RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 CLEC11AQ9Y240 323 aa15.34■□□□□ 0.05
CLNS1A-202ENST00000525064 MYH3P11055 1940 aa15.34■□□□□ 0.05
CLNS1A-202ENST00000525064 EPS15P42566 896 aa15.33■□□□□ 0.04
CLNS1A-202ENST00000525064 MAP1SQ66K74 1059 aaPredicted RBP15.33■□□□□ 0.04
CLNS1A-202ENST00000525064 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
CLNS1A-202ENST00000525064 SP8Q8IXZ3 490 aa15.33■□□□□ 0.04
CLNS1A-202ENST00000525064 TSPYL6Q8N831 410 aa15.33■□□□□ 0.04
CLNS1A-202ENST00000525064 BBOX1O75936 387 aa15.32■□□□□ 0.04
CLNS1A-202ENST00000525064 HSPA1AP0DMV8 641 aaKnown RBP15.32■□□□□ 0.04
CLNS1A-202ENST00000525064 HSPA1BP0DMV9 641 aaKnown RBP15.32■□□□□ 0.04
CLNS1A-202ENST00000525064 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
CLNS1A-202ENST00000525064 MPNDQ8N594 471 aa15.32■□□□□ 0.04
CLNS1A-202ENST00000525064 CELF1Q92879 486 aaKnown RBP15.32■□□□□ 0.04
CLNS1A-202ENST00000525064 SCN9AQ15858 1988 aa15.31■□□□□ 0.04
CLNS1A-202ENST00000525064 FMR1Q06787 632 aaKnown RBP eCLIP15.31■□□□□ 0.04
CLNS1A-202ENST00000525064 COL13A1Q5TAT6 717 aaPredicted RBP15.31■□□□□ 0.04
CLNS1A-202ENST00000525064 TSR2Q969E8 191 aaKnown RBP15.31■□□□□ 0.04
CLNS1A-202ENST00000525064 MYD88Q99836 296 aa15.31■□□□□ 0.04
CLNS1A-202ENST00000525064 CNTNAP1P78357 1384 aa15.31■□□□□ 0.04
CLNS1A-202ENST00000525064 IRS4O14654 1257 aaPredicted RBP15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 LMOD1P29536 600 aaPredicted RBP15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 CALD1Q05682 793 aaKnown RBP15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 CXCL9Q07325 125 aa15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 GOLGA2Q08379 1002 aa15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 KIAA2012Q0VF49 1180 aa15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 SF3B3Q15393 1217 aaKnown RBP15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 RIC3Q7Z5B4 369 aa15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 PNMA8AQ86V59 439 aaPredicted RBP15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 CNTROBQ8N137 903 aa15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 SUPT20HQ8NEM7 779 aa15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 TMX4Q9H1E5 349 aaPredicted RBP15.3■□□□□ 0.04
CLNS1A-202ENST00000525064 YDJCA8MPS7 323 aa15.29■□□□□ 0.04
CLNS1A-202ENST00000525064 TRIM28Q13263 835 aaKnown RBP15.29■□□□□ 0.04
CLNS1A-202ENST00000525064 JARID2Q92833 1246 aaPredicted RBP15.29■□□□□ 0.04
CLNS1A-202ENST00000525064 VPS33BQ9H267 617 aa15.29■□□□□ 0.04
CLNS1A-202ENST00000525064 ZNRF3Q9ULT6 936 aa15.29■□□□□ 0.04
CLNS1A-202ENST00000525064 CACNA1FO60840 1977 aa15.29■□□□□ 0.04
CLNS1A-202ENST00000525064 POLR2AP24928 1970 aaKnown RBP15.29■□□□□ 0.04
CLNS1A-202ENST00000525064 TMEM88BA6NKF7 163 aa15.28■□□□□ 0.04
CLNS1A-202ENST00000525064 RAD17O75943 681 aa15.28■□□□□ 0.04
CLNS1A-202ENST00000525064 PSME4Q14997 1843 aa15.28■□□□□ 0.04
CLNS1A-202ENST00000525064 SHTN1A0MZ66 631 aa15.27■□□□□ 0.04
CLNS1A-202ENST00000525064 GMPSP49915 693 aaPredicted RBP15.27■□□□□ 0.04
CLNS1A-202ENST00000525064 GPSM2P81274 684 aa15.27■□□□□ 0.04
CLNS1A-202ENST00000525064 ZBTB38Q8NAP3 1195 aaPredicted RBP15.27■□□□□ 0.04
CLNS1A-202ENST00000525064 GPR101Q96P66 508 aaPredicted RBP15.27■□□□□ 0.04
CLNS1A-202ENST00000525064 SEC31BQ9NQW1 1179 aa15.27■□□□□ 0.04
CLNS1A-202ENST00000525064 GPRC5DQ9NZD1 345 aa15.27■□□□□ 0.04
CLNS1A-202ENST00000525064 VEGFBP49765 207 aa15.26■□□□□ 0.03
CLNS1A-202ENST00000525064 CCDC30Q5VVM6 783 aa15.26■□□□□ 0.03
CLNS1A-202ENST00000525064 CIAPIN1Q6FI81 312 aa15.26■□□□□ 0.03
CLNS1A-202ENST00000525064 TMC4Q7Z404 712 aa15.26■□□□□ 0.03
CLNS1A-202ENST00000525064 WWC1Q8IX03 1113 aa15.26■□□□□ 0.03
CLNS1A-202ENST00000525064 METTL22Q9BUU2 404 aaPredicted RBP15.26■□□□□ 0.03
CLNS1A-202ENST00000525064 POLLQ9UGP5 575 aa15.26■□□□□ 0.03
CLNS1A-202ENST00000525064 THSD7BQ9C0I4 1608 aa15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 TRAF5O00463 557 aa15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 PCCAP05165 728 aaPredicted RBP15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 CCDC27Q2M243 656 aa15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 USP50Q70EL3 339 aaPredicted RBP15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 G2E3Q7L622 706 aa15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 CCDC85AQ96PX6 553 aaPredicted RBP15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 DBNDD1Q9H9R9 158 aa15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 MRS2Q9HD23 443 aa15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 ADARB2Q9NS39 739 aaKnown RBP15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 NSFL1CQ9UNZ2 370 aaKnown RBP15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 MAP3K2Q9Y2U5 619 aa15.25■□□□□ 0.03
CLNS1A-202ENST00000525064 ZNF646O15015 1829 aaPredicted RBP15.24■□□□□ 0.03
CLNS1A-202ENST00000525064 RIMBP2O15034 1052 aa15.24■□□□□ 0.03
CLNS1A-202ENST00000525064 IGKV5-2P06315 115 aa15.24■□□□□ 0.03
CLNS1A-202ENST00000525064 CCDC191Q8NCU4 936 aa15.24■□□□□ 0.03
CLNS1A-202ENST00000525064 TRPM4Q8TD43 1214 aa15.24■□□□□ 0.03
CLNS1A-202ENST00000525064 CWC25Q9NXE8 425 aaPredicted RBP15.24■□□□□ 0.03
CLNS1A-202ENST00000525064 PI4KAP2A4QPH2 592 aa15.23■□□□□ 0.03
CLNS1A-202ENST00000525064 HIRAP54198 1017 aaPredicted RBP15.23■□□□□ 0.03
CLNS1A-202ENST00000525064 RPS8P62241 208 aaKnown RBP15.23■□□□□ 0.03
CLNS1A-202ENST00000525064 WASHC4Q2M389 1173 aa15.23■□□□□ 0.03
CLNS1A-202ENST00000525064 TWISTNBQ3B726 338 aaPredicted RBP15.23■□□□□ 0.03
CLNS1A-202ENST00000525064 PI4KAP1Q8N8J0 262 aa15.23■□□□□ 0.03
CLNS1A-202ENST00000525064 KCNQ5Q9NR82 932 aa15.23■□□□□ 0.03
CLNS1A-202ENST00000525064 ZBTB12Q9Y330 459 aaPredicted RBP15.23■□□□□ 0.03
CLNS1A-202ENST00000525064 RTL9Q8NET4 1388 aa15.23■□□□□ 0.03
CLNS1A-202ENST00000525064 ZNF316A6NFI3 1004 aaPredicted RBP15.22■□□□□ 0.03
CLNS1A-202ENST00000525064 RASSF10A6NK89 507 aa15.22■□□□□ 0.03
CLNS1A-202ENST00000525064 C6orf229H3BNL8 230 aa15.22■□□□□ 0.03
CLNS1A-202ENST00000525064 PSMD14O00487 310 aa15.22■□□□□ 0.03
CLNS1A-202ENST00000525064 FOXN1O15353 648 aa15.22■□□□□ 0.03
CLNS1A-202ENST00000525064 PDE8AO60658 829 aa15.22■□□□□ 0.03
CLNS1A-202ENST00000525064 DOK7Q18PE1 504 aa15.22■□□□□ 0.03
CLNS1A-202ENST00000525064 TBC1D16Q8TBP0 767 aa15.22■□□□□ 0.03
CLNS1A-202ENST00000525064 BCL2L13Q9BXK5 485 aa15.22■□□□□ 0.03
CLNS1A-202ENST00000525064 SALL2Q9Y467 1007 aaPredicted RBP15.22■□□□□ 0.03
CLNS1A-202ENST00000525064 A0A1B0GUL6 1792 aa15.21■□□□□ 0.03
CLNS1A-202ENST00000525064 CDHR2Q9BYE9 1310 aa15.21■□□□□ 0.03
CLNS1A-202ENST00000525064 FANCIQ9NVI1 1328 aa15.21■□□□□ 0.03
CLNS1A-202ENST00000525064 ECE2O60344 883 aa15.21■□□□□ 0.03
CLNS1A-202ENST00000525064 DDX58O95786 925 aaKnown RBP15.21■□□□□ 0.03
CLNS1A-202ENST00000525064 ZEB1P37275 1124 aaPredicted RBP15.21■□□□□ 0.03
CLNS1A-202ENST00000525064 TNIP1Q15025 636 aa15.21■□□□□ 0.03
CLNS1A-202ENST00000525064 CWF19L2Q2TBE0 894 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms