RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 CC2D2BQ6DHV5 1058 aa28.53■■■□□ 2.16
CKLF-206ENST00000526149 ATP6V0A2Q9Y487 856 aa28.53■■■□□ 2.16
CKLF-206ENST00000526149 CELF1Q92879 486 aaKnown RBP28.52■■■□□ 2.16
CKLF-206ENST00000526149 TAF1P21675 1872 aa28.51■■■□□ 2.15
CKLF-206ENST00000526149 CT47B1P0C2W7 299 aaPredicted RBP28.51■■■□□ 2.15
CKLF-206ENST00000526149 CCDC88AQ3V6T2 1871 aa28.51■■■□□ 2.15
CKLF-206ENST00000526149 HSP90B1P14625 803 aaKnown RBP28.5■■■□□ 2.15
CKLF-206ENST00000526149 UBE3BQ7Z3V4 1068 aa28.5■■■□□ 2.15
CKLF-206ENST00000526149 PSMD1Q99460 953 aa28.5■■■□□ 2.15
CKLF-206ENST00000526149 GPBP1L1Q9HC44 474 aaPredicted RBP28.5■■■□□ 2.15
CKLF-206ENST00000526149 ZNF277Q9NRM2 450 aaPredicted RBP28.5■■■□□ 2.15
CKLF-206ENST00000526149 SP8Q8IXZ3 490 aa28.49■■■□□ 2.15
CKLF-206ENST00000526149 SEC31BQ9NQW1 1179 aa28.49■■■□□ 2.15
CKLF-206ENST00000526149 ZC3H4Q9UPT8 1303 aaKnown RBP28.48■■■□□ 2.15
CKLF-206ENST00000526149 CCDC85AQ96PX6 553 aaPredicted RBP28.47■■■□□ 2.15
CKLF-206ENST00000526149 SMC4Q9NTJ3 1288 aa28.47■■■□□ 2.15
CKLF-206ENST00000526149 PTPRCP08575 1304 aa28.46■■■□□ 2.15
CKLF-206ENST00000526149 CTSWP56202 376 aa28.46■■■□□ 2.15
CKLF-206ENST00000526149 CCDC152Q4G0S7 254 aa28.46■■■□□ 2.15
CKLF-206ENST00000526149 GRIPAP1Q4V328 841 aa28.46■■■□□ 2.15
CKLF-206ENST00000526149 SLC4A10Q6U841 1118 aa28.46■■■□□ 2.15
CKLF-206ENST00000526149 TTLL11Q8NHH1 800 aa28.46■■■□□ 2.15
CKLF-206ENST00000526149 RARSP54136 660 aaKnown RBP28.45■■■□□ 2.14
CKLF-206ENST00000526149 PLA2G12BQ9BX93 195 aa28.45■■■□□ 2.14
CKLF-206ENST00000526149 TIAM2Q8IVF5 1701 aa28.45■■■□□ 2.14
CKLF-206ENST00000526149 DICER1Q9UPY3 1922 aaKnown RBP28.45■■■□□ 2.14
CKLF-206ENST00000526149 IARSP41252 1262 aaKnown RBP28.44■■■□□ 2.14
CKLF-206ENST00000526149 RPS8P62241 208 aaKnown RBP28.44■■■□□ 2.14
CKLF-206ENST00000526149 NMRK2Q9NPI5 230 aa28.44■■■□□ 2.14
CKLF-206ENST00000526149 ZBED9Q6R2W3 1325 aa28.43■■■□□ 2.14
CKLF-206ENST00000526149 KIF3CO14782 793 aa28.43■■■□□ 2.14
CKLF-206ENST00000526149 ALDH1L1O75891 902 aa28.43■■■□□ 2.14
CKLF-206ENST00000526149 TMC4Q7Z404 712 aa28.43■■■□□ 2.14
CKLF-206ENST00000526149 SRCIN1Q9C0H9 1055 aa28.43■■■□□ 2.14
CKLF-206ENST00000526149 GLTPD2A6NH11 291 aa28.42■■■□□ 2.14
CKLF-206ENST00000526149 BRPF1P55201 1214 aaPredicted RBP28.42■■■□□ 2.14
CKLF-206ENST00000526149 RTFDC1Q9BY42 306 aaPredicted RBP28.42■■■□□ 2.14
CKLF-206ENST00000526149 COL4A5P29400 1685 aa28.42■■■□□ 2.14
CKLF-206ENST00000526149 MPNDQ8N594 471 aa28.41■■■□□ 2.14
CKLF-206ENST00000526149 TMX4Q9H1E5 349 aaPredicted RBP28.41■■■□□ 2.14
CKLF-206ENST00000526149 GREM2Q9H772 168 aa28.41■■■□□ 2.14
CKLF-206ENST00000526149 GRM8O00222 908 aa28.4■■■□□ 2.14
CKLF-206ENST00000526149 CSF1RP07333 972 aa28.4■■■□□ 2.14
CKLF-206ENST00000526149 DPP8Q6V1X1 898 aaPredicted RBP28.4■■■□□ 2.14
CKLF-206ENST00000526149 NOB1Q9ULX3 412 aaKnown RBP28.4■■■□□ 2.14
CKLF-206ENST00000526149 LRRC37AA6NMS7 1700 aa28.4■■■□□ 2.14
CKLF-206ENST00000526149 RTL9Q8NET4 1388 aa28.39■■■□□ 2.14
CKLF-206ENST00000526149 FOXO4P98177 505 aa28.39■■■□□ 2.14
CKLF-206ENST00000526149 KDM2BQ8NHM5 1336 aa28.39■■■□□ 2.13
CKLF-206ENST00000526149 DUOX1Q9NRD9 1551 aa28.37■■■□□ 2.13
CKLF-206ENST00000526149 GPSM2P81274 684 aa28.37■■■□□ 2.13
CKLF-206ENST00000526149 EPHA10Q5JZY3 1008 aa28.37■■■□□ 2.13
CKLF-206ENST00000526149 RRAGCQ9HB90 399 aa28.37■■■□□ 2.13
CKLF-206ENST00000526149 FZD9O00144 591 aa28.36■■■□□ 2.13
CKLF-206ENST00000526149 C9orf78Q9NZ63 289 aaPredicted RBP28.36■■■□□ 2.13
CKLF-206ENST00000526149 MYH3P11055 1940 aa28.35■■■□□ 2.13
CKLF-206ENST00000526149 AOC3Q16853 763 aa28.35■■■□□ 2.13
CKLF-206ENST00000526149 ANKRD18AQ8IVF6 992 aa28.35■■■□□ 2.13
CKLF-206ENST00000526149 SUPT20HQ8NEM7 779 aa28.35■■■□□ 2.13
CKLF-206ENST00000526149 NSFL1CQ9UNZ2 370 aaKnown RBP28.35■■■□□ 2.13
CKLF-206ENST00000526149 UTYO14607 1347 aa28.35■■■□□ 2.13
CKLF-206ENST00000526149 ZNF541Q9H0D2 1346 aa28.35■■■□□ 2.13
CKLF-206ENST00000526149 POTECB2RU33 542 aa28.34■■■□□ 2.13
CKLF-206ENST00000526149 DDNO94850 711 aaPredicted RBP28.34■■■□□ 2.13
CKLF-206ENST00000526149 NBPF7P0C2Y1 421 aaPredicted RBP28.34■■■□□ 2.13
CKLF-206ENST00000526149 FAM161AQ3B820 660 aa28.34■■■□□ 2.13
CKLF-206ENST00000526149 DPY19L2Q6NUT2 758 aa28.34■■■□□ 2.13
CKLF-206ENST00000526149 LARGE2Q8N3Y3 721 aa28.34■■■□□ 2.13
CKLF-206ENST00000526149 KAZALD1Q96I82 304 aa28.34■■■□□ 2.13
CKLF-206ENST00000526149 VPS33BQ9H267 617 aa28.34■■■□□ 2.13
CKLF-206ENST00000526149 PPIP5K2O43314 1243 aa28.33■■■□□ 2.13
CKLF-206ENST00000526149 BCAR3O75815 825 aa28.33■■■□□ 2.13
CKLF-206ENST00000526149 CDC5LQ99459 802 aaKnown RBP28.33■■■□□ 2.13
CKLF-206ENST00000526149 POLLQ9UGP5 575 aa28.33■■■□□ 2.13
CKLF-206ENST00000526149 ITGA6P23229 1130 aa28.32■■■□□ 2.12
CKLF-206ENST00000526149 C1QTNF8P60827 252 aa28.32■■■□□ 2.12
CKLF-206ENST00000526149 KIAA2012Q0VF49 1180 aa28.32■■■□□ 2.12
CKLF-206ENST00000526149 JDP2Q8WYK2 163 aa28.32■■■□□ 2.12
CKLF-206ENST00000526149 SUCLG2Q96I99 432 aa28.32■■■□□ 2.12
CKLF-206ENST00000526149 PODXL2Q9NZ53 605 aa28.32■■■□□ 2.12
CKLF-206ENST00000526149 LTBP1Q14766 1721 aa28.32■■■□□ 2.12
CKLF-206ENST00000526149 LMBR1LQ6UX01 489 aa28.3■■■□□ 2.12
CKLF-206ENST00000526149 TBC1D16Q8TBP0 767 aa28.3■■■□□ 2.12
CKLF-206ENST00000526149 API5Q9BZZ5 524 aaKnown RBP28.3■■■□□ 2.12
CKLF-206ENST00000526149 USP44Q9H0E7 712 aa28.3■■■□□ 2.12
CKLF-206ENST00000526149 BSDC1Q9NW68 430 aaPredicted RBP28.3■■■□□ 2.12
CKLF-206ENST00000526149 ARHGAP45Q92619 1136 aa28.29■■■□□ 2.12
CKLF-206ENST00000526149 MINPP1Q9UNW1 487 aa28.29■■■□□ 2.12
CKLF-206ENST00000526149 WDR90Q96KV7 1748 aa28.29■■■□□ 2.12
CKLF-206ENST00000526149 KIF16BQ96L93 1317 aa28.28■■■□□ 2.12
CKLF-206ENST00000526149 NIM1KQ8IY84 436 aa28.28■■■□□ 2.12
CKLF-206ENST00000526149 GPR101Q96P66 508 aaPredicted RBP28.28■■■□□ 2.12
CKLF-206ENST00000526149 C6orf229H3BNL8 230 aa28.27■■■□□ 2.12
CKLF-206ENST00000526149 VEGFAP15692 232 aaPredicted RBP28.27■■■□□ 2.12
CKLF-206ENST00000526149 WTIPA6NIX2 430 aaPredicted RBP28.26■■■□□ 2.11
CKLF-206ENST00000526149 L3MBTL3Q96JM7 780 aaPredicted RBP28.26■■■□□ 2.11
CKLF-206ENST00000526149 TNNQ9UQP3 1299 aa28.26■■■□□ 2.11
CKLF-206ENST00000526149 ANKRD18BA2A2Z9 1011 aa28.25■■■□□ 2.11
CKLF-206ENST00000526149 IGHMBP2P38935 993 aaKnown RBP28.25■■■□□ 2.11
CKLF-206ENST00000526149 CCT4P50991 539 aaKnown RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms