	12.41	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	UBE3B	Q7Z3V4	1068 aa		12.41	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	RTKN2	Q8IZC4	609 aa		12.41	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	KAZALD1	Q96I82	304 aa		12.41	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	UTY	O14607	1347 aa		12.4	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	PTPRC	P08575	1304 aa		12.4	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	POTEC	B2RU33	542 aa		12.4	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	CTSW	P56202	376 aa		12.4	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	FOXO4	P98177	505 aa		12.4	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	EPHA10	Q5JZY3	1008 aa		12.4	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.4	□□□□□ -0.42
PDE4DIP-223	ENST00000526664	ALDH1L1	O75891	902 aa		12.39	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	RPS8	P62241	208 aa	Known RBP	12.39	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	GREM2	Q9H772	168 aa		12.39	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	NMRK2	Q9NPI5	230 aa		12.39	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	WDR90	Q96KV7	1748 aa		12.38	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	GLTPD2	A6NH11	291 aa		12.38	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	FZD9	O00144	591 aa		12.38	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	IARS	P41252	1262 aa	Known RBP	12.38	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	GRIPAP1	Q4V328	841 aa		12.38	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	ZNF526	Q8TF50	670 aa	Predicted RBP	12.38	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	CCDC85A	Q96PX6	553 aa	Predicted RBP	12.38	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	SRCIN1	Q9C0H9	1055 aa		12.38	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	SMC4	Q9NTJ3	1288 aa		12.38	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	GRM8	O00222	908 aa		12.37	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.37	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	HSP90B1	P14625	803 aa	Known RBP	12.37	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	CCDC152	Q4G0S7	254 aa		12.37	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	TMC4	Q7Z404	712 aa		12.37	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	USP44	Q9H0E7	712 aa		12.37	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.37	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	PODXL2	Q9NZ53	605 aa		12.37	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	NOB1	Q9ULX3	412 aa	Known RBP	12.37	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	WTIP	A6NIX2	430 aa	Predicted RBP	12.36	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	GPSM2	P81274	684 aa		12.36	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	SLC4A10	Q6U841	1118 aa		12.36	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	MPND	Q8N594	471 aa		12.36	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	POLL	Q9UGP5	575 aa		12.36	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	TNN	Q9UQP3	1299 aa		12.36	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	ZNF541	Q9H0D2	1346 aa		12.36	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	SPEF2	Q9C093	1822 aa		12.35	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	BCAR3	O75815	825 aa		12.35	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	KIAA2012	Q0VF49	1180 aa		12.35	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	FAM161A	Q3B820	660 aa		12.35	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	SUCLG2	Q96I99	432 aa		12.35	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	VPS33B	Q9H267	617 aa		12.35	□□□□□ -0.43
PDE4DIP-223	ENST00000526664		A0A1B0GUL6	1792 aa		12.34	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	DDN	O94850	711 aa	Predicted RBP	12.34	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	AOC3	Q16853	763 aa		12.34	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	RABL6	Q3YEC7	729 aa	Predicted RBP	12.34	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	DPP8	Q6V1X1	898 aa	Predicted RBP	12.34	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	ANKRD44	Q8N8A2	993 aa		12.34	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	ARHGAP45	Q92619	1136 aa		12.34	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	BSDC1	Q9NW68	430 aa	Predicted RBP	12.34	□□□□□ -0.43
PDE4DIP-223	ENST00000526664	SCN9A	Q15858	1988 aa		12.33	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	ITGA6	P23229	1130 aa		12.33	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	LMBR1L	Q6UX01	489 aa		12.33	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	TBC1D16	Q8TBP0	767 aa		12.33	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.33	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	RRAGC	Q9HB90	399 aa		12.33	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	MINPP1	Q9UNW1	487 aa		12.33	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	KDM2B	Q8NHM5	1336 aa		12.33	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	YDJC	A8MPS7	323 aa		12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	PPIP5K2	O43314	1243 aa		12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	TRIM27	P14373	513 aa		12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	C1QTNF8	P60827	252 aa		12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	INTS3	Q68E01	1043 aa	Known RBP	12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	ANKRD18A	Q8IVF6	992 aa		12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	LARGE2	Q8N3Y3	721 aa		12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	GPR101	Q96P66	508 aa	Predicted RBP	12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	CDC5L	Q99459	802 aa	Known RBP	12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	KIF16B	Q96L93	1317 aa		12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	IRS2	Q9Y4H2	1338 aa		12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	ZNF646	O15015	1829 aa	Predicted RBP	12.32	□□□□□ -0.44
PDE4DIP-223	ENST00000526664	SCN4A	P35499	1836 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms