RNA–Protein interactions for RNA: ENST00000525947.1

ROM1-203, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene ROM1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-203ENST00000525947 CLEC11AQ9Y240 323 aa31.64■■■□□ 2.66
ROM1-203ENST00000525947 EPHX2P34913 555 aa31.63■■■□□ 2.65
ROM1-203ENST00000525947 LDHDQ86WU2 507 aa31.63■■■□□ 2.65
ROM1-203ENST00000525947 NIM1KQ8IY84 436 aa31.63■■■□□ 2.65
ROM1-203ENST00000525947 CCDC30Q5VVM6 783 aa31.62■■■□□ 2.65
ROM1-203ENST00000525947 DPP8Q6V1X1 898 aaPredicted RBP31.62■■■□□ 2.65
ROM1-203ENST00000525947 WWC1Q8IX03 1113 aa31.62■■■□□ 2.65
ROM1-203ENST00000525947 MPNDQ8N594 471 aa31.62■■■□□ 2.65
ROM1-203ENST00000525947 SALL2Q9Y467 1007 aaPredicted RBP31.62■■■□□ 2.65
ROM1-203ENST00000525947 IRS4O14654 1257 aaPredicted RBP31.6■■■□□ 2.65
ROM1-203ENST00000525947 TRPM7Q96QT4 1865 aa31.59■■■□□ 2.65
ROM1-203ENST00000525947 TRIM28Q13263 835 aaKnown RBP31.59■■■□□ 2.65
ROM1-203ENST00000525947 CCDC27Q2M243 656 aa31.59■■■□□ 2.65
ROM1-203ENST00000525947 SUPT20HQ8NEM7 779 aa31.59■■■□□ 2.65
ROM1-203ENST00000525947 JARID2Q92833 1246 aaPredicted RBP31.58■■■□□ 2.65
ROM1-203ENST00000525947 CELF1Q92879 486 aaKnown RBP31.58■■■□□ 2.65
ROM1-203ENST00000525947 DUOX1Q9NRD9 1551 aa31.58■■■□□ 2.65
ROM1-203ENST00000525947 SF3B3Q15393 1217 aaKnown RBP31.57■■■□□ 2.64
ROM1-203ENST00000525947 RTFDC1Q9BY42 306 aaPredicted RBP31.57■■■□□ 2.64
ROM1-203ENST00000525947 JMYQ8N9B5 988 aa31.56■■■□□ 2.64
ROM1-203ENST00000525947 DDX58O95786 925 aaKnown RBP31.55■■■□□ 2.64
ROM1-203ENST00000525947 LMOD1P29536 600 aaPredicted RBP31.55■■■□□ 2.64
ROM1-203ENST00000525947 ZBTB38Q8NAP3 1195 aaPredicted RBP31.55■■■□□ 2.64
ROM1-203ENST00000525947 POLR2AP24928 1970 aaKnown RBP31.55■■■□□ 2.64
ROM1-203ENST00000525947 TWISTNBQ3B726 338 aaPredicted RBP31.54■■■□□ 2.64
ROM1-203ENST00000525947 PNMA8AQ86V59 439 aaPredicted RBP31.54■■■□□ 2.64
ROM1-203ENST00000525947 VPS33BQ9H267 617 aa31.54■■■□□ 2.64
ROM1-203ENST00000525947 MAP3K2Q9Y2U5 619 aa31.54■■■□□ 2.64
ROM1-203ENST00000525947 EPS15P42566 896 aa31.53■■■□□ 2.64
ROM1-203ENST00000525947 SCNN1DP51172 638 aa31.53■■■□□ 2.64
ROM1-203ENST00000525947 MAP1SQ66K74 1059 aaPredicted RBP31.53■■■□□ 2.64
ROM1-203ENST00000525947 METTL22Q9BUU2 404 aaPredicted RBP31.53■■■□□ 2.64
ROM1-203ENST00000525947 STK31Q9BXU1 1019 aa31.53■■■□□ 2.64
ROM1-203ENST00000525947 CHMP4AQ9BY43 222 aa31.53■■■□□ 2.64
ROM1-203ENST00000525947 ZNRF3Q9ULT6 936 aa31.53■■■□□ 2.64
ROM1-203ENST00000525947 CXCL9Q07325 125 aa31.52■■■□□ 2.64
ROM1-203ENST00000525947 TMC4Q7Z404 712 aa31.52■■■□□ 2.64
ROM1-203ENST00000525947 CCDC191Q8NCU4 936 aa31.52■■■□□ 2.64
ROM1-203ENST00000525947 CWC25Q9NXE8 425 aaPredicted RBP31.52■■■□□ 2.64
ROM1-203ENST00000525947 PASKQ96RG2 1323 aa31.51■■■□□ 2.64
ROM1-203ENST00000525947 ITGBL1O95965 494 aaPredicted RBP31.51■■■□□ 2.63
ROM1-203ENST00000525947 CREBZFQ9NS37 354 aa31.51■■■□□ 2.63
ROM1-203ENST00000525947 KIAA2012Q0VF49 1180 aa31.5■■■□□ 2.63
ROM1-203ENST00000525947 G2E3Q7L622 706 aa31.5■■■□□ 2.63
ROM1-203ENST00000525947 CCDC85AQ96PX6 553 aaPredicted RBP31.5■■■□□ 2.63
ROM1-203ENST00000525947 MKRN1Q9UHC7 482 aaKnown RBP31.5■■■□□ 2.63
ROM1-203ENST00000525947 NSFL1CQ9UNZ2 370 aaKnown RBP31.5■■■□□ 2.63
ROM1-203ENST00000525947 IL16Q14005 1332 aa31.49■■■□□ 2.63
ROM1-203ENST00000525947 PI4KAP2A4QPH2 592 aa31.49■■■□□ 2.63
ROM1-203ENST00000525947 PI4KAP1Q8N8J0 262 aa31.49■■■□□ 2.63
ROM1-203ENST00000525947 SEC31BQ9NQW1 1179 aa31.49■■■□□ 2.63
ROM1-203ENST00000525947 SCN9AQ15858 1988 aa31.48■■■□□ 2.63
ROM1-203ENST00000525947 RAD17O75943 681 aa31.48■■■□□ 2.63
ROM1-203ENST00000525947 PCCAP05165 728 aaPredicted RBP31.48■■■□□ 2.63
ROM1-203ENST00000525947 KSR2Q6VAB6 950 aa31.48■■■□□ 2.63
ROM1-203ENST00000525947 FAM9BQ8IZU0 186 aa31.48■■■□□ 2.63
ROM1-203ENST00000525947 CNTROBQ8N137 903 aa31.48■■■□□ 2.63
ROM1-203ENST00000525947 RPS8P62241 208 aaKnown RBP31.47■■■□□ 2.63
ROM1-203ENST00000525947 GPSM2P81274 684 aa31.47■■■□□ 2.63
ROM1-203ENST00000525947 FANCIQ9NVI1 1328 aa31.47■■■□□ 2.63
ROM1-203ENST00000525947 C6orf229H3BNL8 230 aa31.46■■■□□ 2.63
ROM1-203ENST00000525947 RIMBP2O15034 1052 aa31.46■■■□□ 2.63
ROM1-203ENST00000525947 SLC4A2P04920 1241 aa31.46■■■□□ 2.63
ROM1-203ENST00000525947 CIAPIN1Q6FI81 312 aa31.46■■■□□ 2.63
ROM1-203ENST00000525947 PCNTO95613 3336 aa31.45■■■□□ 2.63
ROM1-203ENST00000525947 PDE8AO60658 829 aa31.45■■■□□ 2.63
ROM1-203ENST00000525947 YDJCA8MPS7 323 aa31.44■■■□□ 2.62
ROM1-203ENST00000525947 IGKV5-2P06315 115 aa31.44■■■□□ 2.62
ROM1-203ENST00000525947 HSP90B1P14625 803 aaKnown RBP31.44■■■□□ 2.62
ROM1-203ENST00000525947 GMPSP49915 693 aaPredicted RBP31.44■■■□□ 2.62
ROM1-203ENST00000525947 WASHC4Q2M389 1173 aa31.44■■■□□ 2.62
ROM1-203ENST00000525947 NCBP3Q53F19 620 aaKnown RBP31.44■■■□□ 2.62
ROM1-203ENST00000525947 GPR101Q96P66 508 aaPredicted RBP31.44■■■□□ 2.62
ROM1-203ENST00000525947 GPRC5DQ9NZD1 345 aa31.44■■■□□ 2.62
ROM1-203ENST00000525947 POLLQ9UGP5 575 aa31.44■■■□□ 2.62
ROM1-203ENST00000525947 PSME4Q14997 1843 aa31.44■■■□□ 2.62
ROM1-203ENST00000525947 TMEM88BA6NKF7 163 aa31.43■■■□□ 2.62
ROM1-203ENST00000525947 NEXNQ0ZGT2 675 aa31.42■■■□□ 2.62
ROM1-203ENST00000525947 CWF19L2Q2TBE0 894 aaKnown RBP31.42■■■□□ 2.62
ROM1-203ENST00000525947 CCDC152Q4G0S7 254 aa31.42■■■□□ 2.62
ROM1-203ENST00000525947 WDR63Q8IWG1 891 aa31.42■■■□□ 2.62
ROM1-203ENST00000525947 BCL2L13Q9BXK5 485 aa31.42■■■□□ 2.62
ROM1-203ENST00000525947 DBNDD1Q9H9R9 158 aa31.42■■■□□ 2.62
ROM1-203ENST00000525947 TNIP1Q15025 636 aa31.41■■■□□ 2.62
ROM1-203ENST00000525947 IFFO2Q5TF58 517 aa31.41■■■□□ 2.62
ROM1-203ENST00000525947 USP50Q70EL3 339 aaPredicted RBP31.41■■■□□ 2.62
ROM1-203ENST00000525947 EXOSC9Q06265 439 aaKnown RBP31.4■■■□□ 2.62
ROM1-203ENST00000525947 FMR1Q06787 632 aaKnown RBP eCLIP31.4■■■□□ 2.62
ROM1-203ENST00000525947 ADARB2Q9NS39 739 aaKnown RBP31.4■■■□□ 2.62
ROM1-203ENST00000525947 DOK7Q18PE1 504 aa31.39■■■□□ 2.62
ROM1-203ENST00000525947 CDHR2Q9BYE9 1310 aa31.39■■■□□ 2.62
ROM1-203ENST00000525947 HSPA1AP0DMV8 641 aaKnown RBP31.38■■■□□ 2.61
ROM1-203ENST00000525947 HSPA1BP0DMV9 641 aaKnown RBP31.38■■■□□ 2.61
ROM1-203ENST00000525947 TBC1D16Q8TBP0 767 aa31.38■■■□□ 2.61
ROM1-203ENST00000525947 SPINK5Q9NQ38 1064 aaPredicted RBP31.38■■■□□ 2.61
ROM1-203ENST00000525947 CNTNAP1P78357 1384 aa31.38■■■□□ 2.61
ROM1-203ENST00000525947 NEURL1BA8MQ27 555 aa31.37■■■□□ 2.61
ROM1-203ENST00000525947 VAMP4O75379 141 aa31.37■■■□□ 2.61
ROM1-203ENST00000525947 FLIIQ13045 1269 aa31.37■■■□□ 2.61
ROM1-203ENST00000525947 EYA3Q99504 573 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms