RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 MBIPQ9NS73 344 aa21.15■□□□□ 0.98
HIF3A-208ENST00000524533 DUSP27Q5VZP5 1158 aa21.14■□□□□ 0.97
HIF3A-208ENST00000524533 HYPKQ9NX55 129 aa21.14■□□□□ 0.97
HIF3A-208ENST00000524533 ZNRF3Q9ULT6 936 aa21.14■□□□□ 0.97
HIF3A-208ENST00000524533 VEGFBP49765 207 aa21.13■□□□□ 0.97
HIF3A-208ENST00000524533 USP50Q70EL3 339 aaPredicted RBP21.13■□□□□ 0.97
HIF3A-208ENST00000524533 ISCA1Q9BUE6 129 aa21.13■□□□□ 0.97
HIF3A-208ENST00000524533 KIAA2012Q0VF49 1180 aa21.12■□□□□ 0.97
HIF3A-208ENST00000524533 TMC4Q7Z404 712 aa21.12■□□□□ 0.97
HIF3A-208ENST00000524533 TRPM7Q96QT4 1865 aa21.11■□□□□ 0.97
HIF3A-208ENST00000524533 RASSF10A6NK89 507 aa21.11■□□□□ 0.97
HIF3A-208ENST00000524533 ATP5J2-PTCD1G3V325 749 aa21.11■□□□□ 0.97
HIF3A-208ENST00000524533 CAPN15O75808 1086 aa21.11■□□□□ 0.97
HIF3A-208ENST00000524533 CXCL9Q07325 125 aa21.11■□□□□ 0.97
HIF3A-208ENST00000524533 FAM89AQ96GI7 184 aa21.11■□□□□ 0.97
HIF3A-208ENST00000524533 ADARB2Q9NS39 739 aaKnown RBP21.11■□□□□ 0.97
HIF3A-208ENST00000524533 GPRC5DQ9NZD1 345 aa21.11■□□□□ 0.97
HIF3A-208ENST00000524533 ABT1Q9ULW3 272 aaKnown RBP21.11■□□□□ 0.97
HIF3A-208ENST00000524533 APAF1O14727 1248 aa21.1■□□□□ 0.97
HIF3A-208ENST00000524533 ZNF853P0CG23 659 aa21.1■□□□□ 0.97
HIF3A-208ENST00000524533 CALD1Q05682 793 aaKnown RBP21.1■□□□□ 0.97
HIF3A-208ENST00000524533 AIDAQ96BJ3 306 aa21.1■□□□□ 0.97
HIF3A-208ENST00000524533 IFT57Q9NWB7 429 aa21.1■□□□□ 0.97
HIF3A-208ENST00000524533 CDHR2Q9BYE9 1310 aa21.09■□□□□ 0.97
HIF3A-208ENST00000524533 FOXN1O15353 648 aa21.09■□□□□ 0.97
HIF3A-208ENST00000524533 GMPSP49915 693 aaPredicted RBP21.09■□□□□ 0.97
HIF3A-208ENST00000524533 GNAI1P63096 354 aa21.09■□□□□ 0.97
HIF3A-208ENST00000524533 DEFB115Q30KQ5 88 aa21.09■□□□□ 0.97
HIF3A-208ENST00000524533 CIAPIN1Q6FI81 312 aa21.09■□□□□ 0.97
HIF3A-208ENST00000524533 COL4A1P02462 1669 aa21.09■□□□□ 0.97
HIF3A-208ENST00000524533 THSD7BQ9C0I4 1608 aa21.08■□□□□ 0.97
HIF3A-208ENST00000524533 GOLGA2Q08379 1002 aa21.08■□□□□ 0.97
HIF3A-208ENST00000524533 SF3B3Q15393 1217 aaKnown RBP21.08■□□□□ 0.97
HIF3A-208ENST00000524533 RTL5Q5HYW3 569 aaPredicted RBP21.08■□□□□ 0.97
HIF3A-208ENST00000524533 RAD17O75943 681 aa21.07■□□□□ 0.96
HIF3A-208ENST00000524533 FMR1Q06787 632 aaKnown RBP eCLIP21.07■□□□□ 0.96
HIF3A-208ENST00000524533 TNIP1Q15025 636 aa21.07■□□□□ 0.96
HIF3A-208ENST00000524533 RIC3Q7Z5B4 369 aa21.07■□□□□ 0.96
HIF3A-208ENST00000524533 CELF1Q92879 486 aaKnown RBP21.07■□□□□ 0.96
HIF3A-208ENST00000524533 BCL2L13Q9BXK5 485 aa21.07■□□□□ 0.96
HIF3A-208ENST00000524533 IRS4O14654 1257 aaPredicted RBP21.06■□□□□ 0.96
HIF3A-208ENST00000524533 TRIM28Q13263 835 aaKnown RBP21.06■□□□□ 0.96
HIF3A-208ENST00000524533 WDR33Q9C0J8 1336 aaKnown RBP21.05■□□□□ 0.96
HIF3A-208ENST00000524533 TRAF5O00463 557 aa21.05■□□□□ 0.96
HIF3A-208ENST00000524533 ELL2O00472 640 aaPredicted RBP21.05■□□□□ 0.96
HIF3A-208ENST00000524533 PHAXQ9H814 394 aaKnown RBP21.05■□□□□ 0.96
HIF3A-208ENST00000524533 NSFL1CQ9UNZ2 370 aaKnown RBP21.05■□□□□ 0.96
HIF3A-208ENST00000524533 YDJCA8MPS7 323 aa21.04■□□□□ 0.96
HIF3A-208ENST00000524533 CTCFP49711 727 aaPredicted RBP21.04■□□□□ 0.96
HIF3A-208ENST00000524533 WBP1LQ9NX94 342 aa21.04■□□□□ 0.96
HIF3A-208ENST00000524533 WASHC4Q2M389 1173 aa21.03■□□□□ 0.96
HIF3A-208ENST00000524533 PAXIP1Q6ZW49 1069 aaPredicted RBP21.03■□□□□ 0.96
HIF3A-208ENST00000524533 ZBTB38Q8NAP3 1195 aaPredicted RBP21.03■□□□□ 0.96
HIF3A-208ENST00000524533 MYD88Q99836 296 aa21.03■□□□□ 0.96
HIF3A-208ENST00000524533 PRDM10Q9NQV6 1147 aa21.03■□□□□ 0.96
HIF3A-208ENST00000524533 C6orf229H3BNL8 230 aa21.02■□□□□ 0.96
HIF3A-208ENST00000524533 HSP90B1P14625 803 aaKnown RBP21.02■□□□□ 0.96
HIF3A-208ENST00000524533 GPSM2P81274 684 aa21.01■□□□□ 0.95
HIF3A-208ENST00000524533 CST9Q5W186 159 aa21.01■□□□□ 0.95
HIF3A-208ENST00000524533 C8orf58Q8NAV2 365 aa21.01■□□□□ 0.95
HIF3A-208ENST00000524533 CAPNS2Q96L46 248 aa21.01■□□□□ 0.95
HIF3A-208ENST00000524533 DBNDD1Q9H9R9 158 aa21.01■□□□□ 0.95
HIF3A-208ENST00000524533 RIMBP2O15034 1052 aa21■□□□□ 0.95
HIF3A-208ENST00000524533 DDX58O95786 925 aaKnown RBP21■□□□□ 0.95
HIF3A-208ENST00000524533 ECE1P42892 770 aa21■□□□□ 0.95
HIF3A-208ENST00000524533 MAP2K1Q02750 393 aaPredicted RBP21■□□□□ 0.95
HIF3A-208ENST00000524533 CCDC191Q8NCU4 936 aa21■□□□□ 0.95
HIF3A-208ENST00000524533 TRPM4Q8TD43 1214 aa21■□□□□ 0.95
HIF3A-208ENST00000524533 EYA3Q99504 573 aa21■□□□□ 0.95
HIF3A-208ENST00000524533 CHMP4AQ9BY43 222 aa21■□□□□ 0.95
HIF3A-208ENST00000524533 GLIS2Q9BZE0 524 aaPredicted RBP21■□□□□ 0.95
HIF3A-208ENST00000524533 POLLQ9UGP5 575 aa21■□□□□ 0.95
HIF3A-208ENST00000524533 CNOT7Q9UIV1 285 aaKnown RBP21■□□□□ 0.95
HIF3A-208ENST00000524533 TLL2Q9Y6L7 1015 aa21■□□□□ 0.95
HIF3A-208ENST00000524533 H7C1D1 291 aa20.99■□□□□ 0.95
HIF3A-208ENST00000524533 RPS8P62241 208 aaKnown RBP20.99■□□□□ 0.95
HIF3A-208ENST00000524533 GRM1Q13255 1194 aa20.99■□□□□ 0.95
HIF3A-208ENST00000524533 CCDC30Q5VVM6 783 aa20.99■□□□□ 0.95
HIF3A-208ENST00000524533 CYP4F22Q6NT55 531 aa20.99■□□□□ 0.95
HIF3A-208ENST00000524533 MICALL2Q8IY33 904 aa20.99■□□□□ 0.95
HIF3A-208ENST00000524533 ZC3H15Q8WU90 426 aaKnown RBP20.99■□□□□ 0.95
HIF3A-208ENST00000524533 PGAP2Q9UHJ9 254 aa20.99■□□□□ 0.95
HIF3A-208ENST00000524533 SHTN1A0MZ66 631 aa20.98■□□□□ 0.95
HIF3A-208ENST00000524533 PSMD14O00487 310 aa20.98■□□□□ 0.95
HIF3A-208ENST00000524533 ECE2O60344 883 aa20.98■□□□□ 0.95
HIF3A-208ENST00000524533 CELF2O95319 508 aaKnown RBP20.98■□□□□ 0.95
HIF3A-208ENST00000524533 PCCAP05165 728 aaPredicted RBP20.98■□□□□ 0.95
HIF3A-208ENST00000524533 LBX1P52954 281 aa20.98■□□□□ 0.95
HIF3A-208ENST00000524533 HIRAP54198 1017 aaPredicted RBP20.98■□□□□ 0.95
HIF3A-208ENST00000524533 CWC25Q9NXE8 425 aaPredicted RBP20.98■□□□□ 0.95
HIF3A-208ENST00000524533 ZBTB12Q9Y330 459 aaPredicted RBP20.98■□□□□ 0.95
HIF3A-208ENST00000524533 CCDC152Q4G0S7 254 aa20.97■□□□□ 0.95
HIF3A-208ENST00000524533 TBC1D16Q8TBP0 767 aa20.97■□□□□ 0.95
HIF3A-208ENST00000524533 DPF2Q92785 391 aa20.97■□□□□ 0.95
HIF3A-208ENST00000524533 GPR101Q96P66 508 aaPredicted RBP20.97■□□□□ 0.95
HIF3A-208ENST00000524533 METTL22Q9BUU2 404 aaPredicted RBP20.97■□□□□ 0.95
HIF3A-208ENST00000524533 SEC31BQ9NQW1 1179 aa20.97■□□□□ 0.95
HIF3A-208ENST00000524533 PDE8AO60658 829 aa20.96■□□□□ 0.95
HIF3A-208ENST00000524533 HSPA8P11142 646 aaKnown RBP20.96■□□□□ 0.95
HIF3A-208ENST00000524533 DOK7Q18PE1 504 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms