RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
TTC39A-213ENST00000524442 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
TTC39A-213ENST00000524442 SLX4Q8IY92 1834 aa12.82□□□□□ -0.36
TTC39A-213ENST00000524442 ZC3H4Q9UPT8 1303 aaKnown RBP12.82□□□□□ -0.36
TTC39A-213ENST00000524442 IPO8O15397 1037 aaKnown RBP12.81□□□□□ -0.36
TTC39A-213ENST00000524442 CASP7P55210 303 aa12.81□□□□□ -0.36
TTC39A-213ENST00000524442 CTSWP56202 376 aa12.81□□□□□ -0.36
TTC39A-213ENST00000524442 FKBP4Q02790 459 aaKnown RBP eCLIP12.81□□□□□ -0.36
TTC39A-213ENST00000524442 C9orf131Q5VYM1 1079 aa12.81□□□□□ -0.36
TTC39A-213ENST00000524442 SP8Q8IXZ3 490 aa12.81□□□□□ -0.36
TTC39A-213ENST00000524442 PSMD1Q99460 953 aa12.81□□□□□ -0.36
TTC39A-213ENST00000524442 DDX60Q8IY21 1712 aaKnown RBP12.81□□□□□ -0.36
TTC39A-213ENST00000524442 LAMB2P55268 1798 aa12.81□□□□□ -0.36
TTC39A-213ENST00000524442 GRM8O00222 908 aa12.8□□□□□ -0.36
TTC39A-213ENST00000524442 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
TTC39A-213ENST00000524442 C9orf78Q9NZ63 289 aaPredicted RBP12.8□□□□□ -0.36
TTC39A-213ENST00000524442 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
TTC39A-213ENST00000524442 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
TTC39A-213ENST00000524442 RTL9Q8NET4 1388 aa12.8□□□□□ -0.36
TTC39A-213ENST00000524442 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
TTC39A-213ENST00000524442 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
TTC39A-213ENST00000524442 RASSF7Q02833 373 aa12.79□□□□□ -0.36
TTC39A-213ENST00000524442 TTLL11Q8NHH1 800 aa12.79□□□□□ -0.36
TTC39A-213ENST00000524442 CDC5LQ99459 802 aaKnown RBP12.79□□□□□ -0.36
TTC39A-213ENST00000524442 VPS33BQ9H267 617 aa12.79□□□□□ -0.36
TTC39A-213ENST00000524442 UTYO14607 1347 aa12.79□□□□□ -0.36
TTC39A-213ENST00000524442 SNED1Q8TER0 1413 aa12.79□□□□□ -0.36
TTC39A-213ENST00000524442 CSF1RP07333 972 aa12.78□□□□□ -0.36
TTC39A-213ENST00000524442 ZNF784Q8NCA9 323 aaPredicted RBP12.78□□□□□ -0.36
TTC39A-213ENST00000524442 SUPT20HQ8NEM7 779 aa12.78□□□□□ -0.36
TTC39A-213ENST00000524442 CELF1Q92879 486 aaKnown RBP12.78□□□□□ -0.36
TTC39A-213ENST00000524442 FER1L6Q2WGJ9 1857 aa12.78□□□□□ -0.36
TTC39A-213ENST00000524442 OLFM4Q6UX06 510 aa12.77□□□□□ -0.37
TTC39A-213ENST00000524442 ANKRD18AQ8IVF6 992 aa12.77□□□□□ -0.37
TTC39A-213ENST00000524442 RTFDC1Q9BY42 306 aaPredicted RBP12.77□□□□□ -0.37
TTC39A-213ENST00000524442 SEC31BQ9NQW1 1179 aa12.77□□□□□ -0.37
TTC39A-213ENST00000524442 BCAR3O75815 825 aa12.76□□□□□ -0.37
TTC39A-213ENST00000524442 PRELPP51888 382 aa12.76□□□□□ -0.37
TTC39A-213ENST00000524442 DPP8Q6V1X1 898 aaPredicted RBP12.76□□□□□ -0.37
TTC39A-213ENST00000524442 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
TTC39A-213ENST00000524442 MPNDQ8N594 471 aa12.76□□□□□ -0.37
TTC39A-213ENST00000524442 GREM2Q9H772 168 aa12.76□□□□□ -0.37
TTC39A-213ENST00000524442 HDAC5Q9UQL6 1122 aa12.76□□□□□ -0.37
TTC39A-213ENST00000524442 CACNA1SQ13698 1873 aa12.76□□□□□ -0.37
TTC39A-213ENST00000524442 NBPF7P0C2Y1 421 aaPredicted RBP12.75□□□□□ -0.37
TTC39A-213ENST00000524442 IARSP41252 1262 aaKnown RBP12.75□□□□□ -0.37
TTC39A-213ENST00000524442 FOXO4P98177 505 aa12.75□□□□□ -0.37
TTC39A-213ENST00000524442 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
TTC39A-213ENST00000524442 CCDC85AQ96PX6 553 aaPredicted RBP12.75□□□□□ -0.37
TTC39A-213ENST00000524442 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
TTC39A-213ENST00000524442 ZNF277Q9NRM2 450 aaPredicted RBP12.75□□□□□ -0.37
TTC39A-213ENST00000524442 BSDC1Q9NW68 430 aaPredicted RBP12.75□□□□□ -0.37
TTC39A-213ENST00000524442 SBF1O95248 1867 aa12.74□□□□□ -0.37
TTC39A-213ENST00000524442 KDM2BQ8NHM5 1336 aa12.74□□□□□ -0.37
TTC39A-213ENST00000524442 ANKRD18BA2A2Z9 1011 aa12.74□□□□□ -0.37
TTC39A-213ENST00000524442 TRIM27P14373 513 aa12.74□□□□□ -0.37
TTC39A-213ENST00000524442 ITGA6P23229 1130 aa12.74□□□□□ -0.37
TTC39A-213ENST00000524442 IGHMBP2P38935 993 aaKnown RBP12.74□□□□□ -0.37
TTC39A-213ENST00000524442 ZKSCAN2Q63HK3 967 aa12.74□□□□□ -0.37
TTC39A-213ENST00000524442 DPY19L2Q6NUT2 758 aa12.74□□□□□ -0.37
TTC39A-213ENST00000524442 JDP2Q8WYK2 163 aa12.74□□□□□ -0.37
TTC39A-213ENST00000524442 FRAT1Q92837 279 aaPredicted RBP12.74□□□□□ -0.37
TTC39A-213ENST00000524442 GPBP1L1Q9HC44 474 aaPredicted RBP12.74□□□□□ -0.37
TTC39A-213ENST00000524442 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
TTC39A-213ENST00000524442 IFIT5Q13325 482 aaKnown RBP12.73□□□□□ -0.37
TTC39A-213ENST00000524442 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
TTC39A-213ENST00000524442 LMBR1LQ6UX01 489 aa12.73□□□□□ -0.37
TTC39A-213ENST00000524442 SUCLG2Q96I99 432 aa12.73□□□□□ -0.37
TTC39A-213ENST00000524442 MPHOSPH8Q99549 860 aa12.73□□□□□ -0.37
TTC39A-213ENST00000524442 NSFL1CQ9UNZ2 370 aaKnown RBP12.73□□□□□ -0.37
TTC39A-213ENST00000524442 LRRC37AA6NMS7 1700 aa12.73□□□□□ -0.37
TTC39A-213ENST00000524442 MYH3P11055 1940 aa12.72□□□□□ -0.37
TTC39A-213ENST00000524442 GLTPD2A6NH11 291 aa12.72□□□□□ -0.37
TTC39A-213ENST00000524442 KIAA2012Q0VF49 1180 aa12.72□□□□□ -0.37
TTC39A-213ENST00000524442 CCDC57Q2TAC2 916 aa12.72□□□□□ -0.37
TTC39A-213ENST00000524442 RABL6Q3YEC7 729 aaPredicted RBP12.72□□□□□ -0.37
TTC39A-213ENST00000524442 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
TTC39A-213ENST00000524442 LARGE2Q8N3Y3 721 aa12.72□□□□□ -0.37
TTC39A-213ENST00000524442 EYA3Q99504 573 aa12.72□□□□□ -0.37
TTC39A-213ENST00000524442 XDHP47989 1333 aa12.71□□□□□ -0.37
TTC39A-213ENST00000524442 FZD9O00144 591 aa12.71□□□□□ -0.37
TTC39A-213ENST00000524442 PPIP5K2O43314 1243 aa12.71□□□□□ -0.37
TTC39A-213ENST00000524442 UBTFL1P0CB47 393 aaPredicted RBP12.71□□□□□ -0.37
TTC39A-213ENST00000524442 MS4A1P11836 297 aa12.71□□□□□ -0.37
TTC39A-213ENST00000524442 GPSM2P81274 684 aa12.71□□□□□ -0.37
TTC39A-213ENST00000524442 KAZALD1Q96I82 304 aa12.71□□□□□ -0.37
TTC39A-213ENST00000524442 ANKIB1Q9P2G1 1089 aa12.71□□□□□ -0.37
TTC39A-213ENST00000524442 CHMP3Q9Y3E7 222 aa12.71□□□□□ -0.37
TTC39A-213ENST00000524442 GNAI3P08754 354 aa12.7□□□□□ -0.38
TTC39A-213ENST00000524442 ATP2B4P23634 1241 aa12.7□□□□□ -0.38
TTC39A-213ENST00000524442 WASHC4Q2M389 1173 aa12.7□□□□□ -0.38
TTC39A-213ENST00000524442 SLC51AQ86UW1 340 aa12.7□□□□□ -0.38
TTC39A-213ENST00000524442 NIM1KQ8IY84 436 aa12.7□□□□□ -0.38
TTC39A-213ENST00000524442 TBC1D16Q8TBP0 767 aa12.7□□□□□ -0.38
TTC39A-213ENST00000524442 ANKRD2Q9GZV1 360 aa12.7□□□□□ -0.38
TTC39A-213ENST00000524442 BICC1Q9H694 974 aaKnown RBP12.7□□□□□ -0.38
TTC39A-213ENST00000524442 POLLQ9UGP5 575 aa12.7□□□□□ -0.38
TTC39A-213ENST00000524442 GGA1Q9UJY5 639 aa12.7□□□□□ -0.38
TTC39A-213ENST00000524442 RCAN3Q9UKA8 241 aa12.7□□□□□ -0.38
TTC39A-213ENST00000524442 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms