RNA–Protein interactions for RNA: ENST00000524852.1

CAVIN3-202, Transcript of caveolae associated protein 3, humanhuman

TSL 3

Gene CAVIN3, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-202ENST00000524852 SMC4Q9NTJ3 1288 aa20.61■□□□□ 0.89
CAVIN3-202ENST00000524852 H7C1W4 665 aa20.6■□□□□ 0.89
CAVIN3-202ENST00000524852 UBE3BQ7Z3V4 1068 aa20.6■□□□□ 0.89
CAVIN3-202ENST00000524852 JDP2Q8WYK2 163 aa20.6■□□□□ 0.89
CAVIN3-202ENST00000524852 SSH1Q8WYL5 1049 aa20.6■□□□□ 0.89
CAVIN3-202ENST00000524852 F6X3S4 739 aa20.59■□□□□ 0.89
CAVIN3-202ENST00000524852 ALDH1L1O75891 902 aa20.59■□□□□ 0.89
CAVIN3-202ENST00000524852 RPS8P62241 208 aaKnown RBP20.59■□□□□ 0.89
CAVIN3-202ENST00000524852 OLFM4Q6UX06 510 aa20.59■□□□□ 0.89
CAVIN3-202ENST00000524852 DPP8Q6V1X1 898 aaPredicted RBP20.59■□□□□ 0.89
CAVIN3-202ENST00000524852 JARID2Q92833 1246 aaPredicted RBP20.59■□□□□ 0.89
CAVIN3-202ENST00000524852 SRCIN1Q9C0H9 1055 aa20.59■□□□□ 0.89
CAVIN3-202ENST00000524852 VPS33BQ9H267 617 aa20.59■□□□□ 0.89
CAVIN3-202ENST00000524852 ZNF277Q9NRM2 450 aaPredicted RBP20.59■□□□□ 0.89
CAVIN3-202ENST00000524852 IARSP41252 1262 aaKnown RBP20.58■□□□□ 0.89
CAVIN3-202ENST00000524852 BEND3Q5T5X7 828 aa20.58■□□□□ 0.89
CAVIN3-202ENST00000524852 MPNDQ8N594 471 aa20.58■□□□□ 0.89
CAVIN3-202ENST00000524852 C9orf78Q9NZ63 289 aaPredicted RBP20.58■□□□□ 0.89
CAVIN3-202ENST00000524852 GLTPD2A6NH11 291 aa20.57■□□□□ 0.88
CAVIN3-202ENST00000524852 CTSWP56202 376 aa20.57■□□□□ 0.88
CAVIN3-202ENST00000524852 CDC5LQ99459 802 aaKnown RBP20.57■□□□□ 0.88
CAVIN3-202ENST00000524852 CACNA1SQ13698 1873 aa20.56■□□□□ 0.88
CAVIN3-202ENST00000524852 C16orf71Q8IYS4 520 aaPredicted RBP20.56■□□□□ 0.88
CAVIN3-202ENST00000524852 BCL2L13Q9BXK5 485 aa20.56■□□□□ 0.88
CAVIN3-202ENST00000524852 PRELPP51888 382 aa20.55■□□□□ 0.88
CAVIN3-202ENST00000524852 ANKRD18AQ8IVF6 992 aa20.55■□□□□ 0.88
CAVIN3-202ENST00000524852 LARGE2Q8N3Y3 721 aa20.55■□□□□ 0.88
CAVIN3-202ENST00000524852 FER1L6Q2WGJ9 1857 aa20.55■□□□□ 0.88
CAVIN3-202ENST00000524852 SBF1O95248 1867 aa20.54■□□□□ 0.88
CAVIN3-202ENST00000524852 GRM8O00222 908 aa20.54■□□□□ 0.88
CAVIN3-202ENST00000524852 TTLL11Q8NHH1 800 aa20.54■□□□□ 0.88
CAVIN3-202ENST00000524852 CELF1Q92879 486 aaKnown RBP20.54■□□□□ 0.88
CAVIN3-202ENST00000524852 PLA2G12BQ9BX93 195 aa20.54■□□□□ 0.88
CAVIN3-202ENST00000524852 CCDC85AQ96PX6 553 aaPredicted RBP20.53■□□□□ 0.88
CAVIN3-202ENST00000524852 RTFDC1Q9BY42 306 aaPredicted RBP20.53■□□□□ 0.88
CAVIN3-202ENST00000524852 NSFL1CQ9UNZ2 370 aaKnown RBP20.53■□□□□ 0.88
CAVIN3-202ENST00000524852 ZBED9Q6R2W3 1325 aa20.53■□□□□ 0.88
CAVIN3-202ENST00000524852 IPO8O15397 1037 aaKnown RBP20.52■□□□□ 0.88
CAVIN3-202ENST00000524852 PPIP5K2O43314 1243 aa20.52■□□□□ 0.88
CAVIN3-202ENST00000524852 VEGFAP15692 232 aaPredicted RBP20.52■□□□□ 0.88
CAVIN3-202ENST00000524852 EIF6P56537 245 aaKnown RBP20.52■□□□□ 0.88
CAVIN3-202ENST00000524852 NIM1KQ8IY84 436 aa20.52■□□□□ 0.88
CAVIN3-202ENST00000524852 API5Q9BZZ5 524 aaKnown RBP20.52■□□□□ 0.88
CAVIN3-202ENST00000524852 SEC31BQ9NQW1 1179 aa20.52■□□□□ 0.88
CAVIN3-202ENST00000524852 DDX60Q8IY21 1712 aaKnown RBP20.51■□□□□ 0.87
CAVIN3-202ENST00000524852 IGHMBP2P38935 993 aaKnown RBP20.51■□□□□ 0.87
CAVIN3-202ENST00000524852 RARSP54136 660 aaKnown RBP20.51■□□□□ 0.87
CAVIN3-202ENST00000524852 BRPF1P55201 1214 aaPredicted RBP20.51■□□□□ 0.87
CAVIN3-202ENST00000524852 EYA3Q99504 573 aa20.51■□□□□ 0.87
CAVIN3-202ENST00000524852 RRAGCQ9HB90 399 aa20.51■□□□□ 0.87
CAVIN3-202ENST00000524852 NMRK2Q9NPI5 230 aa20.51■□□□□ 0.87
CAVIN3-202ENST00000524852 ANKIB1Q9P2G1 1089 aa20.51■□□□□ 0.87
CAVIN3-202ENST00000524852 KIF16BQ96L93 1317 aa20.51■□□□□ 0.87
CAVIN3-202ENST00000524852 LAMB2P55268 1798 aa20.5■□□□□ 0.87
CAVIN3-202ENST00000524852 C6orf229H3BNL8 230 aa20.5■□□□□ 0.87
CAVIN3-202ENST00000524852 C1QTNF8P60827 252 aa20.5■□□□□ 0.87
CAVIN3-202ENST00000524852 RTL9Q8NET4 1388 aa20.49■□□□□ 0.87
CAVIN3-202ENST00000524852 TOMM70O94826 608 aa20.49■□□□□ 0.87
CAVIN3-202ENST00000524852 CCT4P50991 539 aaKnown RBP20.49■□□□□ 0.87
CAVIN3-202ENST00000524852 CASP7P55210 303 aa20.49■□□□□ 0.87
CAVIN3-202ENST00000524852 MPHOSPH8Q99549 860 aa20.49■□□□□ 0.87
CAVIN3-202ENST00000524852 GREM2Q9H772 168 aa20.49■□□□□ 0.87
CAVIN3-202ENST00000524852 NOB1Q9ULX3 412 aaKnown RBP20.49■□□□□ 0.87
CAVIN3-202ENST00000524852 HDAC5Q9UQL6 1122 aa20.49■□□□□ 0.87
CAVIN3-202ENST00000524852 CHMP3Q9Y3E7 222 aa20.49■□□□□ 0.87
CAVIN3-202ENST00000524852 ANKRD18BA2A2Z9 1011 aa20.48■□□□□ 0.87
CAVIN3-202ENST00000524852 IQCA1LA6NCM1 817 aa20.48■□□□□ 0.87
CAVIN3-202ENST00000524852 FZD9O00144 591 aa20.48■□□□□ 0.87
CAVIN3-202ENST00000524852 KIF3CO14782 793 aa20.48■□□□□ 0.87
CAVIN3-202ENST00000524852 CSF1RP07333 972 aa20.48■□□□□ 0.87
CAVIN3-202ENST00000524852 IFIT5Q13325 482 aaKnown RBP20.48■□□□□ 0.87
CAVIN3-202ENST00000524852 WASHC4Q2M389 1173 aa20.48■□□□□ 0.87
CAVIN3-202ENST00000524852 ARHGAP45Q92619 1136 aa20.48■□□□□ 0.87
CAVIN3-202ENST00000524852 BSDC1Q9NW68 430 aaPredicted RBP20.48■□□□□ 0.87
CAVIN3-202ENST00000524852 G3V3G9 751 aa20.47■□□□□ 0.87
CAVIN3-202ENST00000524852 ITGA6P23229 1130 aa20.47■□□□□ 0.87
CAVIN3-202ENST00000524852 KIAA2012Q0VF49 1180 aa20.47■□□□□ 0.87
CAVIN3-202ENST00000524852 AOC3Q16853 763 aa20.47■□□□□ 0.87
CAVIN3-202ENST00000524852 CCDC57Q2TAC2 916 aa20.47■□□□□ 0.87
CAVIN3-202ENST00000524852 DCAF8Q5TAQ9 597 aa20.47■□□□□ 0.87
CAVIN3-202ENST00000524852 ZC3H12CQ9C0D7 883 aaKnown RBP20.47■□□□□ 0.87
CAVIN3-202ENST00000524852 CCDC88AQ3V6T2 1871 aa20.47■□□□□ 0.87
CAVIN3-202ENST00000524852 SNED1Q8TER0 1413 aa20.46■□□□□ 0.87
CAVIN3-202ENST00000524852 DDNO94850 711 aaPredicted RBP20.46■□□□□ 0.87
CAVIN3-202ENST00000524852 GPSM2P81274 684 aa20.46■□□□□ 0.87
CAVIN3-202ENST00000524852 TAF7LQ5H9L4 462 aa20.46■□□□□ 0.87
CAVIN3-202ENST00000524852 GPC2Q8N158 579 aa20.46■□□□□ 0.87
CAVIN3-202ENST00000524852 PODXL2Q9NZ53 605 aa20.46■□□□□ 0.87
CAVIN3-202ENST00000524852 GGA1Q9UJY5 639 aa20.46■□□□□ 0.87
CAVIN3-202ENST00000524852 ZNRF3Q9ULT6 936 aa20.46■□□□□ 0.87
CAVIN3-202ENST00000524852 FOXO4P98177 505 aa20.45■□□□□ 0.86
CAVIN3-202ENST00000524852 LMBR1LQ6UX01 489 aa20.45■□□□□ 0.86
CAVIN3-202ENST00000524852 XDHP47989 1333 aa20.45■□□□□ 0.86
CAVIN3-202ENST00000524852 DICER1Q9UPY3 1922 aaKnown RBP20.45■□□□□ 0.86
CAVIN3-202ENST00000524852 ATP2B4P23634 1241 aa20.44■□□□□ 0.86
CAVIN3-202ENST00000524852 FAM161AQ3B820 660 aa20.44■□□□□ 0.86
CAVIN3-202ENST00000524852 TBC1D16Q8TBP0 767 aa20.44■□□□□ 0.86
CAVIN3-202ENST00000524852 ANKRD2Q9GZV1 360 aa20.44■□□□□ 0.86
CAVIN3-202ENST00000524852 TIAM2Q8IVF5 1701 aa20.44■□□□□ 0.86
CAVIN3-202ENST00000524852 UFL1O94874 794 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms