RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 IFT57Q9NWB7 429 aa24.41■■□□□ 1.5
PTP4A3-206ENST00000524028 CNTNAP1P78357 1384 aa24.41■■□□□ 1.5
PTP4A3-206ENST00000524028 ELL2O00472 640 aaPredicted RBP24.4■■□□□ 1.5
PTP4A3-206ENST00000524028 LMOD1P29536 600 aaPredicted RBP24.4■■□□□ 1.5
PTP4A3-206ENST00000524028 SUPT20HQ8NEM7 779 aa24.4■■□□□ 1.5
PTP4A3-206ENST00000524028 CXCL9Q07325 125 aa24.39■■□□□ 1.49
PTP4A3-206ENST00000524028 PHAXQ9H814 394 aaKnown RBP24.39■■□□□ 1.49
PTP4A3-206ENST00000524028 ZNRF3Q9ULT6 936 aa24.39■■□□□ 1.49
PTP4A3-206ENST00000524028 GNAI1P63096 354 aa24.38■■□□□ 1.49
PTP4A3-206ENST00000524028 CCDC184Q52MB2 194 aa24.38■■□□□ 1.49
PTP4A3-206ENST00000524028 RTL5Q5HYW3 569 aaPredicted RBP24.38■■□□□ 1.49
PTP4A3-206ENST00000524028 KIAA2012Q0VF49 1180 aa24.37■■□□□ 1.49
PTP4A3-206ENST00000524028 TRIM28Q13263 835 aaKnown RBP24.37■■□□□ 1.49
PTP4A3-206ENST00000524028 SF3B3Q15393 1217 aaKnown RBP24.37■■□□□ 1.49
PTP4A3-206ENST00000524028 C8orf58Q8NAV2 365 aa24.37■■□□□ 1.49
PTP4A3-206ENST00000524028 VEGFBP49765 207 aa24.36■■□□□ 1.49
PTP4A3-206ENST00000524028 FMR1Q06787 632 aaKnown RBP eCLIP24.36■■□□□ 1.49
PTP4A3-206ENST00000524028 CELF1Q92879 486 aaKnown RBP24.36■■□□□ 1.49
PTP4A3-206ENST00000524028 DDX60Q8IY21 1712 aaKnown RBP24.35■■□□□ 1.49
PTP4A3-206ENST00000524028 CALD1Q05682 793 aaKnown RBP24.35■■□□□ 1.49
PTP4A3-206ENST00000524028 USP50Q70EL3 339 aaPredicted RBP24.35■■□□□ 1.49
PTP4A3-206ENST00000524028 RIC3Q7Z5B4 369 aa24.35■■□□□ 1.49
PTP4A3-206ENST00000524028 GPRC5DQ9NZD1 345 aa24.35■■□□□ 1.49
PTP4A3-206ENST00000524028 TAF1P21675 1872 aa24.34■■□□□ 1.49
PTP4A3-206ENST00000524028 COL4A1P02462 1669 aa24.34■■□□□ 1.49
PTP4A3-206ENST00000524028 TMC4Q7Z404 712 aa24.34■■□□□ 1.49
PTP4A3-206ENST00000524028 DUOX1Q9NRD9 1551 aa24.33■■□□□ 1.49
PTP4A3-206ENST00000524028 IRS4O14654 1257 aaPredicted RBP24.33■■□□□ 1.49
PTP4A3-206ENST00000524028 GMPSP49915 693 aaPredicted RBP24.33■■□□□ 1.49
PTP4A3-206ENST00000524028 GOLGA2Q08379 1002 aa24.33■■□□□ 1.49
PTP4A3-206ENST00000524028 YDJCA8MPS7 323 aa24.32■■□□□ 1.48
PTP4A3-206ENST00000524028 RAD17O75943 681 aa24.32■■□□□ 1.48
PTP4A3-206ENST00000524028 CIAPIN1Q6FI81 312 aa24.32■■□□□ 1.48
PTP4A3-206ENST00000524028 RASSF10A6NK89 507 aa24.31■■□□□ 1.48
PTP4A3-206ENST00000524028 TNS4Q8IZW8 715 aa24.31■■□□□ 1.48
PTP4A3-206ENST00000524028 TSPYL6Q8N831 410 aa24.31■■□□□ 1.48
PTP4A3-206ENST00000524028 ZBTB38Q8NAP3 1195 aaPredicted RBP24.31■■□□□ 1.48
PTP4A3-206ENST00000524028 MYD88Q99836 296 aa24.31■■□□□ 1.48
PTP4A3-206ENST00000524028 ADARB2Q9NS39 739 aaKnown RBP24.31■■□□□ 1.48
PTP4A3-206ENST00000524028 TRAF5O00463 557 aa24.3■■□□□ 1.48
PTP4A3-206ENST00000524028 GPSM2P81274 684 aa24.3■■□□□ 1.48
PTP4A3-206ENST00000524028 NSFL1CQ9UNZ2 370 aaKnown RBP24.3■■□□□ 1.48
PTP4A3-206ENST00000524028 LRRC37AA6NMS7 1700 aa24.3■■□□□ 1.48
PTP4A3-206ENST00000524028 FOXN1O15353 648 aa24.29■■□□□ 1.48
PTP4A3-206ENST00000524028 DEFB115Q30KQ5 88 aa24.29■■□□□ 1.48
PTP4A3-206ENST00000524028 POLLQ9UGP5 575 aa24.29■■□□□ 1.48
PTP4A3-206ENST00000524028 TNIP1Q15025 636 aa24.28■■□□□ 1.48
PTP4A3-206ENST00000524028 WASHC4Q2M389 1173 aa24.28■■□□□ 1.48
PTP4A3-206ENST00000524028 CST9Q5W186 159 aa24.28■■□□□ 1.48
PTP4A3-206ENST00000524028 JARID2Q92833 1246 aaPredicted RBP24.28■■□□□ 1.48
PTP4A3-206ENST00000524028 TSR2Q969E8 191 aaKnown RBP24.28■■□□□ 1.48
PTP4A3-206ENST00000524028 ABT1Q9ULW3 272 aaKnown RBP24.28■■□□□ 1.48
PTP4A3-206ENST00000524028 SHTN1A0MZ66 631 aa24.27■■□□□ 1.48
PTP4A3-206ENST00000524028 HIRAP54198 1017 aaPredicted RBP24.27■■□□□ 1.48
PTP4A3-206ENST00000524028 RPS8P62241 208 aaKnown RBP24.27■■□□□ 1.48
PTP4A3-206ENST00000524028 SEC31BQ9NQW1 1179 aa24.27■■□□□ 1.48
PTP4A3-206ENST00000524028 RIMBP2O15034 1052 aa24.26■■□□□ 1.47
PTP4A3-206ENST00000524028 CCDC30Q5VVM6 783 aa24.26■■□□□ 1.47
PTP4A3-206ENST00000524028 CCDC191Q8NCU4 936 aa24.26■■□□□ 1.47
PTP4A3-206ENST00000524028 METTL22Q9BUU2 404 aaPredicted RBP24.26■■□□□ 1.47
PTP4A3-206ENST00000524028 BCL2L13Q9BXK5 485 aa24.26■■□□□ 1.47
PTP4A3-206ENST00000524028 C6orf229H3BNL8 230 aa24.25■■□□□ 1.47
PTP4A3-206ENST00000524028 PCCAP05165 728 aaPredicted RBP24.25■■□□□ 1.47
PTP4A3-206ENST00000524028 GPR101Q96P66 508 aaPredicted RBP24.25■■□□□ 1.47
PTP4A3-206ENST00000524028 DBNDD1Q9H9R9 158 aa24.25■■□□□ 1.47
PTP4A3-206ENST00000524028 PGAP2Q9UHJ9 254 aa24.25■■□□□ 1.47
PTP4A3-206ENST00000524028 CDHR2Q9BYE9 1310 aa24.25■■□□□ 1.47
PTP4A3-206ENST00000524028 WWC1Q8IX03 1113 aa24.24■■□□□ 1.47
PTP4A3-206ENST00000524028 TRPM4Q8TD43 1214 aa24.24■■□□□ 1.47
PTP4A3-206ENST00000524028 KCNQ5Q9NR82 932 aa24.24■■□□□ 1.47
PTP4A3-206ENST00000524028 WBP1LQ9NX94 342 aa24.24■■□□□ 1.47
PTP4A3-206ENST00000524028 CWC25Q9NXE8 425 aaPredicted RBP24.24■■□□□ 1.47
PTP4A3-206ENST00000524028 CNOT7Q9UIV1 285 aaKnown RBP24.24■■□□□ 1.47
PTP4A3-206ENST00000524028 ZBTB12Q9Y330 459 aaPredicted RBP24.24■■□□□ 1.47
PTP4A3-206ENST00000524028 WDR33Q9C0J8 1336 aaKnown RBP24.24■■□□□ 1.47
PTP4A3-206ENST00000524028 CAPN15O75808 1086 aa24.23■■□□□ 1.47
PTP4A3-206ENST00000524028 CCDC27Q2M243 656 aa24.23■■□□□ 1.47
PTP4A3-206ENST00000524028 TBC1D16Q8TBP0 767 aa24.23■■□□□ 1.47
PTP4A3-206ENST00000524028 MAP3K2Q9Y2U5 619 aa24.23■■□□□ 1.47
PTP4A3-206ENST00000524028 PSMD14O00487 310 aa24.22■■□□□ 1.47
PTP4A3-206ENST00000524028 PDE8AO60658 829 aa24.22■■□□□ 1.47
PTP4A3-206ENST00000524028 DDX58O95786 925 aaKnown RBP24.22■■□□□ 1.47
PTP4A3-206ENST00000524028 DOK7Q18PE1 504 aa24.22■■□□□ 1.47
PTP4A3-206ENST00000524028 CCDC85AQ96PX6 553 aaPredicted RBP24.22■■□□□ 1.47
PTP4A3-206ENST00000524028 GLIS2Q9BZE0 524 aaPredicted RBP24.22■■□□□ 1.47
PTP4A3-206ENST00000524028 MICALL2Q8IY33 904 aa24.21■■□□□ 1.47
PTP4A3-206ENST00000524028 CHMP4AQ9BY43 222 aa24.21■■□□□ 1.47
PTP4A3-206ENST00000524028 PODXL2Q9NZ53 605 aa24.21■■□□□ 1.47
PTP4A3-206ENST00000524028 PI4KAP2A4QPH2 592 aa24.2■■□□□ 1.46
PTP4A3-206ENST00000524028 ECE2O60344 883 aa24.2■■□□□ 1.46
PTP4A3-206ENST00000524028 IGKV5-2P06315 115 aa24.2■■□□□ 1.46
PTP4A3-206ENST00000524028 HSP90B1P14625 803 aaKnown RBP24.2■■□□□ 1.46
PTP4A3-206ENST00000524028 CCDC152Q4G0S7 254 aa24.2■■□□□ 1.46
PTP4A3-206ENST00000524028 KSR2Q6VAB6 950 aa24.2■■□□□ 1.46
PTP4A3-206ENST00000524028 PI4KAP1Q8N8J0 262 aa24.2■■□□□ 1.46
PTP4A3-206ENST00000524028 AIDAQ96BJ3 306 aa24.2■■□□□ 1.46
PTP4A3-206ENST00000524028 EYA3Q99504 573 aa24.2■■□□□ 1.46
PTP4A3-206ENST00000524028 TLL2Q9Y6L7 1015 aa24.2■■□□□ 1.46
PTP4A3-206ENST00000524028 RTL9Q8NET4 1388 aa24.19■■□□□ 1.46
PTP4A3-206ENST00000524028 H7C1D1 291 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms