RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ALX3O95076 343 aa6.75□□□□□ -1.33
ECHDC1-219ENST00000526299 EPB42P16452 691 aa6.75□□□□□ -1.33
ECHDC1-219ENST00000526299 RASA1P20936 1047 aa6.75□□□□□ -1.33
ECHDC1-219ENST00000526299 INPP5BP32019 993 aa6.75□□□□□ -1.33
ECHDC1-219ENST00000526299 IDH3AP50213 366 aa6.75□□□□□ -1.33
ECHDC1-219ENST00000526299 SEC13P55735 322 aa6.75□□□□□ -1.33
ECHDC1-219ENST00000526299 HFE2Q6ZVN8 426 aa6.75□□□□□ -1.33
ECHDC1-219ENST00000526299 TRPM4Q8TD43 1214 aa6.75□□□□□ -1.33
ECHDC1-219ENST00000526299 PCMTD2Q9NV79 361 aa6.75□□□□□ -1.33
ECHDC1-219ENST00000526299 KLK14Q9P0G3 267 aa6.75□□□□□ -1.33
ECHDC1-219ENST00000526299 SASH3O75995 380 aa6.74□□□□□ -1.33
ECHDC1-219ENST00000526299 GPLD1P80108 840 aa6.74□□□□□ -1.33
ECHDC1-219ENST00000526299 TTC9Q92623 222 aa6.74□□□□□ -1.33
ECHDC1-219ENST00000526299 HINFPQ9BQA5 517 aa6.74□□□□□ -1.33
ECHDC1-219ENST00000526299 SMG9Q9H0W8 520 aaKnown RBP6.74□□□□□ -1.33
ECHDC1-219ENST00000526299 DLL1O00548 723 aa6.73□□□□□ -1.33
ECHDC1-219ENST00000526299 RARAP10276 462 aa6.73□□□□□ -1.33
ECHDC1-219ENST00000526299 FSTP19883 344 aa6.73□□□□□ -1.33
ECHDC1-219ENST00000526299 SSTR4P31391 388 aa6.73□□□□□ -1.33
ECHDC1-219ENST00000526299 DZIP1LQ8IYY4 767 aaKnown RBP6.73□□□□□ -1.33
ECHDC1-219ENST00000526299 DGKZQ13574 1117 aa6.72□□□□□ -1.33
ECHDC1-219ENST00000526299 AKTIPQ9H8T0 292 aa6.72□□□□□ -1.33
ECHDC1-219ENST00000526299 ARSDP51689 593 aa6.71□□□□□ -1.34
ECHDC1-219ENST00000526299 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
ECHDC1-219ENST00000526299 F8W735 103 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-219ENST00000526299 UBTFP17480 764 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-219ENST00000526299 EIF2AK2P19525 551 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-219ENST00000526299 IGFBP4P22692 258 aa6.7□□□□□ -1.34
ECHDC1-219ENST00000526299 TFIP11Q9UBB9 837 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-219ENST00000526299 USP20Q9Y2K6 914 aa6.7□□□□□ -1.34
ECHDC1-219ENST00000526299 COL17A1Q9UMD9 1497 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-219ENST00000526299 J3QW42 95 aa6.69□□□□□ -1.34
ECHDC1-219ENST00000526299 MICAL2O94851 1124 aa6.69□□□□□ -1.34
ECHDC1-219ENST00000526299 NRLP54845 237 aa6.69□□□□□ -1.34
ECHDC1-219ENST00000526299 DPYDQ12882 1025 aa6.69□□□□□ -1.34
ECHDC1-219ENST00000526299 CRTC2Q53ET0 693 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-219ENST00000526299 MRPL18Q9H0U6 180 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-219ENST00000526299 QTRT2Q9H974 415 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-219ENST00000526299 MAFBQ9Y5Q3 323 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-219ENST00000526299 CD97P48960 835 aa6.68□□□□□ -1.34
ECHDC1-219ENST00000526299 GDF6Q6KF10 455 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-219ENST00000526299 LARP1Q6PKG0 1096 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-219ENST00000526299 AGGF1Q8N302 714 aaeCLIP6.68□□□□□ -1.34
ECHDC1-219ENST00000526299 TMEM130Q8N3G9 435 aa6.68□□□□□ -1.34
ECHDC1-219ENST00000526299 PLD4Q96BZ4 506 aa6.68□□□□□ -1.34
ECHDC1-219ENST00000526299 C11orf16Q9NQ32 467 aa6.68□□□□□ -1.34
ECHDC1-219ENST00000526299 TLR7Q9NYK1 1049 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-219ENST00000526299 OPLAHO14841 1288 aa6.67□□□□□ -1.34
ECHDC1-219ENST00000526299 PAX4O43316 350 aa6.67□□□□□ -1.34
ECHDC1-219ENST00000526299 MED26O95402 600 aa6.67□□□□□ -1.34
ECHDC1-219ENST00000526299 PTK7Q13308 1070 aa6.67□□□□□ -1.34
ECHDC1-219ENST00000526299 SLC51AQ86UW1 340 aa6.67□□□□□ -1.34
ECHDC1-219ENST00000526299 IL22RA1Q8N6P7 574 aa6.67□□□□□ -1.34
ECHDC1-219ENST00000526299 RTCBQ9Y3I0 505 aaKnown RBP6.67□□□□□ -1.34
ECHDC1-219ENST00000526299 LOC102724428A0A0B4J2F2 783 aa6.66□□□□□ -1.34
ECHDC1-219ENST00000526299 IRAK1P51617 712 aa6.66□□□□□ -1.34
ECHDC1-219ENST00000526299 SIK1P57059 783 aa6.66□□□□□ -1.34
ECHDC1-219ENST00000526299 SETDB1Q15047 1291 aa6.66□□□□□ -1.34
ECHDC1-219ENST00000526299 C11orf91Q3C1V1 193 aa6.66□□□□□ -1.34
ECHDC1-219ENST00000526299 NSUN5Q96P11 429 aaKnown RBP6.66□□□□□ -1.34
ECHDC1-219ENST00000526299 XYLBO75191 536 aa6.65□□□□□ -1.34
ECHDC1-219ENST00000526299 TGFB1P01137 390 aa6.65□□□□□ -1.34
ECHDC1-219ENST00000526299 GLB1P16278 677 aa6.65□□□□□ -1.34
ECHDC1-219ENST00000526299 ARID4AP29374 1257 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-219ENST00000526299 Q6ZS46 218 aa6.65□□□□□ -1.34
ECHDC1-219ENST00000526299 ANKMY2Q8IV38 441 aa6.65□□□□□ -1.34
ECHDC1-219ENST00000526299 CMTR1Q8N1G2 835 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-219ENST00000526299 GLMNQ92990 594 aa6.65□□□□□ -1.34
ECHDC1-219ENST00000526299 RAXQ9Y2V3 346 aa6.65□□□□□ -1.34
ECHDC1-219ENST00000526299 USP17L15C9J2P7 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 USP17L10C9JJH3 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 USP17L13C9JLJ4 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 USP17L12C9JPN9 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 USP17L11C9JVI0 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 USP17L21D6R901 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 USP17L18D6R9N7 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 USP17L22D6RA61 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 USP17L17D6RBQ6 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 USP17L19D6RCP7 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 USP17L20D6RJB6 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 MMP20O60882 483 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 PTCD1O75127 700 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 EGFRP00533 1210 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 GHRHP01286 108 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 IGLV1-40P01703 118 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 PSAPP07602 524 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 USP17L24Q0WX57 530 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 KANK4Q5T7N3 995 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 RGL4Q8IZJ4 473 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 MYO19Q96H55 970 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 UBL7Q96S82 380 aaPredicted RBP6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 LRFN2Q9ULH4 789 aa6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 OAS3Q9Y6K5 1087 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-219ENST00000526299 TAL1P17542 331 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-219ENST00000526299 TXKP42681 527 aa6.63□□□□□ -1.35
ECHDC1-219ENST00000526299 FLIIQ13045 1269 aa6.63□□□□□ -1.35
ECHDC1-219ENST00000526299 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-219ENST00000526299 TREML1Q86YW5 311 aa6.63□□□□□ -1.35
ECHDC1-219ENST00000526299 VTI1AQ96AJ9 217 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms